RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 VPS8Q8N3P4 1428 aa9.4□□□□□ -0.9
HDDC2-205ENST00000608456 SOGA1O94964 1423 aa9.39□□□□□ -0.91
HDDC2-205ENST00000608456 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
HDDC2-205ENST00000608456 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
HDDC2-205ENST00000608456 CLIP1P30622 1438 aa9.35□□□□□ -0.91
HDDC2-205ENST00000608456 MIER1Q8N108 512 aa9.35□□□□□ -0.91
HDDC2-205ENST00000608456 DSG3P32926 999 aa9.33□□□□□ -0.92
HDDC2-205ENST00000608456 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
HDDC2-205ENST00000608456 PROM2Q8N271 834 aa9.32□□□□□ -0.92
HDDC2-205ENST00000608456 CUX2O14529 1486 aa9.32□□□□□ -0.92
HDDC2-205ENST00000608456 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
HDDC2-205ENST00000608456 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
HDDC2-205ENST00000608456 ERICH3Q5RHP9 1530 aa9.31□□□□□ -0.92
HDDC2-205ENST00000608456 ABCB7O75027 752 aa9.29□□□□□ -0.92
HDDC2-205ENST00000608456 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
HDDC2-205ENST00000608456 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
HDDC2-205ENST00000608456 DHX57Q6P158 1386 aaKnown RBP9.26□□□□□ -0.93
HDDC2-205ENST00000608456 RRBP1Q9P2E9 1410 aaKnown RBP9.26□□□□□ -0.93
HDDC2-205ENST00000608456 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
HDDC2-205ENST00000608456 MAP3K1Q13233 1512 aa9.24□□□□□ -0.93
HDDC2-205ENST00000608456 PRXQ9BXM0 1461 aa9.23□□□□□ -0.93
HDDC2-205ENST00000608456 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
HDDC2-205ENST00000608456 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
HDDC2-205ENST00000608456 TOP2BQ02880 1626 aa9.22□□□□□ -0.93
HDDC2-205ENST00000608456 SYNJ1O43426 1573 aa9.21□□□□□ -0.93
HDDC2-205ENST00000608456 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
HDDC2-205ENST00000608456 ANP32EQ9BTT0 268 aa9.19□□□□□ -0.94
HDDC2-205ENST00000608456 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
HDDC2-205ENST00000608456 RAPGEF2Q9Y4G8 1499 aa9.19□□□□□ -0.94
HDDC2-205ENST00000608456 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
HDDC2-205ENST00000608456 UNC13AQ9UPW8 1703 aa9.19□□□□□ -0.94
HDDC2-205ENST00000608456 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
HDDC2-205ENST00000608456 CCER2I3L3R5 266 aa9.16□□□□□ -0.94
HDDC2-205ENST00000608456 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
HDDC2-205ENST00000608456 SPDYE2Q495Y8 402 aa9.16□□□□□ -0.94
HDDC2-205ENST00000608456 CCNB3Q8WWL7 1395 aa9.15□□□□□ -0.94
HDDC2-205ENST00000608456 BICRAQ9NZM4 1560 aa9.15□□□□□ -0.95
HDDC2-205ENST00000608456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDDC2-205ENST00000608456 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
HDDC2-205ENST00000608456 ARAP1Q96P48 1450 aa9.13□□□□□ -0.95
HDDC2-205ENST00000608456 KIF27Q86VH2 1401 aa9.13□□□□□ -0.95
HDDC2-205ENST00000608456 ERICH6BQ5W0A0 696 aa9.12□□□□□ -0.95
HDDC2-205ENST00000608456 SSUH2Q9Y2M2 353 aa9.12□□□□□ -0.95
HDDC2-205ENST00000608456 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
HDDC2-205ENST00000608456 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
HDDC2-205ENST00000608456 SETD5Q9C0A6 1442 aa9.08□□□□□ -0.96
HDDC2-205ENST00000608456 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
HDDC2-205ENST00000608456 HMGXB3Q12766 1538 aa9.07□□□□□ -0.96
HDDC2-205ENST00000608456 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
HDDC2-205ENST00000608456 NEFLP07196 543 aa9.06□□□□□ -0.96
HDDC2-205ENST00000608456 FHAD1B1AJZ9 1412 aa9.05□□□□□ -0.96
HDDC2-205ENST00000608456 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
HDDC2-205ENST00000608456 KANK4Q5T7N3 995 aaPredicted RBP9.04□□□□□ -0.96
HDDC2-205ENST00000608456 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
HDDC2-205ENST00000608456 RAB3GAP2Q9H2M9 1393 aa9.03□□□□□ -0.96
HDDC2-205ENST00000608456 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
HDDC2-205ENST00000608456 MAPKBP1O60336 1514 aa9.02□□□□□ -0.97
HDDC2-205ENST00000608456 CFTRP13569 1480 aa9.02□□□□□ -0.97
HDDC2-205ENST00000608456 TIAM1Q13009 1591 aa9.01□□□□□ -0.97
HDDC2-205ENST00000608456 STAG3Q9UJ98 1225 aa9.01□□□□□ -0.97
HDDC2-205ENST00000608456 FANCIQ9NVI1 1328 aa9.01□□□□□ -0.97
HDDC2-205ENST00000608456 ANP32CO43423 234 aa9□□□□□ -0.97
HDDC2-205ENST00000608456 AQRO60306 1485 aaKnown RBP eCLIP9□□□□□ -0.97
HDDC2-205ENST00000608456 LRRC9Q6ZRR7 1453 aa9□□□□□ -0.97
HDDC2-205ENST00000608456 CUX1P39880 1505 aa8.98□□□□□ -0.97
HDDC2-205ENST00000608456 IGF1RP08069 1367 aa8.98□□□□□ -0.97
HDDC2-205ENST00000608456 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDDC2-205ENST00000608456 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
HDDC2-205ENST00000608456 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.98
HDDC2-205ENST00000608456 EFCAB5A4FU69 1503 aa8.94□□□□□ -0.98
HDDC2-205ENST00000608456 DDX10Q13206 875 aaKnown RBP8.93□□□□□ -0.98
HDDC2-205ENST00000608456 CARMIL1Q5VZK9 1371 aa8.93□□□□□ -0.98
HDDC2-205ENST00000608456 CFAP43Q8NDM7 1665 aa8.93□□□□□ -0.98
HDDC2-205ENST00000608456 PRDM2Q13029 1718 aa8.92□□□□□ -0.98
HDDC2-205ENST00000608456 WDR97A6NE52 1622 aa8.92□□□□□ -0.98
HDDC2-205ENST00000608456 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
HDDC2-205ENST00000608456 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
HDDC2-205ENST00000608456 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
HDDC2-205ENST00000608456 CASKIN1Q8WXD9 1431 aa8.91□□□□□ -0.98
HDDC2-205ENST00000608456 UACAQ9BZF9 1416 aa8.91□□□□□ -0.98
HDDC2-205ENST00000608456 CDK11AQ9UQ88 783 aaPredicted RBP8.91□□□□□ -0.98
HDDC2-205ENST00000608456 FGD5Q6ZNL6 1462 aa8.9□□□□□ -0.98
HDDC2-205ENST00000608456 PHLDB1Q86UU1 1377 aa8.89□□□□□ -0.99
HDDC2-205ENST00000608456 HFM1A2PYH4 1435 aa8.88□□□□□ -0.99
HDDC2-205ENST00000608456 FMN1Q68DA7 1419 aa8.88□□□□□ -0.99
HDDC2-205ENST00000608456 TONSLQ96HA7 1378 aa8.88□□□□□ -0.99
HDDC2-205ENST00000608456 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
HDDC2-205ENST00000608456 PPP4R2Q9NY27 417 aa8.87□□□□□ -0.99
HDDC2-205ENST00000608456 CCDC18Q5T9S5 1454 aa8.87□□□□□ -0.99
HDDC2-205ENST00000608456 AKNAQ7Z591 1439 aa8.87□□□□□ -0.99
HDDC2-205ENST00000608456 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
HDDC2-205ENST00000608456 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
HDDC2-205ENST00000608456 THOC2Q8NI27 1593 aaKnown RBP8.85□□□□□ -0.99
HDDC2-205ENST00000608456 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
HDDC2-205ENST00000608456 FGD6Q6ZV73 1430 aa8.84□□□□□ -0.99
HDDC2-205ENST00000608456 SIN3AQ96ST3 1273 aa8.84□□□□□ -0.99
HDDC2-205ENST00000608456 CC2D2AQ9P2K1 1620 aa8.83□□□□□ -1
HDDC2-205ENST00000608456 FAM50AQ14320 339 aaKnown RBP8.83□□□□□ -1
HDDC2-205ENST00000608456 NCOA2Q15596 1464 aa8.82□□□□□ -1
HDDC2-205ENST00000608456 CUL7Q14999 1698 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms