RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 RRBP1Q9P2E9 1410 aaKnown RBP35.75■■■■□ 3.31
HOXA4-204ENST00000610970 CTTNBP2Q8WZ74 1663 aa35.73■■■■□ 3.31
HOXA4-204ENST00000610970 WDR62O43379 1518 aa35.72■■■■□ 3.31
HOXA4-204ENST00000610970 TIAM1Q13009 1591 aa35.69■■■■□ 3.3
HOXA4-204ENST00000610970 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
HOXA4-204ENST00000610970 TARBP1Q13395 1621 aaKnown RBP35.6■■■■□ 3.29
HOXA4-204ENST00000610970 AQRO60306 1485 aaKnown RBP eCLIP35.58■■■■□ 3.29
HOXA4-204ENST00000610970 CFAP43Q8NDM7 1665 aa35.56■■■■□ 3.28
HOXA4-204ENST00000610970 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
HOXA4-204ENST00000610970 CCNB3Q8WWL7 1395 aa35.54■■■■□ 3.28
HOXA4-204ENST00000610970 LRRC9Q6ZRR7 1453 aa35.52■■■■□ 3.28
HOXA4-204ENST00000610970 CLSPNQ9HAW4 1339 aa35.52■■■■□ 3.28
HOXA4-204ENST00000610970 FYCO1Q9BQS8 1478 aa35.52■■■■□ 3.28
HOXA4-204ENST00000610970 PCF11O94913 1555 aaKnown RBP35.51■■■■□ 3.27
HOXA4-204ENST00000610970 CASKIN1Q8WXD9 1431 aa35.47■■■■□ 3.27
HOXA4-204ENST00000610970 FMN1Q68DA7 1419 aa35.45■■■■□ 3.27
HOXA4-204ENST00000610970 FHOD3Q2V2M9 1422 aa35.43■■■■□ 3.26
HOXA4-204ENST00000610970 SAMD9Q5K651 1589 aa35.41■■■■□ 3.26
HOXA4-204ENST00000610970 PBRM1Q86U86 1689 aa35.38■■■■□ 3.25
HOXA4-204ENST00000610970 IFT140Q96RY7 1462 aa35.34■■■■□ 3.25
HOXA4-204ENST00000610970 P3H3Q8IVL6 736 aa35.33■■■■□ 3.25
HOXA4-204ENST00000610970 DHX57Q6P158 1386 aaKnown RBP35.29■■■■□ 3.24
HOXA4-204ENST00000610970 SNAPC4Q5SXM2 1469 aa35.26■■■■□ 3.23
HOXA4-204ENST00000610970 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
HOXA4-204ENST00000610970 GRIN2BQ13224 1484 aa35.24■■■■□ 3.23
HOXA4-204ENST00000610970 ZNF316A6NFI3 1004 aaPredicted RBP35.23■■■■□ 3.23
HOXA4-204ENST00000610970 PHLDB1Q86UU1 1377 aa35.21■■■■□ 3.23
HOXA4-204ENST00000610970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.2■■■■□ 3.23
HOXA4-204ENST00000610970 ZNF608Q9ULD9 1512 aaPredicted RBP35.2■■■■□ 3.23
HOXA4-204ENST00000610970 DIEXFQ68CQ4 756 aaKnown RBP35.18■■■■□ 3.22
HOXA4-204ENST00000610970 ATP1B4Q9UN42 357 aaPredicted RBP35.14■■■■□ 3.22
HOXA4-204ENST00000610970 IQGAP2Q13576 1575 aa35.1■■■■□ 3.21
HOXA4-204ENST00000610970 EIF4G3O43432 1585 aaKnown RBP35.05■■■■□ 3.2
HOXA4-204ENST00000610970 SETD5Q9C0A6 1442 aa35.04■■■■□ 3.2
HOXA4-204ENST00000610970 RAB3GAP2Q9H2M9 1393 aa35■■■■□ 3.19
HOXA4-204ENST00000610970 CCDC18Q5T9S5 1454 aa35■■■■□ 3.19
HOXA4-204ENST00000610970 LRRIQ1Q96JM4 1722 aa35■■■■□ 3.19
HOXA4-204ENST00000610970 MTUS2Q5JR59 1369 aa35■■■■□ 3.19
HOXA4-204ENST00000610970 ITGAEP38570 1179 aa34.98■■■■□ 3.19
HOXA4-204ENST00000610970 UGGT2Q9NYU1 1516 aa34.97■■■■□ 3.19
HOXA4-204ENST00000610970 EHBP1L1Q8N3D4 1523 aa34.96■■■■□ 3.19
HOXA4-204ENST00000610970 FAM50AQ14320 339 aaKnown RBP34.95■■■■□ 3.19
HOXA4-204ENST00000610970 FGD6Q6ZV73 1430 aa34.94■■■■□ 3.18
HOXA4-204ENST00000610970 HECW1Q76N89 1606 aa34.94■■■■□ 3.18
HOXA4-204ENST00000610970 SUPT6HQ7KZ85 1726 aaKnown RBP34.92■■■■□ 3.18
HOXA4-204ENST00000610970 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
HOXA4-204ENST00000610970 KIAA0586Q9BVV6 1533 aa34.88■■■■□ 3.17
HOXA4-204ENST00000610970 NCOA2Q15596 1464 aa34.85■■■■□ 3.17
HOXA4-204ENST00000610970 MYOM3Q5VTT5 1437 aa34.83■■■■□ 3.17
HOXA4-204ENST00000610970 MAGI1Q96QZ7 1491 aaPredicted RBP34.82■■■■□ 3.16
HOXA4-204ENST00000610970 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
HOXA4-204ENST00000610970 GRIN2AQ12879 1464 aa34.8■■■■□ 3.16
HOXA4-204ENST00000610970 MAPKBP1O60336 1514 aa34.79■■■■□ 3.16
HOXA4-204ENST00000610970 EPRSP07814 1512 aaKnown RBP34.75■■■■□ 3.15
HOXA4-204ENST00000610970 KIAA0556O60303 1618 aa34.72■■■■□ 3.15
HOXA4-204ENST00000610970 MAGI3Q5TCQ9 1506 aa34.69■■■■□ 3.14
HOXA4-204ENST00000610970 DISP1Q96F81 1524 aa34.67■■■■□ 3.14
HOXA4-204ENST00000610970 SYNJ2O15056 1496 aa34.67■■■■□ 3.14
HOXA4-204ENST00000610970 PTPN23Q9H3S7 1636 aa34.66■■■■□ 3.14
HOXA4-204ENST00000610970 TCOF1Q13428 1488 aaKnown RBP34.65■■■■□ 3.14
HOXA4-204ENST00000610970 HFM1A2PYH4 1435 aa34.64■■■■□ 3.14
HOXA4-204ENST00000610970 TIMELESSQ9UNS1 1208 aa34.64■■■■□ 3.14
HOXA4-204ENST00000610970 MIA2Q96PC5 1412 aa34.59■■■■□ 3.13
HOXA4-204ENST00000610970 CENPBP07199 599 aaPredicted RBP34.55■■■■□ 3.12
HOXA4-204ENST00000610970 RAPGEF6Q8TEU7 1601 aa34.54■■■■□ 3.12
HOXA4-204ENST00000610970 PTPRKQ15262 1439 aa34.53■■■■□ 3.12
HOXA4-204ENST00000610970 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
HOXA4-204ENST00000610970 CDK13Q14004 1512 aaKnown RBP34.53■■■■□ 3.12
HOXA4-204ENST00000610970 CEP170Q5SW79 1584 aa34.52■■■■□ 3.12
HOXA4-204ENST00000610970 NUP160Q12769 1436 aa34.5■■■■□ 3.11
HOXA4-204ENST00000610970 UACAQ9BZF9 1416 aa34.49■■■■□ 3.11
HOXA4-204ENST00000610970 AKNAQ7Z591 1439 aa34.48■■■■□ 3.11
HOXA4-204ENST00000610970 NAIPQ13075 1403 aa34.48■■■■□ 3.11
HOXA4-204ENST00000610970 FBLN2P98095 1184 aa34.47■■■■□ 3.11
HOXA4-204ENST00000610970 ACIN1Q9UKV3 1341 aaKnown RBP34.47■■■■□ 3.11
HOXA4-204ENST00000610970 NUP153P49790 1475 aaKnown RBP34.45■■■■□ 3.11
HOXA4-204ENST00000610970 CARMIL2Q6F5E8 1435 aa34.43■■■■□ 3.1
HOXA4-204ENST00000610970 CDK11AQ9UQ88 783 aaPredicted RBP34.43■■■■□ 3.1
HOXA4-204ENST00000610970 MIER1Q8N108 512 aa34.41■■■■□ 3.1
HOXA4-204ENST00000610970 GCC2Q8IWJ2 1684 aa34.4■■■■□ 3.1
HOXA4-204ENST00000610970 OSCARQ8IYS5 282 aa34.4■■■■□ 3.1
HOXA4-204ENST00000610970 CHD1O14646 1710 aa34.37■■■■□ 3.09
HOXA4-204ENST00000610970 SIN3AQ96ST3 1273 aa34.31■■■■□ 3.08
HOXA4-204ENST00000610970 SCAF1Q9H7N4 1312 aaKnown RBP34.3■■■■□ 3.08
HOXA4-204ENST00000610970 JPH4Q96JJ6 628 aa34.3■■■■□ 3.08
HOXA4-204ENST00000610970 NEUROD1Q13562 356 aa34.28■■■■□ 3.08
HOXA4-204ENST00000610970 TROQ12816 1431 aaPredicted RBP34.27■■■■□ 3.08
HOXA4-204ENST00000610970 ADCY10Q96PN6 1610 aa34.24■■■■□ 3.07
HOXA4-204ENST00000610970 ROCK1Q13464 1354 aa34.23■■■■□ 3.07
HOXA4-204ENST00000610970 DNMT1P26358 1616 aaKnown RBP34.21■■■■□ 3.07
HOXA4-204ENST00000610970 PPP1R15AO75807 674 aaPredicted RBP34.21■■■■□ 3.07
HOXA4-204ENST00000610970 ITSN2Q9NZM3 1697 aa34.2■■■■□ 3.07
HOXA4-204ENST00000610970 PLB1Q6P1J6 1458 aa34.19■■■■□ 3.06
HOXA4-204ENST00000610970 DAPK1P53355 1430 aa34.17■■■■□ 3.06
HOXA4-204ENST00000610970 ARID3CA6NKF2 412 aa34.17■■■■□ 3.06
HOXA4-204ENST00000610970 ABCA8O94911 1581 aa34.16■■■■□ 3.06
HOXA4-204ENST00000610970 TONSLQ96HA7 1378 aa34.15■■■■□ 3.06
HOXA4-204ENST00000610970 RRP7BPQ9NSQ0 103 aa34.13■■■■□ 3.05
HOXA4-204ENST00000610970 PRG4Q92954 1404 aaPredicted RBP34.1■■■■□ 3.05
HOXA4-204ENST00000610970 CHIC2Q9UKJ5 165 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms