RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
CD9-212ENST00000610354 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
CD9-212ENST00000610354 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
CD9-212ENST00000610354 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
CD9-212ENST00000610354 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
CD9-212ENST00000610354 JPH4Q96JJ6 628 aa21.62■■□□□ 1.05
CD9-212ENST00000610354 KIAA0586Q9BVV6 1533 aa21.61■■□□□ 1.05
CD9-212ENST00000610354 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
CD9-212ENST00000610354 PRG4Q92954 1404 aaPredicted RBP21.58■■□□□ 1.05
CD9-212ENST00000610354 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
CD9-212ENST00000610354 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
CD9-212ENST00000610354 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
CD9-212ENST00000610354 EEA1Q15075 1411 aa21.42■■□□□ 1.02
CD9-212ENST00000610354 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
CD9-212ENST00000610354 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
CD9-212ENST00000610354 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
CD9-212ENST00000610354 UGGT2Q9NYU1 1516 aa21.38■■□□□ 1.01
CD9-212ENST00000610354 CARMIL2Q6F5E8 1435 aa21.33■■□□□ 1
CD9-212ENST00000610354 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
CD9-212ENST00000610354 PTPRGP23470 1445 aa21.3■■□□□ 1
CD9-212ENST00000610354 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
CD9-212ENST00000610354 KIAA0556O60303 1618 aa21.29■■□□□ 1
CD9-212ENST00000610354 TRHP20396 242 aaPredicted RBP21.27■□□□□ 0.99
CD9-212ENST00000610354 KIF21BO75037 1637 aa21.26■□□□□ 0.99
CD9-212ENST00000610354 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
CD9-212ENST00000610354 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
CD9-212ENST00000610354 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
CD9-212ENST00000610354 UHRF1BP1LA0JNW5 1464 aa21.15■□□□□ 0.98
CD9-212ENST00000610354 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
CD9-212ENST00000610354 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
CD9-212ENST00000610354 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
CD9-212ENST00000610354 MAPKBP1O60336 1514 aa21.13■□□□□ 0.97
CD9-212ENST00000610354 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
CD9-212ENST00000610354 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
CD9-212ENST00000610354 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
CD9-212ENST00000610354 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
CD9-212ENST00000610354 PLB1Q6P1J6 1458 aa21.1■□□□□ 0.97
CD9-212ENST00000610354 ABCA8O94911 1581 aa21.08■□□□□ 0.96
CD9-212ENST00000610354 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
CD9-212ENST00000610354 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
CD9-212ENST00000610354 ABCC10Q5T3U5 1492 aa21.05■□□□□ 0.96
CD9-212ENST00000610354 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
CD9-212ENST00000610354 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
CD9-212ENST00000610354 ZCCHC11Q5TAX3 1644 aaKnown RBP21.03■□□□□ 0.96
CD9-212ENST00000610354 FHOD3Q2V2M9 1422 aa21.01■□□□□ 0.95
CD9-212ENST00000610354 ASXL2Q76L83 1435 aa21.01■□□□□ 0.95
CD9-212ENST00000610354 FAM69CQ0P6D2 419 aa21■□□□□ 0.95
CD9-212ENST00000610354 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
CD9-212ENST00000610354 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
CD9-212ENST00000610354 ARHGAP35Q9NRY4 1499 aa20.92■□□□□ 0.94
CD9-212ENST00000610354 ATP10BO94823 1461 aa20.91■□□□□ 0.94
CD9-212ENST00000610354 EPRSP07814 1512 aaKnown RBP20.89■□□□□ 0.94
CD9-212ENST00000610354 GLI2P10070 1586 aa20.89■□□□□ 0.94
CD9-212ENST00000610354 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
CD9-212ENST00000610354 TSPOAP1O95153 1857 aa20.89■□□□□ 0.93
CD9-212ENST00000610354 NUP153P49790 1475 aaKnown RBP20.87■□□□□ 0.93
CD9-212ENST00000610354 WDR7Q9Y4E6 1490 aa20.87■□□□□ 0.93
CD9-212ENST00000610354 PPRC1Q5VV67 1664 aaKnown RBP20.84■□□□□ 0.93
CD9-212ENST00000610354 MAP3K4Q9Y6R4 1608 aa20.81■□□□□ 0.92
CD9-212ENST00000610354 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
CD9-212ENST00000610354 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
CD9-212ENST00000610354 CLIP1P30622 1438 aa20.73■□□□□ 0.91
CD9-212ENST00000610354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
CD9-212ENST00000610354 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
CD9-212ENST00000610354 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
CD9-212ENST00000610354 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
CD9-212ENST00000610354 CFAP43Q8NDM7 1665 aa20.71■□□□□ 0.91
CD9-212ENST00000610354 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
CD9-212ENST00000610354 HECW1Q76N89 1606 aa20.69■□□□□ 0.9
CD9-212ENST00000610354 CD109Q6YHK3 1445 aa20.69■□□□□ 0.9
CD9-212ENST00000610354 KDM6BO15054 1643 aa20.68■□□□□ 0.9
CD9-212ENST00000610354 MSH5O43196 834 aa20.68■□□□□ 0.9
CD9-212ENST00000610354 ABCA9Q8IUA7 1624 aa20.67■□□□□ 0.9
CD9-212ENST00000610354 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
CD9-212ENST00000610354 COL17A1Q9UMD9 1497 aaPredicted RBP20.66■□□□□ 0.9
CD9-212ENST00000610354 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
CD9-212ENST00000610354 PCF11O94913 1555 aaKnown RBP20.66■□□□□ 0.9
CD9-212ENST00000610354 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
CD9-212ENST00000610354 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
CD9-212ENST00000610354 TEX14Q8IWB6 1497 aa20.64■□□□□ 0.89
CD9-212ENST00000610354 CEP162Q5TB80 1403 aa20.63■□□□□ 0.89
CD9-212ENST00000610354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.89
CD9-212ENST00000610354 TTC37Q6PGP7 1564 aa20.57■□□□□ 0.88
CD9-212ENST00000610354 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
CD9-212ENST00000610354 KIF14Q15058 1648 aa20.52■□□□□ 0.88
CD9-212ENST00000610354 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
CD9-212ENST00000610354 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.87
CD9-212ENST00000610354 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
CD9-212ENST00000610354 ARAP3Q8WWN8 1544 aa20.49■□□□□ 0.87
CD9-212ENST00000610354 NEO1Q92859 1461 aa20.47■□□□□ 0.87
CD9-212ENST00000610354 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
CD9-212ENST00000610354 PLCH2O75038 1416 aa20.44■□□□□ 0.86
CD9-212ENST00000610354 FANCAO15360 1455 aa20.42■□□□□ 0.86
CD9-212ENST00000610354 MYO5CQ9NQX4 1742 aa20.42■□□□□ 0.86
CD9-212ENST00000610354 AKNAQ7Z591 1439 aa20.41■□□□□ 0.86
CD9-212ENST00000610354 FRMPD1Q5SYB0 1578 aa20.4■□□□□ 0.86
CD9-212ENST00000610354 RAPGEF3O95398 923 aa20.39■□□□□ 0.85
CD9-212ENST00000610354 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
CD9-212ENST00000610354 CFAP74Q9C0B2 1584 aa20.38■□□□□ 0.85
CD9-212ENST00000610354 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms