RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 IGF1RP08069 1367 aa21.23■□□□□ 0.99
CTSA-210ENST00000606000 PRG4Q92954 1404 aaPredicted RBP21.1■□□□□ 0.97
CTSA-210ENST00000606000 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
CTSA-210ENST00000606000 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
CTSA-210ENST00000606000 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
CTSA-210ENST00000606000 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
CTSA-210ENST00000606000 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
CTSA-210ENST00000606000 IQGAP2Q13576 1575 aa20.96■□□□□ 0.95
CTSA-210ENST00000606000 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
CTSA-210ENST00000606000 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
CTSA-210ENST00000606000 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
CTSA-210ENST00000606000 DISP1Q96F81 1524 aa20.83■□□□□ 0.93
CTSA-210ENST00000606000 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
CTSA-210ENST00000606000 UGGT2Q9NYU1 1516 aa20.81■□□□□ 0.92
CTSA-210ENST00000606000 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
CTSA-210ENST00000606000 KIAA0556O60303 1618 aa20.79■□□□□ 0.92
CTSA-210ENST00000606000 KIF13AQ9H1H9 1805 aa20.78■□□□□ 0.92
CTSA-210ENST00000606000 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
CTSA-210ENST00000606000 PTPRGP23470 1445 aa20.77■□□□□ 0.91
CTSA-210ENST00000606000 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
CTSA-210ENST00000606000 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
CTSA-210ENST00000606000 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
CTSA-210ENST00000606000 EEA1Q15075 1411 aa20.69■□□□□ 0.9
CTSA-210ENST00000606000 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
CTSA-210ENST00000606000 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
CTSA-210ENST00000606000 ABCC2Q92887 1545 aa20.65■□□□□ 0.9
CTSA-210ENST00000606000 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
CTSA-210ENST00000606000 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
CTSA-210ENST00000606000 UHRF1BP1LA0JNW5 1464 aa20.63■□□□□ 0.89
CTSA-210ENST00000606000 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
CTSA-210ENST00000606000 KIF21BO75037 1637 aa20.6■□□□□ 0.89
CTSA-210ENST00000606000 ZCCHC11Q5TAX3 1644 aaKnown RBP20.6■□□□□ 0.89
CTSA-210ENST00000606000 PLB1Q6P1J6 1458 aa20.59■□□□□ 0.89
CTSA-210ENST00000606000 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
CTSA-210ENST00000606000 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
CTSA-210ENST00000606000 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
CTSA-210ENST00000606000 ABCA8O94911 1581 aa20.56■□□□□ 0.88
CTSA-210ENST00000606000 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
CTSA-210ENST00000606000 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
CTSA-210ENST00000606000 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
CTSA-210ENST00000606000 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
CTSA-210ENST00000606000 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
CTSA-210ENST00000606000 PPRC1Q5VV67 1664 aaKnown RBP20.47■□□□□ 0.87
CTSA-210ENST00000606000 GLI2P10070 1586 aa20.46■□□□□ 0.87
CTSA-210ENST00000606000 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
CTSA-210ENST00000606000 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
CTSA-210ENST00000606000 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
CTSA-210ENST00000606000 MAP3K4Q9Y6R4 1608 aa20.42■□□□□ 0.86
CTSA-210ENST00000606000 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
CTSA-210ENST00000606000 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
CTSA-210ENST00000606000 KDM6BO15054 1643 aa20.39■□□□□ 0.86
CTSA-210ENST00000606000 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
CTSA-210ENST00000606000 ATP10BO94823 1461 aa20.36■□□□□ 0.85
CTSA-210ENST00000606000 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
CTSA-210ENST00000606000 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
CTSA-210ENST00000606000 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
CTSA-210ENST00000606000 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
CTSA-210ENST00000606000 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
CTSA-210ENST00000606000 TEX14Q8IWB6 1497 aa20.24■□□□□ 0.83
CTSA-210ENST00000606000 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
CTSA-210ENST00000606000 CD109Q6YHK3 1445 aa20.22■□□□□ 0.83
CTSA-210ENST00000606000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
CTSA-210ENST00000606000 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
CTSA-210ENST00000606000 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
CTSA-210ENST00000606000 ABCA9Q8IUA7 1624 aa20.2■□□□□ 0.82
CTSA-210ENST00000606000 MAGI3Q5TCQ9 1506 aa20.2■□□□□ 0.82
CTSA-210ENST00000606000 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
CTSA-210ENST00000606000 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
CTSA-210ENST00000606000 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
CTSA-210ENST00000606000 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
CTSA-210ENST00000606000 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
CTSA-210ENST00000606000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.81
CTSA-210ENST00000606000 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
CTSA-210ENST00000606000 PLEKHD1A6NEE1 506 aa20.06■□□□□ 0.8
CTSA-210ENST00000606000 CLIP1P30622 1438 aa20.05■□□□□ 0.8
CTSA-210ENST00000606000 KIF14Q15058 1648 aa20.03■□□□□ 0.8
CTSA-210ENST00000606000 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
CTSA-210ENST00000606000 FRMPD1Q5SYB0 1578 aa20.01■□□□□ 0.79
CTSA-210ENST00000606000 NEO1Q92859 1461 aa20■□□□□ 0.79
CTSA-210ENST00000606000 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
CTSA-210ENST00000606000 KDM4FA0A1W2PPD8 638 aa19.98■□□□□ 0.79
CTSA-210ENST00000606000 ADGRL1O94910 1474 aa19.96■□□□□ 0.79
CTSA-210ENST00000606000 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
CTSA-210ENST00000606000 MYO5CQ9NQX4 1742 aa19.96■□□□□ 0.79
CTSA-210ENST00000606000 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
CTSA-210ENST00000606000 FANCAO15360 1455 aa19.95■□□□□ 0.78
CTSA-210ENST00000606000 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
CTSA-210ENST00000606000 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
CTSA-210ENST00000606000 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
CTSA-210ENST00000606000 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
CTSA-210ENST00000606000 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
CTSA-210ENST00000606000 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
CTSA-210ENST00000606000 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
CTSA-210ENST00000606000 PLCH2O75038 1416 aa19.89■□□□□ 0.77
CTSA-210ENST00000606000 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
CTSA-210ENST00000606000 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
CTSA-210ENST00000606000 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
CTSA-210ENST00000606000 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
CTSA-210ENST00000606000 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
CTSA-210ENST00000606000 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms