RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 CSRNP3Q8WYN3 585 aa39.87■■■■□ 3.97
FOCAD-211ENST00000604036 KIAA0586Q9BVV6 1533 aa39.86■■■■□ 3.97
FOCAD-211ENST00000604036 CYB5RLQ6IPT4 315 aa39.85■■■■□ 3.97
FOCAD-211ENST00000604036 JPH4Q96JJ6 628 aa39.85■■■■□ 3.97
FOCAD-211ENST00000604036 ARAP1Q96P48 1450 aa39.84■■■■□ 3.97
FOCAD-211ENST00000604036 FAM9AQ8IZU1 332 aaPredicted RBP39.84■■■■□ 3.97
FOCAD-211ENST00000604036 PRXQ9BXM0 1461 aa39.81■■■■□ 3.96
FOCAD-211ENST00000604036 ERCC6L2Q5T890 1561 aa39.79■■■■□ 3.96
FOCAD-211ENST00000604036 PRG4Q92954 1404 aaPredicted RBP39.75■■■■□ 3.95
FOCAD-211ENST00000604036 IQGAP2Q13576 1575 aa39.67■■■■□ 3.94
FOCAD-211ENST00000604036 CTTNBP2Q8WZ74 1663 aa39.6■■■■□ 3.93
FOCAD-211ENST00000604036 TRHP20396 242 aaPredicted RBP39.53■■■■□ 3.92
FOCAD-211ENST00000604036 KIF21BO75037 1637 aa39.47■■■■□ 3.91
FOCAD-211ENST00000604036 CARMIL2Q6F5E8 1435 aa39.46■■■■□ 3.91
FOCAD-211ENST00000604036 UGGT2Q9NYU1 1516 aa39.44■■■■□ 3.9
FOCAD-211ENST00000604036 DISP1Q96F81 1524 aa39.37■■■■□ 3.89
FOCAD-211ENST00000604036 EHMT2Q96KQ7 1210 aa39.35■■■■□ 3.89
FOCAD-211ENST00000604036 TTBK1Q5TCY1 1321 aaPredicted RBP39.33■■■■□ 3.89
FOCAD-211ENST00000604036 TNIKQ9UKE5 1360 aa39.32■■■■□ 3.88
FOCAD-211ENST00000604036 PTPRGP23470 1445 aa39.29■■■■□ 3.88
FOCAD-211ENST00000604036 KIAA0556O60303 1618 aa39.29■■■■□ 3.88
FOCAD-211ENST00000604036 GOLGA3Q08378 1498 aa39.25■■■■□ 3.87
FOCAD-211ENST00000604036 UBTFP17480 764 aaKnown RBP39.22■■■■□ 3.87
FOCAD-211ENST00000604036 RANGAP1P46060 587 aaPredicted RBP39.15■■■■□ 3.86
FOCAD-211ENST00000604036 ADCY10Q96PN6 1610 aa39.11■■■■□ 3.85
FOCAD-211ENST00000604036 P3H3Q8IVL6 736 aa39.1■■■■□ 3.85
FOCAD-211ENST00000604036 SAMD9Q5K651 1589 aa39.05■■■■□ 3.84
FOCAD-211ENST00000604036 NPM1P06748 294 aaKnown RBP eCLIP39.05■■■■□ 3.84
FOCAD-211ENST00000604036 UACAQ9BZF9 1416 aa39.02■■■■□ 3.84
FOCAD-211ENST00000604036 UHRF1BP1LA0JNW5 1464 aa38.95■■■■□ 3.83
FOCAD-211ENST00000604036 ABCC2Q92887 1545 aa38.94■■■■□ 3.82
FOCAD-211ENST00000604036 PLB1Q6P1J6 1458 aa38.9■■■■□ 3.82
FOCAD-211ENST00000604036 EFCAB5A4FU69 1503 aa38.89■■■■□ 3.82
FOCAD-211ENST00000604036 FHOD3Q2V2M9 1422 aa38.86■■■■□ 3.81
FOCAD-211ENST00000604036 ABCA8O94911 1581 aa38.84■■■■□ 3.81
FOCAD-211ENST00000604036 MAPKBP1O60336 1514 aa38.81■■■■□ 3.8
FOCAD-211ENST00000604036 KDM5BQ9UGL1 1544 aa38.77■■■■□ 3.8
FOCAD-211ENST00000604036 ARHGAP35Q9NRY4 1499 aa38.74■■■■□ 3.79
FOCAD-211ENST00000604036 ZCCHC11Q5TAX3 1644 aaKnown RBP38.73■■■■□ 3.79
FOCAD-211ENST00000604036 RAPGEF6Q8TEU7 1601 aa38.69■■■■□ 3.78
FOCAD-211ENST00000604036 KIF13AQ9H1H9 1805 aa38.66■■■■□ 3.78
FOCAD-211ENST00000604036 ASXL2Q76L83 1435 aa38.66■■■■□ 3.78
FOCAD-211ENST00000604036 ABCC10Q5T3U5 1492 aa38.64■■■■□ 3.78
FOCAD-211ENST00000604036 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
FOCAD-211ENST00000604036 ARID3CA6NKF2 412 aa38.62■■■■□ 3.77
FOCAD-211ENST00000604036 FAM69CQ0P6D2 419 aa38.61■■■■□ 3.77
FOCAD-211ENST00000604036 AEBP2Q6ZN18 517 aaPredicted RBP38.61■■■■□ 3.77
FOCAD-211ENST00000604036 DIP2BQ9P265 1576 aa38.58■■■■□ 3.77
FOCAD-211ENST00000604036 CLIP1P30622 1438 aa38.57■■■■□ 3.77
FOCAD-211ENST00000604036 FMN1Q68DA7 1419 aa38.55■■■■□ 3.76
FOCAD-211ENST00000604036 ATP10BO94823 1461 aa38.54■■■■□ 3.76
FOCAD-211ENST00000604036 NUP153P49790 1475 aaKnown RBP38.52■■■■□ 3.76
FOCAD-211ENST00000604036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.47■■■■□ 3.75
FOCAD-211ENST00000604036 HNRNPUL2Q1KMD3 747 aaKnown RBP38.47■■■■□ 3.75
FOCAD-211ENST00000604036 WDR7Q9Y4E6 1490 aa38.47■■■■□ 3.75
FOCAD-211ENST00000604036 ATP1B4Q9UN42 357 aaPredicted RBP38.45■■■■□ 3.75
FOCAD-211ENST00000604036 CEP162Q5TB80 1403 aa38.42■■■■□ 3.74
FOCAD-211ENST00000604036 EPRSP07814 1512 aaKnown RBP38.42■■■■□ 3.74
FOCAD-211ENST00000604036 GLI2P10070 1586 aa38.39■■■■□ 3.74
FOCAD-211ENST00000604036 KCNH8Q96L42 1107 aa38.38■■■■□ 3.73
FOCAD-211ENST00000604036 HECW1Q76N89 1606 aa38.37■■■■□ 3.73
FOCAD-211ENST00000604036 TSPOAP1O95153 1857 aa38.36■■■■□ 3.73
FOCAD-211ENST00000604036 CDK13Q14004 1512 aaKnown RBP38.3■■■■□ 3.72
FOCAD-211ENST00000604036 PCF11O94913 1555 aaKnown RBP38.27■■■■□ 3.72
FOCAD-211ENST00000604036 PLEKHD1A6NEE1 506 aa38.26■■■■□ 3.72
FOCAD-211ENST00000604036 CASKIN1Q8WXD9 1431 aa38.26■■■■□ 3.72
FOCAD-211ENST00000604036 MAP3K4Q9Y6R4 1608 aa38.23■■■■□ 3.71
FOCAD-211ENST00000604036 LRRIQ1Q96JM4 1722 aa38.21■■■■□ 3.71
FOCAD-211ENST00000604036 FYCO1Q9BQS8 1478 aa38.17■■■■□ 3.7
FOCAD-211ENST00000604036 CFAP43Q8NDM7 1665 aa38.17■■■■□ 3.7
FOCAD-211ENST00000604036 PPRC1Q5VV67 1664 aaKnown RBP38.16■■■■□ 3.7
FOCAD-211ENST00000604036 CD109Q6YHK3 1445 aa38.12■■■■□ 3.69
FOCAD-211ENST00000604036 CDK11AQ9UQ88 783 aaPredicted RBP38.12■■■■□ 3.69
FOCAD-211ENST00000604036 CCDC18Q5T9S5 1454 aa38.1■■■■□ 3.69
FOCAD-211ENST00000604036 ABCA9Q8IUA7 1624 aa38.08■■■■□ 3.69
FOCAD-211ENST00000604036 TEX14Q8IWB6 1497 aa38.04■■■■□ 3.68
FOCAD-211ENST00000604036 MAGI3Q5TCQ9 1506 aa38.01■■■■□ 3.67
FOCAD-211ENST00000604036 TROQ12816 1431 aaPredicted RBP37.97■■■■□ 3.67
FOCAD-211ENST00000604036 KDM6BO15054 1643 aa37.97■■■■□ 3.67
FOCAD-211ENST00000604036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.96■■■■□ 3.67
FOCAD-211ENST00000604036 VPS8Q8N3P4 1428 aa37.94■■■■□ 3.66
FOCAD-211ENST00000604036 TTC37Q6PGP7 1564 aa37.91■■■■□ 3.66
FOCAD-211ENST00000604036 KIF14Q15058 1648 aa37.89■■■■□ 3.66
FOCAD-211ENST00000604036 COL17A1Q9UMD9 1497 aaPredicted RBP37.79■■■■□ 3.64
FOCAD-211ENST00000604036 MTUS2Q5JR59 1369 aa37.76■■■■□ 3.64
FOCAD-211ENST00000604036 MYO5CQ9NQX4 1742 aa37.75■■■■□ 3.63
FOCAD-211ENST00000604036 NEO1Q92859 1461 aa37.75■■■■□ 3.63
FOCAD-211ENST00000604036 PLCH2O75038 1416 aa37.73■■■■□ 3.63
FOCAD-211ENST00000604036 PHLDB1Q86UU1 1377 aa37.73■■■■□ 3.63
FOCAD-211ENST00000604036 FANCAO15360 1455 aa37.71■■■■□ 3.63
FOCAD-211ENST00000604036 TIAM1Q13009 1591 aa37.69■■■■□ 3.62
FOCAD-211ENST00000604036 CFAP74Q9C0B2 1584 aa37.68■■■■□ 3.62
FOCAD-211ENST00000604036 ARAP3Q8WWN8 1544 aa37.68■■■■□ 3.62
FOCAD-211ENST00000604036 AKNAQ7Z591 1439 aa37.65■■■■□ 3.62
FOCAD-211ENST00000604036 EHBP1L1Q8N3D4 1523 aa37.65■■■■□ 3.62
FOCAD-211ENST00000604036 EFCAB2Q5VUJ9 269 aa37.63■■■■□ 3.61
FOCAD-211ENST00000604036 CDC42BPBQ9Y5S2 1711 aa37.6■■■■□ 3.61
FOCAD-211ENST00000604036 ARHGAP5Q13017 1502 aa37.6■■■■□ 3.61
FOCAD-211ENST00000604036 CDC42BPAQ5VT25 1732 aa37.58■■■■□ 3.61
FOCAD-211ENST00000604036 PREX2Q70Z35 1606 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms