RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
UBE3B-213ENST00000605142 MAPKBP1O60336 1514 aa21.21■□□□□ 0.99
UBE3B-213ENST00000605142 FAM69CQ0P6D2 419 aa21.19■□□□□ 0.98
UBE3B-213ENST00000605142 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
UBE3B-213ENST00000605142 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
UBE3B-213ENST00000605142 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
UBE3B-213ENST00000605142 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.97
UBE3B-213ENST00000605142 IGF1RP08069 1367 aa21.07■□□□□ 0.96
UBE3B-213ENST00000605142 KDM6BO15054 1643 aa21.06■□□□□ 0.96
UBE3B-213ENST00000605142 ADCY10Q96PN6 1610 aa21.06■□□□□ 0.96
UBE3B-213ENST00000605142 KIF27Q86VH2 1401 aa21.01■□□□□ 0.95
UBE3B-213ENST00000605142 KIAA0586Q9BVV6 1533 aa21■□□□□ 0.95
UBE3B-213ENST00000605142 CUL7Q14999 1698 aa20.98■□□□□ 0.95
UBE3B-213ENST00000605142 ILDR1Q86SU0 546 aaPredicted RBP20.92■□□□□ 0.94
UBE3B-213ENST00000605142 TSPOAP1O95153 1857 aa20.91■□□□□ 0.94
UBE3B-213ENST00000605142 CARMIL1Q5VZK9 1371 aa20.89■□□□□ 0.93
UBE3B-213ENST00000605142 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
UBE3B-213ENST00000605142 PTPRGP23470 1445 aa20.87■□□□□ 0.93
UBE3B-213ENST00000605142 GLI2P10070 1586 aa20.86■□□□□ 0.93
UBE3B-213ENST00000605142 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
UBE3B-213ENST00000605142 PLB1Q6P1J6 1458 aa20.84■□□□□ 0.93
UBE3B-213ENST00000605142 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
UBE3B-213ENST00000605142 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
UBE3B-213ENST00000605142 UHRF1BP1LA0JNW5 1464 aa20.8■□□□□ 0.92
UBE3B-213ENST00000605142 ASXL2Q76L83 1435 aa20.79■□□□□ 0.92
UBE3B-213ENST00000605142 PPRC1Q5VV67 1664 aaKnown RBP20.79■□□□□ 0.92
UBE3B-213ENST00000605142 ADGRL1O94910 1474 aa20.78■□□□□ 0.92
UBE3B-213ENST00000605142 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
UBE3B-213ENST00000605142 DISP1Q96F81 1524 aa20.72■□□□□ 0.91
UBE3B-213ENST00000605142 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
UBE3B-213ENST00000605142 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
UBE3B-213ENST00000605142 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
UBE3B-213ENST00000605142 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
UBE3B-213ENST00000605142 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
UBE3B-213ENST00000605142 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
UBE3B-213ENST00000605142 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
UBE3B-213ENST00000605142 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
UBE3B-213ENST00000605142 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
UBE3B-213ENST00000605142 HECW2Q9P2P5 1572 aa20.64■□□□□ 0.9
UBE3B-213ENST00000605142 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
UBE3B-213ENST00000605142 ZCCHC11Q5TAX3 1644 aaKnown RBP20.56■□□□□ 0.88
UBE3B-213ENST00000605142 CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
UBE3B-213ENST00000605142 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
UBE3B-213ENST00000605142 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
UBE3B-213ENST00000605142 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
UBE3B-213ENST00000605142 CD109Q6YHK3 1445 aa20.45■□□□□ 0.86
UBE3B-213ENST00000605142 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
UBE3B-213ENST00000605142 ABCA8O94911 1581 aa20.43■□□□□ 0.86
UBE3B-213ENST00000605142 FBXO41Q8TF61 875 aa20.43■□□□□ 0.86
UBE3B-213ENST00000605142 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
UBE3B-213ENST00000605142 ARAP3Q8WWN8 1544 aa20.37■□□□□ 0.85
UBE3B-213ENST00000605142 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
UBE3B-213ENST00000605142 EEA1Q15075 1411 aa20.33■□□□□ 0.84
UBE3B-213ENST00000605142 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
UBE3B-213ENST00000605142 KIF21BO75037 1637 aa20.31■□□□□ 0.84
UBE3B-213ENST00000605142 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
UBE3B-213ENST00000605142 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
UBE3B-213ENST00000605142 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
UBE3B-213ENST00000605142 ADAMTSL3P82987 1691 aa20.27■□□□□ 0.84
UBE3B-213ENST00000605142 PTPRMP28827 1452 aa20.27■□□□□ 0.84
UBE3B-213ENST00000605142 ATP10BO94823 1461 aa20.25■□□□□ 0.83
UBE3B-213ENST00000605142 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
UBE3B-213ENST00000605142 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
UBE3B-213ENST00000605142 ABCA9Q8IUA7 1624 aa20.2■□□□□ 0.82
UBE3B-213ENST00000605142 NEO1Q92859 1461 aa20.19■□□□□ 0.82
UBE3B-213ENST00000605142 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
UBE3B-213ENST00000605142 PCF11O94913 1555 aaKnown RBP20.17■□□□□ 0.82
UBE3B-213ENST00000605142 BCORL1Q5H9F3 1711 aa20.15■□□□□ 0.82
UBE3B-213ENST00000605142 NUP153P49790 1475 aaKnown RBP20.14■□□□□ 0.81
UBE3B-213ENST00000605142 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
UBE3B-213ENST00000605142 LMTK3Q96Q04 1460 aa20.12■□□□□ 0.81
UBE3B-213ENST00000605142 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
UBE3B-213ENST00000605142 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
UBE3B-213ENST00000605142 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
UBE3B-213ENST00000605142 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
UBE3B-213ENST00000605142 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
UBE3B-213ENST00000605142 ARHGEF40Q8TER5 1519 aa20.02■□□□□ 0.8
UBE3B-213ENST00000605142 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.79
UBE3B-213ENST00000605142 DENND4BO75064 1496 aaPredicted RBP20■□□□□ 0.79
UBE3B-213ENST00000605142 POGZQ7Z3K3 1410 aa19.99■□□□□ 0.79
UBE3B-213ENST00000605142 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
UBE3B-213ENST00000605142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
UBE3B-213ENST00000605142 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
UBE3B-213ENST00000605142 RICTORQ6R327 1708 aa19.98■□□□□ 0.79
UBE3B-213ENST00000605142 FANCAO15360 1455 aa19.97■□□□□ 0.79
UBE3B-213ENST00000605142 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
UBE3B-213ENST00000605142 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
UBE3B-213ENST00000605142 ZMYM4Q5VZL5 1548 aa19.95■□□□□ 0.78
UBE3B-213ENST00000605142 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
UBE3B-213ENST00000605142 MAGI2Q86UL8 1455 aa19.94■□□□□ 0.78
UBE3B-213ENST00000605142 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
UBE3B-213ENST00000605142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
UBE3B-213ENST00000605142 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
UBE3B-213ENST00000605142 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
UBE3B-213ENST00000605142 HSPA2P54652 639 aa19.93■□□□□ 0.78
UBE3B-213ENST00000605142 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
UBE3B-213ENST00000605142 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
UBE3B-213ENST00000605142 ZFYVE16Q7Z3T8 1539 aa19.88■□□□□ 0.77
UBE3B-213ENST00000605142 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
UBE3B-213ENST00000605142 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms