RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
TUBE1-210ENST00000604967 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
TUBE1-210ENST00000604967 KIAA0586Q9BVV6 1533 aa18.35■□□□□ 0.53
TUBE1-210ENST00000604967 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
TUBE1-210ENST00000604967 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
TUBE1-210ENST00000604967 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
TUBE1-210ENST00000604967 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
TUBE1-210ENST00000604967 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
TUBE1-210ENST00000604967 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
TUBE1-210ENST00000604967 UGGT2Q9NYU1 1516 aa18.14■□□□□ 0.49
TUBE1-210ENST00000604967 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
TUBE1-210ENST00000604967 PTPRGP23470 1445 aa18.11■□□□□ 0.49
TUBE1-210ENST00000604967 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
TUBE1-210ENST00000604967 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-210ENST00000604967 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
TUBE1-210ENST00000604967 KIAA0556O60303 1618 aa18.08■□□□□ 0.48
TUBE1-210ENST00000604967 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
TUBE1-210ENST00000604967 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
TUBE1-210ENST00000604967 FAM9AQ8IZU1 332 aaPredicted RBP18.05■□□□□ 0.48
TUBE1-210ENST00000604967 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
TUBE1-210ENST00000604967 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
TUBE1-210ENST00000604967 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
TUBE1-210ENST00000604967 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
TUBE1-210ENST00000604967 EEA1Q15075 1411 aa17.99■□□□□ 0.47
TUBE1-210ENST00000604967 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
TUBE1-210ENST00000604967 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
TUBE1-210ENST00000604967 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
TUBE1-210ENST00000604967 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
TUBE1-210ENST00000604967 NPM1P06748 294 aaKnown RBP eCLIP17.94■□□□□ 0.46
TUBE1-210ENST00000604967 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
TUBE1-210ENST00000604967 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
TUBE1-210ENST00000604967 ASXL2Q76L83 1435 aa17.92■□□□□ 0.46
TUBE1-210ENST00000604967 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
TUBE1-210ENST00000604967 ABCA8O94911 1581 aa17.91■□□□□ 0.46
TUBE1-210ENST00000604967 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
TUBE1-210ENST00000604967 KIF21BO75037 1637 aa17.91■□□□□ 0.46
TUBE1-210ENST00000604967 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
TUBE1-210ENST00000604967 ZCCHC11Q5TAX3 1644 aaKnown RBP17.89■□□□□ 0.45
TUBE1-210ENST00000604967 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
TUBE1-210ENST00000604967 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
TUBE1-210ENST00000604967 PPRC1Q5VV67 1664 aaKnown RBP17.82■□□□□ 0.44
TUBE1-210ENST00000604967 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
TUBE1-210ENST00000604967 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
TUBE1-210ENST00000604967 GLI2P10070 1586 aa17.81■□□□□ 0.44
TUBE1-210ENST00000604967 TSPOAP1O95153 1857 aa17.79■□□□□ 0.44
TUBE1-210ENST00000604967 ATP10BO94823 1461 aa17.78■□□□□ 0.44
TUBE1-210ENST00000604967 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
TUBE1-210ENST00000604967 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
TUBE1-210ENST00000604967 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
TUBE1-210ENST00000604967 NUP153P49790 1475 aaKnown RBP17.74■□□□□ 0.43
TUBE1-210ENST00000604967 COL17A1Q9UMD9 1497 aaPredicted RBP17.73■□□□□ 0.43
TUBE1-210ENST00000604967 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
TUBE1-210ENST00000604967 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
TUBE1-210ENST00000604967 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
TUBE1-210ENST00000604967 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
TUBE1-210ENST00000604967 KDM6BO15054 1643 aa17.68■□□□□ 0.42
TUBE1-210ENST00000604967 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
TUBE1-210ENST00000604967 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
TUBE1-210ENST00000604967 CDK13Q14004 1512 aaKnown RBP17.6■□□□□ 0.41
TUBE1-210ENST00000604967 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
TUBE1-210ENST00000604967 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
TUBE1-210ENST00000604967 ABCA9Q8IUA7 1624 aa17.57■□□□□ 0.4
TUBE1-210ENST00000604967 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
TUBE1-210ENST00000604967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
TUBE1-210ENST00000604967 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
TUBE1-210ENST00000604967 LRRIQ1Q96JM4 1722 aa17.54■□□□□ 0.4
TUBE1-210ENST00000604967 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
TUBE1-210ENST00000604967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.39
TUBE1-210ENST00000604967 KDM4FA0A1W2PPD8 638 aa17.49■□□□□ 0.39
TUBE1-210ENST00000604967 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
TUBE1-210ENST00000604967 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
TUBE1-210ENST00000604967 PCF11O94913 1555 aaKnown RBP17.48■□□□□ 0.39
TUBE1-210ENST00000604967 CLIP1P30622 1438 aa17.47■□□□□ 0.39
TUBE1-210ENST00000604967 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
TUBE1-210ENST00000604967 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
TUBE1-210ENST00000604967 ATP1B4Q9UN42 357 aaPredicted RBP17.45■□□□□ 0.38
TUBE1-210ENST00000604967 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
TUBE1-210ENST00000604967 FRMPD1Q5SYB0 1578 aa17.43■□□□□ 0.38
TUBE1-210ENST00000604967 KIF14Q15058 1648 aa17.43■□□□□ 0.38
TUBE1-210ENST00000604967 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
TUBE1-210ENST00000604967 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
TUBE1-210ENST00000604967 NEO1Q92859 1461 aa17.41■□□□□ 0.38
TUBE1-210ENST00000604967 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
TUBE1-210ENST00000604967 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
TUBE1-210ENST00000604967 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
TUBE1-210ENST00000604967 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
TUBE1-210ENST00000604967 PLCH2O75038 1416 aa17.36■□□□□ 0.37
TUBE1-210ENST00000604967 AKNAQ7Z591 1439 aa17.36■□□□□ 0.37
TUBE1-210ENST00000604967 FANCAO15360 1455 aa17.36■□□□□ 0.37
TUBE1-210ENST00000604967 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
TUBE1-210ENST00000604967 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
TUBE1-210ENST00000604967 RICTORQ6R327 1708 aa17.32■□□□□ 0.36
TUBE1-210ENST00000604967 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
TUBE1-210ENST00000604967 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
TUBE1-210ENST00000604967 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
TUBE1-210ENST00000604967 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.36
TUBE1-210ENST00000604967 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.35
TUBE1-210ENST00000604967 SCAPERQ9BY12 1400 aa17.26■□□□□ 0.35
TUBE1-210ENST00000604967 YEATS2Q9ULM3 1422 aa17.26■□□□□ 0.35
TUBE1-210ENST00000604967 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms