RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 CEP170Q5SW79 1584 aa35.59■■■■□ 3.29
UBE3C-209ENST00000611269 NUP160Q12769 1436 aa35.56■■■■□ 3.28
UBE3C-209ENST00000611269 KIAA0586Q9BVV6 1533 aa35.46■■■■□ 3.27
UBE3C-209ENST00000611269 IQGAP2Q13576 1575 aa35.45■■■■□ 3.26
UBE3C-209ENST00000611269 RANGAP1P46060 587 aaPredicted RBP35.44■■■■□ 3.26
UBE3C-209ENST00000611269 CEP162Q5TB80 1403 aa35.43■■■■□ 3.26
UBE3C-209ENST00000611269 CLIP1P30622 1438 aa35.33■■■■□ 3.25
UBE3C-209ENST00000611269 CLASP1Q7Z460 1538 aa35.32■■■■□ 3.24
UBE3C-209ENST00000611269 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
UBE3C-209ENST00000611269 UGGT2Q9NYU1 1516 aa35.26■■■■□ 3.24
UBE3C-209ENST00000611269 JPH4Q96JJ6 628 aa35.24■■■■□ 3.23
UBE3C-209ENST00000611269 ARHGAP35Q9NRY4 1499 aa35.23■■■■□ 3.23
UBE3C-209ENST00000611269 SAMD9Q5K651 1589 aa35.19■■■■□ 3.22
UBE3C-209ENST00000611269 EFCAB5A4FU69 1503 aa35.19■■■■□ 3.22
UBE3C-209ENST00000611269 SHROOM2Q13796 1616 aa35.19■■■■□ 3.22
UBE3C-209ENST00000611269 P3H3Q8IVL6 736 aa35.14■■■■□ 3.22
UBE3C-209ENST00000611269 DISP1Q96F81 1524 aa35.13■■■■□ 3.21
UBE3C-209ENST00000611269 ARAP1Q96P48 1450 aa35.1■■■■□ 3.21
UBE3C-209ENST00000611269 KIAA0556O60303 1618 aa35.1■■■■□ 3.21
UBE3C-209ENST00000611269 PRG4Q92954 1404 aaPredicted RBP35.09■■■■□ 3.21
UBE3C-209ENST00000611269 FHOD3Q2V2M9 1422 aa35.08■■■■□ 3.21
UBE3C-209ENST00000611269 CARMIL2Q6F5E8 1435 aa35.05■■■■□ 3.2
UBE3C-209ENST00000611269 ERCC6L2Q5T890 1561 aa35■■■■□ 3.19
UBE3C-209ENST00000611269 VPS8Q8N3P4 1428 aa34.91■■■■□ 3.18
UBE3C-209ENST00000611269 PCGF6Q9BYE7 350 aa34.9■■■■□ 3.18
UBE3C-209ENST00000611269 TTBK1Q5TCY1 1321 aaPredicted RBP34.88■■■■□ 3.17
UBE3C-209ENST00000611269 FMN1Q68DA7 1419 aa34.86■■■■□ 3.17
UBE3C-209ENST00000611269 TRIM26Q12899 539 aaPredicted RBP34.8■■■■□ 3.16
UBE3C-209ENST00000611269 PTPRGP23470 1445 aa34.78■■■■□ 3.16
UBE3C-209ENST00000611269 PCF11O94913 1555 aaKnown RBP34.77■■■■□ 3.16
UBE3C-209ENST00000611269 ARHGEF11O15085 1522 aa34.76■■■■□ 3.15
UBE3C-209ENST00000611269 CASKIN1Q8WXD9 1431 aa34.71■■■■□ 3.15
UBE3C-209ENST00000611269 PLB1Q6P1J6 1458 aa34.69■■■■□ 3.14
UBE3C-209ENST00000611269 FYCO1Q9BQS8 1478 aa34.68■■■■□ 3.14
UBE3C-209ENST00000611269 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
UBE3C-209ENST00000611269 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
UBE3C-209ENST00000611269 RAPGEF6Q8TEU7 1601 aa34.66■■■■□ 3.14
UBE3C-209ENST00000611269 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
UBE3C-209ENST00000611269 ATP1B4Q9UN42 357 aaPredicted RBP34.66■■■■□ 3.14
UBE3C-209ENST00000611269 ABCA8O94911 1581 aa34.64■■■■□ 3.14
UBE3C-209ENST00000611269 HECW1Q76N89 1606 aa34.61■■■■□ 3.13
UBE3C-209ENST00000611269 UACAQ9BZF9 1416 aa34.58■■■■□ 3.13
UBE3C-209ENST00000611269 LRRIQ1Q96JM4 1722 aa34.57■■■■□ 3.12
UBE3C-209ENST00000611269 NUP153P49790 1475 aaKnown RBP34.56■■■■□ 3.12
UBE3C-209ENST00000611269 APLP2Q06481 763 aa34.51■■■■□ 3.12
UBE3C-209ENST00000611269 ABCC2Q92887 1545 aa34.5■■■■□ 3.11
UBE3C-209ENST00000611269 ARID3CA6NKF2 412 aa34.5■■■■□ 3.11
UBE3C-209ENST00000611269 EPRSP07814 1512 aaKnown RBP34.49■■■■□ 3.11
UBE3C-209ENST00000611269 UHRF1BP1LA0JNW5 1464 aa34.46■■■■□ 3.11
UBE3C-209ENST00000611269 TIAM1Q13009 1591 aa34.45■■■■□ 3.11
UBE3C-209ENST00000611269 CCDC18Q5T9S5 1454 aa34.45■■■■□ 3.11
UBE3C-209ENST00000611269 CFAP43Q8NDM7 1665 aa34.45■■■■□ 3.1
UBE3C-209ENST00000611269 CDK13Q14004 1512 aaKnown RBP34.45■■■■□ 3.1
UBE3C-209ENST00000611269 ADCY10Q96PN6 1610 aa34.45■■■■□ 3.1
UBE3C-209ENST00000611269 MAP3K1Q13233 1512 aa34.42■■■■□ 3.1
UBE3C-209ENST00000611269 CYB5RLQ6IPT4 315 aa34.41■■■■□ 3.1
UBE3C-209ENST00000611269 PPARGC1BQ86YN6 1023 aaKnown RBP34.39■■■■□ 3.1
UBE3C-209ENST00000611269 ATP10BO94823 1461 aa34.37■■■■□ 3.09
UBE3C-209ENST00000611269 HRCP23327 699 aa34.36■■■■□ 3.09
UBE3C-209ENST00000611269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.35■■■■□ 3.09
UBE3C-209ENST00000611269 HNRNPUL2Q1KMD3 747 aaKnown RBP34.35■■■■□ 3.09
UBE3C-209ENST00000611269 KANK4Q5T7N3 995 aaPredicted RBP34.34■■■■□ 3.09
UBE3C-209ENST00000611269 DNAJC5Q9H3Z4 198 aa34.33■■■■□ 3.09
UBE3C-209ENST00000611269 KDM5BQ9UGL1 1544 aa34.32■■■■□ 3.08
UBE3C-209ENST00000611269 ZCCHC11Q5TAX3 1644 aaKnown RBP34.3■■■■□ 3.08
UBE3C-209ENST00000611269 LRRC9Q6ZRR7 1453 aa34.29■■■■□ 3.08
UBE3C-209ENST00000611269 MAGI3Q5TCQ9 1506 aa34.27■■■■□ 3.08
UBE3C-209ENST00000611269 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
UBE3C-209ENST00000611269 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
UBE3C-209ENST00000611269 EHBP1L1Q8N3D4 1523 aa34.19■■■■□ 3.06
UBE3C-209ENST00000611269 NPM1P06748 294 aaKnown RBP eCLIP34.16■■■■□ 3.06
UBE3C-209ENST00000611269 PLEKHD1A6NEE1 506 aa34.15■■■■□ 3.06
UBE3C-209ENST00000611269 TROQ12816 1431 aaPredicted RBP34.13■■■■□ 3.05
UBE3C-209ENST00000611269 SUPT6HQ7KZ85 1726 aaKnown RBP34.07■■■■□ 3.04
UBE3C-209ENST00000611269 ASXL2Q76L83 1435 aa34.04■■■■□ 3.04
UBE3C-209ENST00000611269 KIF14Q15058 1648 aa34.03■■■■□ 3.04
UBE3C-209ENST00000611269 WDR7Q9Y4E6 1490 aa34.02■■■■□ 3.04
UBE3C-209ENST00000611269 NCOA2Q15596 1464 aa34.02■■■■□ 3.04
UBE3C-209ENST00000611269 MAPKBP1O60336 1514 aa33.98■■■■□ 3.03
UBE3C-209ENST00000611269 KCNH8Q96L42 1107 aa33.96■■■■□ 3.03
UBE3C-209ENST00000611269 PHLDB1Q86UU1 1377 aa33.94■■■■□ 3.02
UBE3C-209ENST00000611269 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
UBE3C-209ENST00000611269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.87■■■■□ 3.012e-8■■■□□ 16.4
UBE3C-209ENST00000611269 TTC37Q6PGP7 1564 aa33.85■■■■□ 3.01
UBE3C-209ENST00000611269 CCNB3Q8WWL7 1395 aa33.84■■■■□ 3.01
UBE3C-209ENST00000611269 MYOM3Q5VTT5 1437 aa33.82■■■■□ 3
UBE3C-209ENST00000611269 CDC42BPAQ5VT25 1732 aa33.79■■■■□ 3
UBE3C-209ENST00000611269 GPATCH8Q9UKJ3 1502 aaKnown RBP33.78■■■■□ 3
UBE3C-209ENST00000611269 ABCA9Q8IUA7 1624 aa33.77■■■■□ 3
UBE3C-209ENST00000611269 ITSN2Q9NZM3 1697 aa33.76■■■■□ 3
UBE3C-209ENST00000611269 FGD6Q6ZV73 1430 aa33.74■■■□□ 2.99
UBE3C-209ENST00000611269 RRBP1Q9P2E9 1410 aaKnown RBP33.74■■■□□ 2.99
UBE3C-209ENST00000611269 MYO5CQ9NQX4 1742 aa33.74■■■□□ 2.99
UBE3C-209ENST00000611269 PREX2Q70Z35 1606 aa33.71■■■□□ 2.99
UBE3C-209ENST00000611269 DIP2BQ9P265 1576 aa33.71■■■□□ 2.99
UBE3C-209ENST00000611269 ZEB1P37275 1124 aaPredicted RBP33.7■■■□□ 2.99
UBE3C-209ENST00000611269 CDC42BPBQ9Y5S2 1711 aa33.69■■■□□ 2.98
UBE3C-209ENST00000611269 MIA2Q96PC5 1412 aa33.68■■■□□ 2.98
UBE3C-209ENST00000611269 CFDP1Q9UEE9 299 aaPredicted RBP33.67■■■□□ 2.98
UBE3C-209ENST00000611269 GLI2P10070 1586 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms