RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CUL7Q14999 1698 aa28.23■■■□□ 2.11
TUBE1-206ENST00000603722 JPH4Q96JJ6 628 aa28.22■■■□□ 2.11
TUBE1-206ENST00000603722 CARMIL1Q5VZK9 1371 aa28.16■■■□□ 2.1
TUBE1-206ENST00000603722 KIAA0586Q9BVV6 1533 aa28.13■■■□□ 2.09
TUBE1-206ENST00000603722 RAPGEF2Q9Y4G8 1499 aa27.94■■■□□ 2.06
TUBE1-206ENST00000603722 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
TUBE1-206ENST00000603722 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
TUBE1-206ENST00000603722 TTBK1Q5TCY1 1321 aaPredicted RBP27.83■■■□□ 2.05
TUBE1-206ENST00000603722 PTPRGP23470 1445 aa27.83■■■□□ 2.05
TUBE1-206ENST00000603722 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
TUBE1-206ENST00000603722 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
TUBE1-206ENST00000603722 TNIKQ9UKE5 1360 aa27.81■■■□□ 2.04
TUBE1-206ENST00000603722 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
TUBE1-206ENST00000603722 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
TUBE1-206ENST00000603722 UGGT2Q9NYU1 1516 aa27.73■■■□□ 2.03
TUBE1-206ENST00000603722 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
TUBE1-206ENST00000603722 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
TUBE1-206ENST00000603722 FAM69CQ0P6D2 419 aa27.67■■■□□ 2.02
TUBE1-206ENST00000603722 KIAA0556O60303 1618 aa27.64■■■□□ 2.02
TUBE1-206ENST00000603722 ABCC2Q92887 1545 aa27.63■■■□□ 2.01
TUBE1-206ENST00000603722 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
TUBE1-206ENST00000603722 DIP2BQ9P265 1576 aa27.62■■■□□ 2.01
TUBE1-206ENST00000603722 UACAQ9BZF9 1416 aa27.62■■■□□ 2.01
TUBE1-206ENST00000603722 UHRF1BP1LA0JNW5 1464 aa27.6■■■□□ 2.01
TUBE1-206ENST00000603722 CTTNBP2Q8WZ74 1663 aa27.59■■■□□ 2.01
TUBE1-206ENST00000603722 CSRNP3Q8WYN3 585 aa27.59■■■□□ 2.01
TUBE1-206ENST00000603722 GOLGA3Q08378 1498 aa27.54■■■□□ 2
TUBE1-206ENST00000603722 EEA1Q15075 1411 aa27.53■■■□□ 2
TUBE1-206ENST00000603722 ASXL2Q76L83 1435 aa27.51■■□□□ 1.99
TUBE1-206ENST00000603722 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
TUBE1-206ENST00000603722 KDM5BQ9UGL1 1544 aa27.47■■□□□ 1.99
TUBE1-206ENST00000603722 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
TUBE1-206ENST00000603722 ZCCHC11Q5TAX3 1644 aaKnown RBP27.39■■□□□ 1.98
TUBE1-206ENST00000603722 ABCA8O94911 1581 aa27.37■■□□□ 1.97
TUBE1-206ENST00000603722 P3H3Q8IVL6 736 aa27.37■■□□□ 1.97
TUBE1-206ENST00000603722 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
TUBE1-206ENST00000603722 GLI2P10070 1586 aa27.35■■□□□ 1.97
TUBE1-206ENST00000603722 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
TUBE1-206ENST00000603722 WDR7Q9Y4E6 1490 aa27.3■■□□□ 1.96
TUBE1-206ENST00000603722 SAMD9Q5K651 1589 aa27.29■■□□□ 1.96
TUBE1-206ENST00000603722 KDM6BO15054 1643 aa27.29■■□□□ 1.96
TUBE1-206ENST00000603722 TSPOAP1O95153 1857 aa27.29■■□□□ 1.96
TUBE1-206ENST00000603722 RANGAP1P46060 587 aaPredicted RBP27.28■■□□□ 1.96
TUBE1-206ENST00000603722 KIF21BO75037 1637 aa27.26■■□□□ 1.95
TUBE1-206ENST00000603722 ARID3CA6NKF2 412 aa27.23■■□□□ 1.95
TUBE1-206ENST00000603722 PPRC1Q5VV67 1664 aaKnown RBP27.21■■□□□ 1.95
TUBE1-206ENST00000603722 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
TUBE1-206ENST00000603722 MAP3K4Q9Y6R4 1608 aa27.2■■□□□ 1.95
TUBE1-206ENST00000603722 FHOD3Q2V2M9 1422 aa27.19■■□□□ 1.94
TUBE1-206ENST00000603722 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
TUBE1-206ENST00000603722 KCNH8Q96L42 1107 aa27.16■■□□□ 1.94
TUBE1-206ENST00000603722 ATP10BO94823 1461 aa27.15■■□□□ 1.94
TUBE1-206ENST00000603722 TEX14Q8IWB6 1497 aa27.15■■□□□ 1.94
TUBE1-206ENST00000603722 RAPGEF6Q8TEU7 1601 aa27.12■■□□□ 1.93
TUBE1-206ENST00000603722 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
TUBE1-206ENST00000603722 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
TUBE1-206ENST00000603722 UBTFP17480 764 aaKnown RBP27.09■■□□□ 1.93
TUBE1-206ENST00000603722 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
TUBE1-206ENST00000603722 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
TUBE1-206ENST00000603722 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
TUBE1-206ENST00000603722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
TUBE1-206ENST00000603722 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
TUBE1-206ENST00000603722 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
TUBE1-206ENST00000603722 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
TUBE1-206ENST00000603722 ABCA9Q8IUA7 1624 aa26.9■■□□□ 1.9
TUBE1-206ENST00000603722 KDM4FA0A1W2PPD8 638 aa26.9■■□□□ 1.9
TUBE1-206ENST00000603722 PLEKHD1A6NEE1 506 aa26.87■■□□□ 1.89
TUBE1-206ENST00000603722 FMN1Q68DA7 1419 aa26.87■■□□□ 1.89
TUBE1-206ENST00000603722 CDK13Q14004 1512 aaKnown RBP26.85■■□□□ 1.89
TUBE1-206ENST00000603722 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
TUBE1-206ENST00000603722 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
TUBE1-206ENST00000603722 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
TUBE1-206ENST00000603722 ADGRL1O94910 1474 aa26.78■■□□□ 1.88
TUBE1-206ENST00000603722 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
TUBE1-206ENST00000603722 NEO1Q92859 1461 aa26.77■■□□□ 1.88
TUBE1-206ENST00000603722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.74■■□□□ 1.87
TUBE1-206ENST00000603722 RAPGEF3O95398 923 aa26.71■■□□□ 1.87
TUBE1-206ENST00000603722 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
TUBE1-206ENST00000603722 FANCAO15360 1455 aa26.67■■□□□ 1.86
TUBE1-206ENST00000603722 CDK11AQ9UQ88 783 aaPredicted RBP26.65■■□□□ 1.86
TUBE1-206ENST00000603722 AKNAQ7Z591 1439 aa26.64■■□□□ 1.85
TUBE1-206ENST00000603722 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
TUBE1-206ENST00000603722 CLIP1P30622 1438 aa26.62■■□□□ 1.85
TUBE1-206ENST00000603722 PCF11O94913 1555 aaKnown RBP26.62■■□□□ 1.85
TUBE1-206ENST00000603722 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
TUBE1-206ENST00000603722 CFAP74Q9C0B2 1584 aa26.6■■□□□ 1.85
TUBE1-206ENST00000603722 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
TUBE1-206ENST00000603722 DENND4BO75064 1496 aaPredicted RBP26.6■■□□□ 1.85
TUBE1-206ENST00000603722 PLCH2O75038 1416 aa26.57■■□□□ 1.84
TUBE1-206ENST00000603722 KIF14Q15058 1648 aa26.56■■□□□ 1.84
TUBE1-206ENST00000603722 CCDC18Q5T9S5 1454 aa26.55■■□□□ 1.84
TUBE1-206ENST00000603722 FYCO1Q9BQS8 1478 aa26.53■■□□□ 1.84
TUBE1-206ENST00000603722 LRRIQ1Q96JM4 1722 aa26.53■■□□□ 1.84
TUBE1-206ENST00000603722 ARHGEF40Q8TER5 1519 aa26.49■■□□□ 1.83
TUBE1-206ENST00000603722 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
TUBE1-206ENST00000603722 RICTORQ6R327 1708 aa26.48■■□□□ 1.83
TUBE1-206ENST00000603722 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
TUBE1-206ENST00000603722 POGZQ7Z3K3 1410 aa26.47■■□□□ 1.83
TUBE1-206ENST00000603722 ZMYM4Q5VZL5 1548 aa26.45■■□□□ 1.83
TUBE1-206ENST00000603722 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms