RNA–Protein interactions for RNA: ENST00000611198.4

TSC22D1-212, Transcript of TSC22 domain family member 1, humanhuman

TSL 2 BASIC

Gene TSC22D1, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-212ENST00000611198 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
TSC22D1-212ENST00000611198 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
TSC22D1-212ENST00000611198 CEP164Q9UPV0 1460 aa11.44□□□□□ -0.58
TSC22D1-212ENST00000611198 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
TSC22D1-212ENST00000611198 ANP32CO43423 234 aa11.43□□□□□ -0.58
TSC22D1-212ENST00000611198 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
TSC22D1-212ENST00000611198 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
TSC22D1-212ENST00000611198 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
TSC22D1-212ENST00000611198 SIN3AQ96ST3 1273 aa11.4□□□□□ -0.58
TSC22D1-212ENST00000611198 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
TSC22D1-212ENST00000611198 KIF21BO75037 1637 aa11.39□□□□□ -0.59
TSC22D1-212ENST00000611198 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
TSC22D1-212ENST00000611198 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
TSC22D1-212ENST00000611198 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
TSC22D1-212ENST00000611198 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
TSC22D1-212ENST00000611198 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
TSC22D1-212ENST00000611198 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
TSC22D1-212ENST00000611198 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
TSC22D1-212ENST00000611198 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
TSC22D1-212ENST00000611198 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
TSC22D1-212ENST00000611198 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
TSC22D1-212ENST00000611198 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
TSC22D1-212ENST00000611198 MAPKBP1O60336 1514 aa11.32□□□□□ -0.6
TSC22D1-212ENST00000611198 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
TSC22D1-212ENST00000611198 PPP4R2Q9NY27 417 aa11.31□□□□□ -0.6
TSC22D1-212ENST00000611198 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
TSC22D1-212ENST00000611198 RRBP1Q9P2E9 1410 aaKnown RBP11.3□□□□□ -0.6
TSC22D1-212ENST00000611198 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
TSC22D1-212ENST00000611198 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
TSC22D1-212ENST00000611198 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
TSC22D1-212ENST00000611198 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
TSC22D1-212ENST00000611198 SYNJ1O43426 1573 aa11.27□□□□□ -0.61
TSC22D1-212ENST00000611198 CUX2O14529 1486 aa11.27□□□□□ -0.61
TSC22D1-212ENST00000611198 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
TSC22D1-212ENST00000611198 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
TSC22D1-212ENST00000611198 ANP32AP39687 249 aaKnown RBP11.21□□□□□ -0.61
TSC22D1-212ENST00000611198 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
TSC22D1-212ENST00000611198 SETD5Q9C0A6 1442 aa11.21□□□□□ -0.61
TSC22D1-212ENST00000611198 IPO9Q96P70 1041 aaKnown RBP11.2□□□□□ -0.62
TSC22D1-212ENST00000611198 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
TSC22D1-212ENST00000611198 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
TSC22D1-212ENST00000611198 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
TSC22D1-212ENST00000611198 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
TSC22D1-212ENST00000611198 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
TSC22D1-212ENST00000611198 LAS1LQ9Y4W2 734 aaKnown RBP11.17□□□□□ -0.62
TSC22D1-212ENST00000611198 TONSLQ96HA7 1378 aa11.15□□□□□ -0.62
TSC22D1-212ENST00000611198 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
TSC22D1-212ENST00000611198 PEG3Q9GZU2 1588 aa11.14□□□□□ -0.63
TSC22D1-212ENST00000611198 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
TSC22D1-212ENST00000611198 NEFMP07197 916 aa11.13□□□□□ -0.63
TSC22D1-212ENST00000611198 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
TSC22D1-212ENST00000611198 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
TSC22D1-212ENST00000611198 BRPF3Q9ULD4 1205 aa11.1□□□□□ -0.63
TSC22D1-212ENST00000611198 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
TSC22D1-212ENST00000611198 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
TSC22D1-212ENST00000611198 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
TSC22D1-212ENST00000611198 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
TSC22D1-212ENST00000611198 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
TSC22D1-212ENST00000611198 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
TSC22D1-212ENST00000611198 CNKSR2Q8WXI2 1034 aa11.08□□□□□ -0.64
TSC22D1-212ENST00000611198 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
TSC22D1-212ENST00000611198 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
TSC22D1-212ENST00000611198 ZBED9Q6R2W3 1325 aa11.06□□□□□ -0.64
TSC22D1-212ENST00000611198 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
TSC22D1-212ENST00000611198 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
TSC22D1-212ENST00000611198 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
TSC22D1-212ENST00000611198 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.64
TSC22D1-212ENST00000611198 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
TSC22D1-212ENST00000611198 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
TSC22D1-212ENST00000611198 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
TSC22D1-212ENST00000611198 TIAM1Q13009 1591 aa11□□□□□ -0.65
TSC22D1-212ENST00000611198 LRRC9Q6ZRR7 1453 aa10.99□□□□□ -0.65
TSC22D1-212ENST00000611198 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
TSC22D1-212ENST00000611198 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
TSC22D1-212ENST00000611198 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
TSC22D1-212ENST00000611198 CNTLNQ9NXG0 1405 aa10.98□□□□□ -0.65
TSC22D1-212ENST00000611198 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
TSC22D1-212ENST00000611198 TOP2BQ02880 1626 aa10.97□□□□□ -0.65
TSC22D1-212ENST00000611198 GSE1Q14687 1217 aa10.97□□□□□ -0.65
TSC22D1-212ENST00000611198 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
TSC22D1-212ENST00000611198 HMGXB3Q12766 1538 aa10.96□□□□□ -0.65
TSC22D1-212ENST00000611198 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.66
TSC22D1-212ENST00000611198 PDE4AP27815 886 aa10.96□□□□□ -0.66
TSC22D1-212ENST00000611198 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
TSC22D1-212ENST00000611198 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
TSC22D1-212ENST00000611198 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
TSC22D1-212ENST00000611198 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
TSC22D1-212ENST00000611198 PKNOX2Q96KN3 472 aa10.94□□□□□ -0.66
TSC22D1-212ENST00000611198 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
TSC22D1-212ENST00000611198 SKAP1Q86WV1 359 aa10.93□□□□□ -0.66
TSC22D1-212ENST00000611198 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
TSC22D1-212ENST00000611198 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
TSC22D1-212ENST00000611198 NFKBIBQ15653 356 aa10.91□□□□□ -0.66
TSC22D1-212ENST00000611198 CCDC7Q96M83 1385 aa10.91□□□□□ -0.66
TSC22D1-212ENST00000611198 NCOA2Q15596 1464 aa10.91□□□□□ -0.66
TSC22D1-212ENST00000611198 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
TSC22D1-212ENST00000611198 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
TSC22D1-212ENST00000611198 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
TSC22D1-212ENST00000611198 AQRO60306 1485 aaKnown RBP eCLIP10.9□□□□□ -0.663e-6■■■□□ 15.7
TSC22D1-212ENST00000611198 CC2D2AQ9P2K1 1620 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms