RNA–Protein interactions for RNA: ENST00000607941.5

SYT6-202, Transcript of synaptotagmin 6, humanhuman

TSL 2 BASIC

Gene SYT6, Length 4,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-202ENST00000607941 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
SYT6-202ENST00000607941 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
SYT6-202ENST00000607941 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
SYT6-202ENST00000607941 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
SYT6-202ENST00000607941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYT6-202ENST00000607941 FOXD1Q16676 465 aa13.45□□□□□ -0.26
SYT6-202ENST00000607941 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYT6-202ENST00000607941 NBR1Q14596 966 aa13.44□□□□□ -0.26
SYT6-202ENST00000607941 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
SYT6-202ENST00000607941 CUX2O14529 1486 aa13.41□□□□□ -0.26
SYT6-202ENST00000607941 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
SYT6-202ENST00000607941 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
SYT6-202ENST00000607941 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
SYT6-202ENST00000607941 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
SYT6-202ENST00000607941 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
SYT6-202ENST00000607941 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
SYT6-202ENST00000607941 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
SYT6-202ENST00000607941 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
SYT6-202ENST00000607941 ANP32AP39687 249 aaKnown RBP13.34□□□□□ -0.27
SYT6-202ENST00000607941 CHMP7Q8WUX9 453 aaPredicted RBP13.32□□□□□ -0.28
SYT6-202ENST00000607941 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
SYT6-202ENST00000607941 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
SYT6-202ENST00000607941 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
SYT6-202ENST00000607941 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
SYT6-202ENST00000607941 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
SYT6-202ENST00000607941 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
SYT6-202ENST00000607941 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
SYT6-202ENST00000607941 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
SYT6-202ENST00000607941 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
SYT6-202ENST00000607941 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
SYT6-202ENST00000607941 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.28
SYT6-202ENST00000607941 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
SYT6-202ENST00000607941 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
SYT6-202ENST00000607941 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
SYT6-202ENST00000607941 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
SYT6-202ENST00000607941 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
SYT6-202ENST00000607941 CARD11Q9BXL7 1154 aa13.23□□□□□ -0.29
SYT6-202ENST00000607941 ZBTB47Q9UFB7 747 aaPredicted RBP13.21□□□□□ -0.3
SYT6-202ENST00000607941 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
SYT6-202ENST00000607941 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
SYT6-202ENST00000607941 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
SYT6-202ENST00000607941 EIF4G1Q04637 1599 aaKnown RBP13.18□□□□□ -0.3
SYT6-202ENST00000607941 ARXQ96QS3 562 aa13.17□□□□□ -0.3
SYT6-202ENST00000607941 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
SYT6-202ENST00000607941 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
SYT6-202ENST00000607941 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
SYT6-202ENST00000607941 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
SYT6-202ENST00000607941 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
SYT6-202ENST00000607941 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
SYT6-202ENST00000607941 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYT6-202ENST00000607941 PKD2Q13563 968 aa13.13□□□□□ -0.31
SYT6-202ENST00000607941 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
SYT6-202ENST00000607941 KIF21BO75037 1637 aa13.12□□□□□ -0.31
SYT6-202ENST00000607941 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
SYT6-202ENST00000607941 LAS1LQ9Y4W2 734 aaKnown RBP13.11□□□□□ -0.31
SYT6-202ENST00000607941 IGF1RP08069 1367 aa13.1□□□□□ -0.31
SYT6-202ENST00000607941 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
SYT6-202ENST00000607941 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
SYT6-202ENST00000607941 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
SYT6-202ENST00000607941 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
SYT6-202ENST00000607941 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.31
SYT6-202ENST00000607941 PLPPR3Q6T4P5 718 aa13.08□□□□□ -0.32
SYT6-202ENST00000607941 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
SYT6-202ENST00000607941 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
SYT6-202ENST00000607941 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
SYT6-202ENST00000607941 RGS3P49796 1198 aa13.05□□□□□ -0.32
SYT6-202ENST00000607941 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
SYT6-202ENST00000607941 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.33
SYT6-202ENST00000607941 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SYT6-202ENST00000607941 FMN1Q68DA7 1419 aa13□□□□□ -0.33
SYT6-202ENST00000607941 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
SYT6-202ENST00000607941 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
SYT6-202ENST00000607941 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
SYT6-202ENST00000607941 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
SYT6-202ENST00000607941 NUP155O75694 1391 aa12.98□□□□□ -0.33
SYT6-202ENST00000607941 CCDC184Q52MB2 194 aa12.97□□□□□ -0.33
SYT6-202ENST00000607941 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
SYT6-202ENST00000607941 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
SYT6-202ENST00000607941 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.96□□□□□ -0.33
SYT6-202ENST00000607941 NEFMP07197 916 aa12.96□□□□□ -0.34
SYT6-202ENST00000607941 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
SYT6-202ENST00000607941 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
SYT6-202ENST00000607941 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
SYT6-202ENST00000607941 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
SYT6-202ENST00000607941 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
SYT6-202ENST00000607941 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYT6-202ENST00000607941 PLIN1O60240 522 aa12.92□□□□□ -0.34
SYT6-202ENST00000607941 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
SYT6-202ENST00000607941 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
SYT6-202ENST00000607941 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
SYT6-202ENST00000607941 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
SYT6-202ENST00000607941 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
SYT6-202ENST00000607941 UPF2Q9HAU5 1272 aaKnown RBP12.9□□□□□ -0.34
SYT6-202ENST00000607941 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
SYT6-202ENST00000607941 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
SYT6-202ENST00000607941 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
SYT6-202ENST00000607941 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
SYT6-202ENST00000607941 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
SYT6-202ENST00000607941 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
SYT6-202ENST00000607941 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms