RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
TMEM259-212ENST00000607316 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
TMEM259-212ENST00000607316 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
TMEM259-212ENST00000607316 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
TMEM259-212ENST00000607316 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
TMEM259-212ENST00000607316 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
TMEM259-212ENST00000607316 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
TMEM259-212ENST00000607316 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
TMEM259-212ENST00000607316 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
TMEM259-212ENST00000607316 EEA1Q15075 1411 aa22.86■■□□□ 1.25
TMEM259-212ENST00000607316 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
TMEM259-212ENST00000607316 DISP1Q96F81 1524 aa22.8■■□□□ 1.24
TMEM259-212ENST00000607316 UGGT2Q9NYU1 1516 aa22.79■■□□□ 1.24
TMEM259-212ENST00000607316 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
TMEM259-212ENST00000607316 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
TMEM259-212ENST00000607316 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
TMEM259-212ENST00000607316 ADCY10Q96PN6 1610 aa22.72■■□□□ 1.23
TMEM259-212ENST00000607316 KIF21BO75037 1637 aa22.71■■□□□ 1.23
TMEM259-212ENST00000607316 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
TMEM259-212ENST00000607316 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
TMEM259-212ENST00000607316 PTPRGP23470 1445 aa22.7■■□□□ 1.22
TMEM259-212ENST00000607316 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
TMEM259-212ENST00000607316 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
TMEM259-212ENST00000607316 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
TMEM259-212ENST00000607316 P3H3Q8IVL6 736 aa22.57■■□□□ 1.2
TMEM259-212ENST00000607316 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
TMEM259-212ENST00000607316 UACAQ9BZF9 1416 aa22.57■■□□□ 1.2
TMEM259-212ENST00000607316 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
TMEM259-212ENST00000607316 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
TMEM259-212ENST00000607316 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
TMEM259-212ENST00000607316 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
TMEM259-212ENST00000607316 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
TMEM259-212ENST00000607316 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
TMEM259-212ENST00000607316 KIF13AQ9H1H9 1805 aa22.49■■□□□ 1.19
TMEM259-212ENST00000607316 ABCA8O94911 1581 aa22.48■■□□□ 1.19
TMEM259-212ENST00000607316 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
TMEM259-212ENST00000607316 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
TMEM259-212ENST00000607316 DIP2BQ9P265 1576 aa22.44■■□□□ 1.18
TMEM259-212ENST00000607316 KDM5BQ9UGL1 1544 aa22.44■■□□□ 1.18
TMEM259-212ENST00000607316 ABCC10Q5T3U5 1492 aa22.43■■□□□ 1.18
TMEM259-212ENST00000607316 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
TMEM259-212ENST00000607316 ASXL2Q76L83 1435 aa22.4■■□□□ 1.18
TMEM259-212ENST00000607316 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
TMEM259-212ENST00000607316 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
TMEM259-212ENST00000607316 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
TMEM259-212ENST00000607316 ARHGAP35Q9NRY4 1499 aa22.35■■□□□ 1.17
TMEM259-212ENST00000607316 NUP153P49790 1475 aaKnown RBP22.29■■□□□ 1.16
TMEM259-212ENST00000607316 ATP10BO94823 1461 aa22.28■■□□□ 1.16
TMEM259-212ENST00000607316 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
TMEM259-212ENST00000607316 EPRSP07814 1512 aaKnown RBP22.27■■□□□ 1.16
TMEM259-212ENST00000607316 TSPOAP1O95153 1857 aa22.27■■□□□ 1.16
TMEM259-212ENST00000607316 GLI2P10070 1586 aa22.25■■□□□ 1.15
TMEM259-212ENST00000607316 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
TMEM259-212ENST00000607316 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
TMEM259-212ENST00000607316 MAP3K4Q9Y6R4 1608 aa22.19■■□□□ 1.14
TMEM259-212ENST00000607316 CLIP1P30622 1438 aa22.17■■□□□ 1.14
TMEM259-212ENST00000607316 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
TMEM259-212ENST00000607316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
TMEM259-212ENST00000607316 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
TMEM259-212ENST00000607316 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
TMEM259-212ENST00000607316 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
TMEM259-212ENST00000607316 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
TMEM259-212ENST00000607316 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
TMEM259-212ENST00000607316 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
TMEM259-212ENST00000607316 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
TMEM259-212ENST00000607316 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
TMEM259-212ENST00000607316 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
TMEM259-212ENST00000607316 KDM6BO15054 1643 aa22.07■■□□□ 1.12
TMEM259-212ENST00000607316 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
TMEM259-212ENST00000607316 ABCA9Q8IUA7 1624 aa22.05■■□□□ 1.12
TMEM259-212ENST00000607316 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
TMEM259-212ENST00000607316 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
TMEM259-212ENST00000607316 TEX14Q8IWB6 1497 aa22.01■■□□□ 1.11
TMEM259-212ENST00000607316 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
TMEM259-212ENST00000607316 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
TMEM259-212ENST00000607316 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
TMEM259-212ENST00000607316 FYCO1Q9BQS8 1478 aa21.98■■□□□ 1.11
TMEM259-212ENST00000607316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.98■■□□□ 1.11
TMEM259-212ENST00000607316 KIF14Q15058 1648 aa21.95■■□□□ 1.1
TMEM259-212ENST00000607316 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
TMEM259-212ENST00000607316 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
TMEM259-212ENST00000607316 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
TMEM259-212ENST00000607316 NEO1Q92859 1461 aa21.83■■□□□ 1.08
TMEM259-212ENST00000607316 ARAP3Q8WWN8 1544 aa21.81■■□□□ 1.08
TMEM259-212ENST00000607316 FANCAO15360 1455 aa21.81■■□□□ 1.08
TMEM259-212ENST00000607316 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
TMEM259-212ENST00000607316 PLCH2O75038 1416 aa21.8■■□□□ 1.08
TMEM259-212ENST00000607316 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
TMEM259-212ENST00000607316 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
TMEM259-212ENST00000607316 AKNAQ7Z591 1439 aa21.77■■□□□ 1.08
TMEM259-212ENST00000607316 RAPGEF3O95398 923 aa21.76■■□□□ 1.07
TMEM259-212ENST00000607316 CFAP74Q9C0B2 1584 aa21.76■■□□□ 1.07
TMEM259-212ENST00000607316 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
TMEM259-212ENST00000607316 CDC42BPBQ9Y5S2 1711 aa21.73■■□□□ 1.07
TMEM259-212ENST00000607316 ARHGAP5Q13017 1502 aa21.73■■□□□ 1.07
TMEM259-212ENST00000607316 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
TMEM259-212ENST00000607316 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
TMEM259-212ENST00000607316 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
TMEM259-212ENST00000607316 ADGRL1O94910 1474 aa21.71■■□□□ 1.07
TMEM259-212ENST00000607316 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms