RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
CTSA-211ENST00000606066 CSRNP3Q8WYN3 585 aa23.73■■□□□ 1.39
CTSA-211ENST00000606066 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
CTSA-211ENST00000606066 JPH4Q96JJ6 628 aa23.68■■□□□ 1.38
CTSA-211ENST00000606066 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
CTSA-211ENST00000606066 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
CTSA-211ENST00000606066 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
CTSA-211ENST00000606066 PRXQ9BXM0 1461 aa23.63■■□□□ 1.37
CTSA-211ENST00000606066 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
CTSA-211ENST00000606066 KIAA0586Q9BVV6 1533 aa23.59■■□□□ 1.37
CTSA-211ENST00000606066 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
CTSA-211ENST00000606066 NPM1P06748 294 aaKnown RBP eCLIP23.49■■□□□ 1.35
CTSA-211ENST00000606066 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.34
CTSA-211ENST00000606066 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
CTSA-211ENST00000606066 KIF21BO75037 1637 aa23.41■■□□□ 1.34
CTSA-211ENST00000606066 ABCC10Q5T3U5 1492 aa23.4■■□□□ 1.34
CTSA-211ENST00000606066 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
CTSA-211ENST00000606066 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
CTSA-211ENST00000606066 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
CTSA-211ENST00000606066 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.32
CTSA-211ENST00000606066 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
CTSA-211ENST00000606066 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
CTSA-211ENST00000606066 MAPKBP1O60336 1514 aa23.31■■□□□ 1.32
CTSA-211ENST00000606066 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.31
CTSA-211ENST00000606066 DISP1Q96F81 1524 aa23.25■■□□□ 1.31
CTSA-211ENST00000606066 PTPRGP23470 1445 aa23.25■■□□□ 1.31
CTSA-211ENST00000606066 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
CTSA-211ENST00000606066 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
CTSA-211ENST00000606066 TTBK1Q5TCY1 1321 aaPredicted RBP23.19■■□□□ 1.3
CTSA-211ENST00000606066 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
CTSA-211ENST00000606066 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
CTSA-211ENST00000606066 DIP2BQ9P265 1576 aa23.17■■□□□ 1.3
CTSA-211ENST00000606066 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
CTSA-211ENST00000606066 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
CTSA-211ENST00000606066 SAMD9Q5K651 1589 aa23.09■■□□□ 1.29
CTSA-211ENST00000606066 EFCAB5A4FU69 1503 aa23.08■■□□□ 1.29
CTSA-211ENST00000606066 ABCC2Q92887 1545 aa23.08■■□□□ 1.28
CTSA-211ENST00000606066 UACAQ9BZF9 1416 aa23.07■■□□□ 1.28
CTSA-211ENST00000606066 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
CTSA-211ENST00000606066 UHRF1BP1LA0JNW5 1464 aa23.05■■□□□ 1.28
CTSA-211ENST00000606066 ASXL2Q76L83 1435 aa23.03■■□□□ 1.28
CTSA-211ENST00000606066 KDM6BO15054 1643 aa23.01■■□□□ 1.27
CTSA-211ENST00000606066 LOC105371045A0A1W2PR82 267 aa23.01■■□□□ 1.27
CTSA-211ENST00000606066 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
CTSA-211ENST00000606066 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
CTSA-211ENST00000606066 GLI2P10070 1586 aa22.96■■□□□ 1.27
CTSA-211ENST00000606066 CLIP1P30622 1438 aa22.94■■□□□ 1.26
CTSA-211ENST00000606066 ABCA8O94911 1581 aa22.93■■□□□ 1.26
CTSA-211ENST00000606066 KDM5BQ9UGL1 1544 aa22.92■■□□□ 1.26
CTSA-211ENST00000606066 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
CTSA-211ENST00000606066 EPRSP07814 1512 aaKnown RBP22.88■■□□□ 1.25
CTSA-211ENST00000606066 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
CTSA-211ENST00000606066 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
CTSA-211ENST00000606066 RAPGEF6Q8TEU7 1601 aa22.84■■□□□ 1.25
CTSA-211ENST00000606066 TSPOAP1O95153 1857 aa22.83■■□□□ 1.25
CTSA-211ENST00000606066 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
CTSA-211ENST00000606066 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
CTSA-211ENST00000606066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
CTSA-211ENST00000606066 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
CTSA-211ENST00000606066 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
CTSA-211ENST00000606066 ATP10BO94823 1461 aa22.79■■□□□ 1.24
CTSA-211ENST00000606066 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
CTSA-211ENST00000606066 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
CTSA-211ENST00000606066 PPRC1Q5VV67 1664 aaKnown RBP22.77■■□□□ 1.24
CTSA-211ENST00000606066 ADGRL1O94910 1474 aa22.74■■□□□ 1.23
CTSA-211ENST00000606066 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
CTSA-211ENST00000606066 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
CTSA-211ENST00000606066 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
CTSA-211ENST00000606066 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
CTSA-211ENST00000606066 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.22
CTSA-211ENST00000606066 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
CTSA-211ENST00000606066 CD109Q6YHK3 1445 aa22.7■■□□□ 1.22
CTSA-211ENST00000606066 ILDR1Q86SU0 546 aaPredicted RBP22.69■■□□□ 1.22
CTSA-211ENST00000606066 CDK11AQ9UQ88 783 aaPredicted RBP22.68■■□□□ 1.22
CTSA-211ENST00000606066 MAGI3Q5TCQ9 1506 aa22.67■■□□□ 1.22
CTSA-211ENST00000606066 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
CTSA-211ENST00000606066 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
CTSA-211ENST00000606066 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
CTSA-211ENST00000606066 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
CTSA-211ENST00000606066 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
CTSA-211ENST00000606066 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
CTSA-211ENST00000606066 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
CTSA-211ENST00000606066 ARAP3Q8WWN8 1544 aa22.51■■□□□ 1.19
CTSA-211ENST00000606066 CFAP43Q8NDM7 1665 aa22.47■■□□□ 1.19
CTSA-211ENST00000606066 LRRIQ1Q96JM4 1722 aa22.46■■□□□ 1.19
CTSA-211ENST00000606066 APLP2Q06481 763 aa22.45■■□□□ 1.18
CTSA-211ENST00000606066 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
CTSA-211ENST00000606066 MTUS2Q5JR59 1369 aa22.44■■□□□ 1.18
CTSA-211ENST00000606066 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
CTSA-211ENST00000606066 RAPGEF3O95398 923 aa22.41■■□□□ 1.18
CTSA-211ENST00000606066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
CTSA-211ENST00000606066 KIF14Q15058 1648 aa22.4■■□□□ 1.18
CTSA-211ENST00000606066 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
CTSA-211ENST00000606066 NEO1Q92859 1461 aa22.36■■□□□ 1.17
CTSA-211ENST00000606066 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
CTSA-211ENST00000606066 PLCH2O75038 1416 aa22.34■■□□□ 1.17
CTSA-211ENST00000606066 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
CTSA-211ENST00000606066 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.17
CTSA-211ENST00000606066 EFCAB2Q5VUJ9 269 aa22.31■■□□□ 1.16
CTSA-211ENST00000606066 LRRC9Q6ZRR7 1453 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms