RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CARMIL1Q5VZK9 1371 aa32.6■■■□□ 2.81
SRSF4-206ENST00000605204 KIF13AQ9H1H9 1805 aa32.59■■■□□ 2.81
SRSF4-206ENST00000605204 PRG4Q92954 1404 aaPredicted RBP32.58■■■□□ 2.81
SRSF4-206ENST00000605204 KIAA0586Q9BVV6 1533 aa32.48■■■□□ 2.79
SRSF4-206ENST00000605204 JPH4Q96JJ6 628 aa32.44■■■□□ 2.78
SRSF4-206ENST00000605204 RAPGEF2Q9Y4G8 1499 aa32.41■■■□□ 2.78
SRSF4-206ENST00000605204 ADCY10Q96PN6 1610 aa32.41■■■□□ 2.78
SRSF4-206ENST00000605204 EEA1Q15075 1411 aa32.32■■■□□ 2.77
SRSF4-206ENST00000605204 MAPKBP1O60336 1514 aa32.32■■■□□ 2.76
SRSF4-206ENST00000605204 DIP2BQ9P265 1576 aa32.31■■■□□ 2.76
SRSF4-206ENST00000605204 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
SRSF4-206ENST00000605204 IQGAP2Q13576 1575 aa32.26■■■□□ 2.75
SRSF4-206ENST00000605204 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
SRSF4-206ENST00000605204 AEBP2Q6ZN18 517 aaPredicted RBP32.2■■■□□ 2.75
SRSF4-206ENST00000605204 CARMIL2Q6F5E8 1435 aa32.18■■■□□ 2.74
SRSF4-206ENST00000605204 CSRNP3Q8WYN3 585 aa32.18■■■□□ 2.74
SRSF4-206ENST00000605204 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
SRSF4-206ENST00000605204 UGGT2Q9NYU1 1516 aa32.1■■■□□ 2.73
SRSF4-206ENST00000605204 FAM69CQ0P6D2 419 aa32.08■■■□□ 2.73
SRSF4-206ENST00000605204 TSPOAP1O95153 1857 aa32.06■■■□□ 2.72
SRSF4-206ENST00000605204 TNIKQ9UKE5 1360 aa32.05■■■□□ 2.72
SRSF4-206ENST00000605204 CTTNBP2Q8WZ74 1663 aa32.03■■■□□ 2.72
SRSF4-206ENST00000605204 PTPRGP23470 1445 aa32.02■■■□□ 2.72
SRSF4-206ENST00000605204 NPM1P06748 294 aaKnown RBP eCLIP32.01■■■□□ 2.71
SRSF4-206ENST00000605204 KDM6BO15054 1643 aa32.01■■■□□ 2.71
SRSF4-206ENST00000605204 DISP1Q96F81 1524 aa32■■■□□ 2.71
SRSF4-206ENST00000605204 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
SRSF4-206ENST00000605204 ABCC2Q92887 1545 aa31.96■■■□□ 2.71
SRSF4-206ENST00000605204 KIAA0556O60303 1618 aa31.93■■■□□ 2.7
SRSF4-206ENST00000605204 PPRC1Q5VV67 1664 aaKnown RBP31.92■■■□□ 2.7
SRSF4-206ENST00000605204 TTBK1Q5TCY1 1321 aaPredicted RBP31.91■■■□□ 2.7
SRSF4-206ENST00000605204 KIF21BO75037 1637 aa31.89■■■□□ 2.7
SRSF4-206ENST00000605204 FAM9AQ8IZU1 332 aaPredicted RBP31.88■■■□□ 2.69
SRSF4-206ENST00000605204 UHRF1BP1LA0JNW5 1464 aa31.85■■■□□ 2.69
SRSF4-206ENST00000605204 ASXL2Q76L83 1435 aa31.85■■■□□ 2.69
SRSF4-206ENST00000605204 GLI2P10070 1586 aa31.81■■■□□ 2.68
SRSF4-206ENST00000605204 UACAQ9BZF9 1416 aa31.8■■■□□ 2.68
SRSF4-206ENST00000605204 ZCCHC11Q5TAX3 1644 aaKnown RBP31.78■■■□□ 2.68
SRSF4-206ENST00000605204 PLB1Q6P1J6 1458 aa31.77■■■□□ 2.68
SRSF4-206ENST00000605204 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
SRSF4-206ENST00000605204 MAP3K4Q9Y6R4 1608 aa31.72■■■□□ 2.67
SRSF4-206ENST00000605204 EPRSP07814 1512 aaKnown RBP31.68■■■□□ 2.66
SRSF4-206ENST00000605204 SAMD9Q5K651 1589 aa31.67■■■□□ 2.66
SRSF4-206ENST00000605204 KDM4FA0A1W2PPD8 638 aa31.64■■■□□ 2.66
SRSF4-206ENST00000605204 EFCAB5A4FU69 1503 aa31.59■■■□□ 2.65
SRSF4-206ENST00000605204 ABCA8O94911 1581 aa31.59■■■□□ 2.65
SRSF4-206ENST00000605204 COL17A1Q9UMD9 1497 aaPredicted RBP31.58■■■□□ 2.65
SRSF4-206ENST00000605204 UBTFP17480 764 aaKnown RBP31.56■■■□□ 2.64
SRSF4-206ENST00000605204 WDR7Q9Y4E6 1490 aa31.54■■■□□ 2.64
SRSF4-206ENST00000605204 P3H3Q8IVL6 736 aa31.5■■■□□ 2.63
SRSF4-206ENST00000605204 ADGRL1O94910 1474 aa31.47■■■□□ 2.63
SRSF4-206ENST00000605204 TEX14Q8IWB6 1497 aa31.47■■■□□ 2.63
SRSF4-206ENST00000605204 FHOD3Q2V2M9 1422 aa31.43■■■□□ 2.62
SRSF4-206ENST00000605204 RANGAP1P46060 587 aaPredicted RBP31.43■■■□□ 2.62
SRSF4-206ENST00000605204 CFAP43Q8NDM7 1665 aa31.41■■■□□ 2.62
SRSF4-206ENST00000605204 RAPGEF6Q8TEU7 1601 aa31.38■■■□□ 2.61
SRSF4-206ENST00000605204 EHMT2Q96KQ7 1210 aa31.38■■■□□ 2.61
SRSF4-206ENST00000605204 MAGI3Q5TCQ9 1506 aa31.31■■■□□ 2.6
SRSF4-206ENST00000605204 ATP10BO94823 1461 aa31.31■■■□□ 2.6
SRSF4-206ENST00000605204 FMN1Q68DA7 1419 aa31.3■■■□□ 2.6
SRSF4-206ENST00000605204 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
SRSF4-206ENST00000605204 NUP153P49790 1475 aaKnown RBP31.28■■■□□ 2.6
SRSF4-206ENST00000605204 CD109Q6YHK3 1445 aa31.25■■■□□ 2.59
SRSF4-206ENST00000605204 ARID3CA6NKF2 412 aa31.17■■■□□ 2.58
SRSF4-206ENST00000605204 KCNH8Q96L42 1107 aa31.17■■■□□ 2.58
SRSF4-206ENST00000605204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.15■■■□□ 2.58
SRSF4-206ENST00000605204 HNRNPUL2Q1KMD3 747 aaKnown RBP31.15■■■□□ 2.58
SRSF4-206ENST00000605204 ABCA9Q8IUA7 1624 aa31.15■■■□□ 2.58
SRSF4-206ENST00000605204 HECW2Q9P2P5 1572 aa31.14■■■□□ 2.58
SRSF4-206ENST00000605204 HECW1Q76N89 1606 aa31.12■■■□□ 2.57
SRSF4-206ENST00000605204 CLIP1P30622 1438 aa31.1■■■□□ 2.57
SRSF4-206ENST00000605204 PLEKHD1A6NEE1 506 aa31.07■■■□□ 2.56
SRSF4-206ENST00000605204 ARAP3Q8WWN8 1544 aa31.06■■■□□ 2.56
SRSF4-206ENST00000605204 FRMPD1Q5SYB0 1578 aa31.02■■■□□ 2.56
SRSF4-206ENST00000605204 CASKIN1Q8WXD9 1431 aa31■■■□□ 2.55
SRSF4-206ENST00000605204 CDK11AQ9UQ88 783 aaPredicted RBP30.99■■■□□ 2.55
SRSF4-206ENST00000605204 CDK13Q14004 1512 aaKnown RBP30.98■■■□□ 2.55
SRSF4-206ENST00000605204 ATP1B4Q9UN42 357 aaPredicted RBP30.96■■■□□ 2.55
SRSF4-206ENST00000605204 PHLDB1Q86UU1 1377 aa30.95■■■□□ 2.54
SRSF4-206ENST00000605204 CCDC18Q5T9S5 1454 aa30.94■■■□□ 2.54
SRSF4-206ENST00000605204 FYCO1Q9BQS8 1478 aa30.94■■■□□ 2.54
SRSF4-206ENST00000605204 CEP162Q5TB80 1403 aa30.92■■■□□ 2.54
SRSF4-206ENST00000605204 PCF11O94913 1555 aaKnown RBP30.91■■■□□ 2.54
SRSF4-206ENST00000605204 NEO1Q92859 1461 aa30.9■■■□□ 2.54
SRSF4-206ENST00000605204 ADAMTSL3P82987 1691 aa30.88■■■□□ 2.53
SRSF4-206ENST00000605204 TTC37Q6PGP7 1564 aa30.84■■■□□ 2.53
SRSF4-206ENST00000605204 TROQ12816 1431 aaPredicted RBP30.84■■■□□ 2.53
SRSF4-206ENST00000605204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.83■■■□□ 2.539e-8■■□□□ 12.5
SRSF4-206ENST00000605204 ARHGEF40Q8TER5 1519 aa30.82■■■□□ 2.53
SRSF4-206ENST00000605204 ILDR1Q86SU0 546 aaPredicted RBP30.82■■■□□ 2.52
SRSF4-206ENST00000605204 RICTORQ6R327 1708 aa30.81■■■□□ 2.52
SRSF4-206ENST00000605204 BCORL1Q5H9F3 1711 aa30.8■■■□□ 2.52
SRSF4-206ENST00000605204 RAPGEF3O95398 923 aa30.79■■■□□ 2.52
SRSF4-206ENST00000605204 MADDQ8WXG6 1647 aa30.78■■■□□ 2.52
SRSF4-206ENST00000605204 KIF14Q15058 1648 aa30.78■■■□□ 2.52
SRSF4-206ENST00000605204 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.51
SRSF4-206ENST00000605204 PTPRMP28827 1452 aa30.75■■■□□ 2.51
SRSF4-206ENST00000605204 LRRIQ1Q96JM4 1722 aa30.74■■■□□ 2.51
SRSF4-206ENST00000605204 LOC105371045A0A1W2PR82 267 aa30.73■■■□□ 2.51
SRSF4-206ENST00000605204 FANCAO15360 1455 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms