RNA–Protein interactions for RNA: ENST00000606170.1

PRDM16-209, Transcript of PR/SET domain 16, humanhuman

TSL 4

Gene PRDM16, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-209ENST00000606170 PRG4Q92954 1404 aaPredicted RBP28.76■■■□□ 2.19
PRDM16-209ENST00000606170 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
PRDM16-209ENST00000606170 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
PRDM16-209ENST00000606170 KIAA0586Q9BVV6 1533 aa28.67■■■□□ 2.18
PRDM16-209ENST00000606170 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
PRDM16-209ENST00000606170 IQGAP2Q13576 1575 aa28.45■■■□□ 2.14
PRDM16-209ENST00000606170 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
PRDM16-209ENST00000606170 CARMIL2Q6F5E8 1435 aa28.41■■■□□ 2.14
PRDM16-209ENST00000606170 NPM1P06748 294 aaKnown RBP eCLIP28.39■■■□□ 2.14
PRDM16-209ENST00000606170 PTPRGP23470 1445 aa28.37■■■□□ 2.13
PRDM16-209ENST00000606170 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
PRDM16-209ENST00000606170 ADCY10Q96PN6 1610 aa28.32■■■□□ 2.12
PRDM16-209ENST00000606170 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
PRDM16-209ENST00000606170 DISP1Q96F81 1524 aa28.28■■■□□ 2.12
PRDM16-209ENST00000606170 UGGT2Q9NYU1 1516 aa28.27■■■□□ 2.12
PRDM16-209ENST00000606170 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
PRDM16-209ENST00000606170 CTTNBP2Q8WZ74 1663 aa28.23■■■□□ 2.11
PRDM16-209ENST00000606170 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
PRDM16-209ENST00000606170 FAM69CQ0P6D2 419 aa28.19■■■□□ 2.1
PRDM16-209ENST00000606170 KIAA0556O60303 1618 aa28.18■■■□□ 2.1
PRDM16-209ENST00000606170 KIF13AQ9H1H9 1805 aa28.16■■■□□ 2.1
PRDM16-209ENST00000606170 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
PRDM16-209ENST00000606170 ABCC10Q5T3U5 1492 aa28.15■■■□□ 2.1
PRDM16-209ENST00000606170 EEA1Q15075 1411 aa28.15■■■□□ 2.1
PRDM16-209ENST00000606170 UACAQ9BZF9 1416 aa28.15■■■□□ 2.1
PRDM16-209ENST00000606170 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
PRDM16-209ENST00000606170 UHRF1BP1LA0JNW5 1464 aa28.1■■■□□ 2.09
PRDM16-209ENST00000606170 GOLGA3Q08378 1498 aa28.1■■■□□ 2.09
PRDM16-209ENST00000606170 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
PRDM16-209ENST00000606170 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
PRDM16-209ENST00000606170 ASXL2Q76L83 1435 aa28.01■■■□□ 2.08
PRDM16-209ENST00000606170 P3H3Q8IVL6 736 aa28■■■□□ 2.07
PRDM16-209ENST00000606170 PLB1Q6P1J6 1458 aa27.99■■■□□ 2.07
PRDM16-209ENST00000606170 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
PRDM16-209ENST00000606170 RANGAP1P46060 587 aaPredicted RBP27.94■■■□□ 2.06
PRDM16-209ENST00000606170 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
PRDM16-209ENST00000606170 TSPOAP1O95153 1857 aa27.89■■■□□ 2.06
PRDM16-209ENST00000606170 EHMT2Q96KQ7 1210 aa27.89■■■□□ 2.06
PRDM16-209ENST00000606170 ABCA8O94911 1581 aa27.89■■■□□ 2.05
PRDM16-209ENST00000606170 KIF21BO75037 1637 aa27.88■■■□□ 2.05
PRDM16-209ENST00000606170 SAMD9Q5K651 1589 aa27.85■■■□□ 2.05
PRDM16-209ENST00000606170 EPRSP07814 1512 aaKnown RBP27.83■■■□□ 2.05
PRDM16-209ENST00000606170 GLI2P10070 1586 aa27.83■■■□□ 2.05
PRDM16-209ENST00000606170 ARID3CA6NKF2 412 aa27.81■■■□□ 2.04
PRDM16-209ENST00000606170 WDR7Q9Y4E6 1490 aa27.8■■■□□ 2.04
PRDM16-209ENST00000606170 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
PRDM16-209ENST00000606170 KDM6BO15054 1643 aa27.76■■■□□ 2.03
PRDM16-209ENST00000606170 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
PRDM16-209ENST00000606170 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
PRDM16-209ENST00000606170 PPRC1Q5VV67 1664 aaKnown RBP27.7■■■□□ 2.02
PRDM16-209ENST00000606170 MAP3K4Q9Y6R4 1608 aa27.7■■■□□ 2.02
PRDM16-209ENST00000606170 ATP10BO94823 1461 aa27.7■■■□□ 2.02
PRDM16-209ENST00000606170 RAPGEF6Q8TEU7 1601 aa27.68■■■□□ 2.02
PRDM16-209ENST00000606170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
PRDM16-209ENST00000606170 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
PRDM16-209ENST00000606170 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
PRDM16-209ENST00000606170 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
PRDM16-209ENST00000606170 TEX14Q8IWB6 1497 aa27.64■■■□□ 2.01
PRDM16-209ENST00000606170 CD109Q6YHK3 1445 aa27.61■■■□□ 2.01
PRDM16-209ENST00000606170 NUP153P49790 1475 aaKnown RBP27.59■■■□□ 2.01
PRDM16-209ENST00000606170 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
PRDM16-209ENST00000606170 COL17A1Q9UMD9 1497 aaPredicted RBP27.53■■■□□ 2
PRDM16-209ENST00000606170 MAGI3Q5TCQ9 1506 aa27.52■■■□□ 2
PRDM16-209ENST00000606170 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
PRDM16-209ENST00000606170 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
PRDM16-209ENST00000606170 PLEKHD1A6NEE1 506 aa27.47■■□□□ 1.99
PRDM16-209ENST00000606170 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
PRDM16-209ENST00000606170 ABCA9Q8IUA7 1624 aa27.42■■□□□ 1.98
PRDM16-209ENST00000606170 CDK13Q14004 1512 aaKnown RBP27.39■■□□□ 1.98
PRDM16-209ENST00000606170 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
PRDM16-209ENST00000606170 KDM4FA0A1W2PPD8 638 aa27.34■■□□□ 1.97
PRDM16-209ENST00000606170 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
PRDM16-209ENST00000606170 ARAP3Q8WWN8 1544 aa27.29■■□□□ 1.96
PRDM16-209ENST00000606170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.26■■□□□ 1.96
PRDM16-209ENST00000606170 NEO1Q92859 1461 aa27.26■■□□□ 1.95
PRDM16-209ENST00000606170 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
PRDM16-209ENST00000606170 CLIP1P30622 1438 aa27.24■■□□□ 1.95
PRDM16-209ENST00000606170 RAPGEF3O95398 923 aa27.23■■□□□ 1.95
PRDM16-209ENST00000606170 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
PRDM16-209ENST00000606170 ADGRL1O94910 1474 aa27.2■■□□□ 1.95
PRDM16-209ENST00000606170 FANCAO15360 1455 aa27.19■■□□□ 1.94
PRDM16-209ENST00000606170 CASKIN1Q8WXD9 1431 aa27.18■■□□□ 1.94
PRDM16-209ENST00000606170 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
PRDM16-209ENST00000606170 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
PRDM16-209ENST00000606170 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.94
PRDM16-209ENST00000606170 TROQ12816 1431 aaPredicted RBP27.14■■□□□ 1.93
PRDM16-209ENST00000606170 CFAP74Q9C0B2 1584 aa27.12■■□□□ 1.93
PRDM16-209ENST00000606170 PLCH2O75038 1416 aa27.11■■□□□ 1.93
PRDM16-209ENST00000606170 DENND4BO75064 1496 aaPredicted RBP27.11■■□□□ 1.93
PRDM16-209ENST00000606170 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
PRDM16-209ENST00000606170 KIF14Q15058 1648 aa27.1■■□□□ 1.93
PRDM16-209ENST00000606170 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
PRDM16-209ENST00000606170 FYCO1Q9BQS8 1478 aa27.08■■□□□ 1.93
PRDM16-209ENST00000606170 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
PRDM16-209ENST00000606170 MYO5CQ9NQX4 1742 aa27.03■■□□□ 1.92
PRDM16-209ENST00000606170 CEP162Q5TB80 1403 aa27.02■■□□□ 1.92
PRDM16-209ENST00000606170 SCAPERQ9BY12 1400 aa27.01■■□□□ 1.91
PRDM16-209ENST00000606170 RICTORQ6R327 1708 aa27.01■■□□□ 1.91
PRDM16-209ENST00000606170 LOC105371045A0A1W2PR82 267 aa26.99■■□□□ 1.91
PRDM16-209ENST00000606170 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms