RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
RFTN1-212ENST00000607320 NUP160Q12769 1436 aa18.74■□□□□ 0.59
RFTN1-212ENST00000607320 CEP170Q5SW79 1584 aa18.73■□□□□ 0.59
RFTN1-212ENST00000607320 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
RFTN1-212ENST00000607320 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
RFTN1-212ENST00000607320 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
RFTN1-212ENST00000607320 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
RFTN1-212ENST00000607320 CUL7Q14999 1698 aa18.57■□□□□ 0.56
RFTN1-212ENST00000607320 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
RFTN1-212ENST00000607320 JPH4Q96JJ6 628 aa18.55■□□□□ 0.56
RFTN1-212ENST00000607320 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
RFTN1-212ENST00000607320 IGF1RP08069 1367 aa18.53■□□□□ 0.56
RFTN1-212ENST00000607320 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
RFTN1-212ENST00000607320 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
RFTN1-212ENST00000607320 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
RFTN1-212ENST00000607320 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
RFTN1-212ENST00000607320 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
RFTN1-212ENST00000607320 IQGAP2Q13576 1575 aa18.33■□□□□ 0.52
RFTN1-212ENST00000607320 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
RFTN1-212ENST00000607320 MAPKBP1O60336 1514 aa18.31■□□□□ 0.52
RFTN1-212ENST00000607320 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
RFTN1-212ENST00000607320 PTPRGP23470 1445 aa18.28■□□□□ 0.52
RFTN1-212ENST00000607320 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
RFTN1-212ENST00000607320 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
RFTN1-212ENST00000607320 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
RFTN1-212ENST00000607320 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
RFTN1-212ENST00000607320 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
RFTN1-212ENST00000607320 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
RFTN1-212ENST00000607320 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
RFTN1-212ENST00000607320 UGGT2Q9NYU1 1516 aa18.2■□□□□ 0.5
RFTN1-212ENST00000607320 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
RFTN1-212ENST00000607320 CTTNBP2Q8WZ74 1663 aa18.18■□□□□ 0.5
RFTN1-212ENST00000607320 ABCC2Q92887 1545 aa18.18■□□□□ 0.5
RFTN1-212ENST00000607320 UHRF1BP1LA0JNW5 1464 aa18.16■□□□□ 0.5
RFTN1-212ENST00000607320 TSPOAP1O95153 1857 aa18.15■□□□□ 0.5
RFTN1-212ENST00000607320 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
RFTN1-212ENST00000607320 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
RFTN1-212ENST00000607320 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
RFTN1-212ENST00000607320 PLB1Q6P1J6 1458 aa18.11■□□□□ 0.49
RFTN1-212ENST00000607320 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
RFTN1-212ENST00000607320 ASXL2Q76L83 1435 aa18.1■□□□□ 0.49
RFTN1-212ENST00000607320 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
RFTN1-212ENST00000607320 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
RFTN1-212ENST00000607320 KDM6BO15054 1643 aa18.08■□□□□ 0.48
RFTN1-212ENST00000607320 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
RFTN1-212ENST00000607320 GLI2P10070 1586 aa18.06■□□□□ 0.48
RFTN1-212ENST00000607320 ZCCHC11Q5TAX3 1644 aaKnown RBP18.05■□□□□ 0.48
RFTN1-212ENST00000607320 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
RFTN1-212ENST00000607320 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
RFTN1-212ENST00000607320 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
RFTN1-212ENST00000607320 EEA1Q15075 1411 aa17.98■□□□□ 0.47
RFTN1-212ENST00000607320 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
RFTN1-212ENST00000607320 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
RFTN1-212ENST00000607320 ABCA8O94911 1581 aa17.96■□□□□ 0.47
RFTN1-212ENST00000607320 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
RFTN1-212ENST00000607320 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
RFTN1-212ENST00000607320 SAMD9Q5K651 1589 aa17.89■□□□□ 0.45
RFTN1-212ENST00000607320 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
RFTN1-212ENST00000607320 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
RFTN1-212ENST00000607320 KCNH8Q96L42 1107 aa17.83■□□□□ 0.44
RFTN1-212ENST00000607320 CD109Q6YHK3 1445 aa17.82■□□□□ 0.44
RFTN1-212ENST00000607320 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
RFTN1-212ENST00000607320 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
RFTN1-212ENST00000607320 KIF21BO75037 1637 aa17.81■□□□□ 0.44
RFTN1-212ENST00000607320 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
RFTN1-212ENST00000607320 ATP10BO94823 1461 aa17.8■□□□□ 0.44
RFTN1-212ENST00000607320 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
RFTN1-212ENST00000607320 ARID3CA6NKF2 412 aa17.77■□□□□ 0.44
RFTN1-212ENST00000607320 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
RFTN1-212ENST00000607320 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
RFTN1-212ENST00000607320 EFCAB5A4FU69 1503 aa17.75■□□□□ 0.43
RFTN1-212ENST00000607320 FHOD3Q2V2M9 1422 aa17.74■□□□□ 0.43
RFTN1-212ENST00000607320 ABCA9Q8IUA7 1624 aa17.73■□□□□ 0.43
RFTN1-212ENST00000607320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
RFTN1-212ENST00000607320 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
RFTN1-212ENST00000607320 NUP153P49790 1475 aaKnown RBP17.71■□□□□ 0.43
RFTN1-212ENST00000607320 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
RFTN1-212ENST00000607320 ARAP3Q8WWN8 1544 aa17.67■□□□□ 0.42
RFTN1-212ENST00000607320 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
RFTN1-212ENST00000607320 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
RFTN1-212ENST00000607320 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
RFTN1-212ENST00000607320 NEO1Q92859 1461 aa17.63■□□□□ 0.41
RFTN1-212ENST00000607320 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
RFTN1-212ENST00000607320 CFAP74Q9C0B2 1584 aa17.57■□□□□ 0.4
RFTN1-212ENST00000607320 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
RFTN1-212ENST00000607320 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
RFTN1-212ENST00000607320 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
RFTN1-212ENST00000607320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.55■□□□□ 0.4
RFTN1-212ENST00000607320 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
RFTN1-212ENST00000607320 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
RFTN1-212ENST00000607320 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
RFTN1-212ENST00000607320 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.39
RFTN1-212ENST00000607320 FANCAO15360 1455 aa17.51■□□□□ 0.39
RFTN1-212ENST00000607320 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
RFTN1-212ENST00000607320 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
RFTN1-212ENST00000607320 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
RFTN1-212ENST00000607320 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-212ENST00000607320 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-212ENST00000607320 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
RFTN1-212ENST00000607320 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms