RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
LINC02538-201ENST00000609107 HIRIP3Q9BW71 556 aaPredicted RBP19.56■□□□□ 0.72
LINC02538-201ENST00000609107 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
LINC02538-201ENST00000609107 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
LINC02538-201ENST00000609107 SETD5Q9C0A6 1442 aa19.53■□□□□ 0.72
LINC02538-201ENST00000609107 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
LINC02538-201ENST00000609107 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
LINC02538-201ENST00000609107 RTL5Q5HYW3 569 aaPredicted RBP19.51■□□□□ 0.71
LINC02538-201ENST00000609107 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
LINC02538-201ENST00000609107 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
LINC02538-201ENST00000609107 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
LINC02538-201ENST00000609107 RAB3GAP2Q9H2M9 1393 aa19.43■□□□□ 0.7
LINC02538-201ENST00000609107 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
LINC02538-201ENST00000609107 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
LINC02538-201ENST00000609107 CFDP1Q9UEE9 299 aaPredicted RBP19.4■□□□□ 0.7
LINC02538-201ENST00000609107 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
LINC02538-201ENST00000609107 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
LINC02538-201ENST00000609107 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
LINC02538-201ENST00000609107 KIF21BO75037 1637 aa19.35■□□□□ 0.69
LINC02538-201ENST00000609107 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
LINC02538-201ENST00000609107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
LINC02538-201ENST00000609107 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
LINC02538-201ENST00000609107 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
LINC02538-201ENST00000609107 ANP32AP39687 249 aaKnown RBP19.32■□□□□ 0.68
LINC02538-201ENST00000609107 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
LINC02538-201ENST00000609107 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
LINC02538-201ENST00000609107 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
LINC02538-201ENST00000609107 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
LINC02538-201ENST00000609107 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
LINC02538-201ENST00000609107 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
LINC02538-201ENST00000609107 IGF1RP08069 1367 aa19.25■□□□□ 0.67
LINC02538-201ENST00000609107 SUPT16HQ9Y5B9 1047 aaKnown RBP19.25■□□□□ 0.67
LINC02538-201ENST00000609107 CCDC136Q96JN2 1154 aa19.24■□□□□ 0.67
LINC02538-201ENST00000609107 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
LINC02538-201ENST00000609107 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
LINC02538-201ENST00000609107 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
LINC02538-201ENST00000609107 IRX6P78412 446 aaPredicted RBP19.2■□□□□ 0.66
LINC02538-201ENST00000609107 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
LINC02538-201ENST00000609107 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
LINC02538-201ENST00000609107 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
LINC02538-201ENST00000609107 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
LINC02538-201ENST00000609107 BCL11AQ9H165 835 aa19.17■□□□□ 0.66
LINC02538-201ENST00000609107 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
LINC02538-201ENST00000609107 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
LINC02538-201ENST00000609107 CFTRP13569 1480 aa19.14■□□□□ 0.66
LINC02538-201ENST00000609107 NEFMP07197 916 aa19.14■□□□□ 0.65
LINC02538-201ENST00000609107 KCNH8Q96L42 1107 aa19.14■□□□□ 0.65
LINC02538-201ENST00000609107 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
LINC02538-201ENST00000609107 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
LINC02538-201ENST00000609107 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
LINC02538-201ENST00000609107 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
LINC02538-201ENST00000609107 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
LINC02538-201ENST00000609107 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
LINC02538-201ENST00000609107 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
LINC02538-201ENST00000609107 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
LINC02538-201ENST00000609107 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
LINC02538-201ENST00000609107 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
LINC02538-201ENST00000609107 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
LINC02538-201ENST00000609107 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
LINC02538-201ENST00000609107 PPP4R2Q9NY27 417 aa19.05■□□□□ 0.64
LINC02538-201ENST00000609107 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
LINC02538-201ENST00000609107 CDCA8Q53HL2 280 aa19.04■□□□□ 0.64
LINC02538-201ENST00000609107 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
LINC02538-201ENST00000609107 ZBTB47Q9UFB7 747 aaPredicted RBP19.03■□□□□ 0.64
LINC02538-201ENST00000609107 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
LINC02538-201ENST00000609107 PKD2Q13563 968 aa19.01■□□□□ 0.63
LINC02538-201ENST00000609107 FOXD1Q16676 465 aa19.01■□□□□ 0.63
LINC02538-201ENST00000609107 CUX1P39880 1505 aa19.01■□□□□ 0.63
LINC02538-201ENST00000609107 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
LINC02538-201ENST00000609107 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
LINC02538-201ENST00000609107 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
LINC02538-201ENST00000609107 PHLDB1Q86UU1 1377 aa18.99■□□□□ 0.63
LINC02538-201ENST00000609107 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
LINC02538-201ENST00000609107 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
LINC02538-201ENST00000609107 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
LINC02538-201ENST00000609107 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
LINC02538-201ENST00000609107 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
LINC02538-201ENST00000609107 KNSTRNQ9Y448 316 aa18.96■□□□□ 0.63
LINC02538-201ENST00000609107 ANP32EQ9BTT0 268 aa18.93■□□□□ 0.62
LINC02538-201ENST00000609107 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
LINC02538-201ENST00000609107 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
LINC02538-201ENST00000609107 NUP155O75694 1391 aa18.92■□□□□ 0.62
LINC02538-201ENST00000609107 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
LINC02538-201ENST00000609107 FYCO1Q9BQS8 1478 aa18.9■□□□□ 0.62
LINC02538-201ENST00000609107 TMF1P82094 1093 aa18.88■□□□□ 0.61
LINC02538-201ENST00000609107 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
LINC02538-201ENST00000609107 PRKCSHP14314 528 aaPredicted RBP18.87■□□□□ 0.61
LINC02538-201ENST00000609107 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
LINC02538-201ENST00000609107 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
LINC02538-201ENST00000609107 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
LINC02538-201ENST00000609107 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
LINC02538-201ENST00000609107 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
LINC02538-201ENST00000609107 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
LINC02538-201ENST00000609107 TIAM1Q13009 1591 aa18.83■□□□□ 0.6
LINC02538-201ENST00000609107 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
LINC02538-201ENST00000609107 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
LINC02538-201ENST00000609107 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
LINC02538-201ENST00000609107 CC2D1BQ5T0F9 858 aaKnown RBP18.81■□□□□ 0.6
LINC02538-201ENST00000609107 KANK1Q14678 1352 aa18.81■□□□□ 0.6
LINC02538-201ENST00000609107 NBR1Q14596 966 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms