RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 RUSC2Q8N2Y8 1516 aa36.85■■■■□ 3.49
PPFIA3-209ENST00000602783 CUL7Q14999 1698 aa36.76■■■■□ 3.47
PPFIA3-209ENST00000602783 KIAA0586Q9BVV6 1533 aa36.74■■■■□ 3.47
PPFIA3-209ENST00000602783 CARMIL1Q5VZK9 1371 aa36.69■■■■□ 3.46
PPFIA3-209ENST00000602783 NPM1P06748 294 aaKnown RBP eCLIP36.61■■■■□ 3.45
PPFIA3-209ENST00000602783 KIF13AQ9H1H9 1805 aa36.49■■■■□ 3.43
PPFIA3-209ENST00000602783 ADCY10Q96PN6 1610 aa36.48■■■■□ 3.43
PPFIA3-209ENST00000602783 FAM69CQ0P6D2 419 aa36.46■■■■□ 3.43
PPFIA3-209ENST00000602783 TTBK1Q5TCY1 1321 aaPredicted RBP36.44■■■■□ 3.42
PPFIA3-209ENST00000602783 PTPRGP23470 1445 aa36.43■■■■□ 3.42
PPFIA3-209ENST00000602783 MAPKBP1O60336 1514 aa36.41■■■■□ 3.42
PPFIA3-209ENST00000602783 ABCC10Q5T3U5 1492 aa36.41■■■■□ 3.42
PPFIA3-209ENST00000602783 CARMIL2Q6F5E8 1435 aa36.4■■■■□ 3.42
PPFIA3-209ENST00000602783 IQGAP2Q13576 1575 aa36.36■■■■□ 3.41
PPFIA3-209ENST00000602783 TNIKQ9UKE5 1360 aa36.36■■■■□ 3.41
PPFIA3-209ENST00000602783 AEBP2Q6ZN18 517 aaPredicted RBP36.34■■■■□ 3.41
PPFIA3-209ENST00000602783 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
PPFIA3-209ENST00000602783 DIP2BQ9P265 1576 aa36.27■■■■□ 3.4
PPFIA3-209ENST00000602783 DISP1Q96F81 1524 aa36.21■■■■□ 3.39
PPFIA3-209ENST00000602783 ABCC2Q92887 1545 aa36.17■■■■□ 3.38
PPFIA3-209ENST00000602783 UGGT2Q9NYU1 1516 aa36.14■■■■□ 3.38
PPFIA3-209ENST00000602783 UACAQ9BZF9 1416 aa36.13■■■■□ 3.37
PPFIA3-209ENST00000602783 UHRF1BP1LA0JNW5 1464 aa36.11■■■■□ 3.37
PPFIA3-209ENST00000602783 ASXL2Q76L83 1435 aa36.07■■■■□ 3.36
PPFIA3-209ENST00000602783 TSPOAP1O95153 1857 aa36.06■■■■□ 3.36
PPFIA3-209ENST00000602783 PLB1Q6P1J6 1458 aa36.04■■■■□ 3.36
PPFIA3-209ENST00000602783 KIAA0556O60303 1618 aa36.03■■■■□ 3.36
PPFIA3-209ENST00000602783 PRXQ9BXM0 1461 aa35.97■■■■□ 3.35
PPFIA3-209ENST00000602783 KDM6BO15054 1643 aa35.96■■■■□ 3.35
PPFIA3-209ENST00000602783 CTTNBP2Q8WZ74 1663 aa35.95■■■■□ 3.35
PPFIA3-209ENST00000602783 KDM5BQ9UGL1 1544 aa35.94■■■■□ 3.34
PPFIA3-209ENST00000602783 GLI2P10070 1586 aa35.9■■■■□ 3.34
PPFIA3-209ENST00000602783 GOLGA3Q08378 1498 aa35.88■■■■□ 3.33
PPFIA3-209ENST00000602783 ZCCHC11Q5TAX3 1644 aaKnown RBP35.84■■■■□ 3.33
PPFIA3-209ENST00000602783 EPRSP07814 1512 aaKnown RBP35.83■■■■□ 3.33
PPFIA3-209ENST00000602783 CSRNP3Q8WYN3 585 aa35.8■■■■□ 3.32
PPFIA3-209ENST00000602783 PPRC1Q5VV67 1664 aaKnown RBP35.78■■■■□ 3.32
PPFIA3-209ENST00000602783 ABCA8O94911 1581 aa35.7■■■■□ 3.31
PPFIA3-209ENST00000602783 P3H3Q8IVL6 736 aa35.7■■■■□ 3.31
PPFIA3-209ENST00000602783 WDR7Q9Y4E6 1490 aa35.7■■■■□ 3.31
PPFIA3-209ENST00000602783 MAP3K4Q9Y6R4 1608 aa35.69■■■■□ 3.3
PPFIA3-209ENST00000602783 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
PPFIA3-209ENST00000602783 KDM4FA0A1W2PPD8 638 aa35.65■■■■□ 3.3
PPFIA3-209ENST00000602783 KCNH8Q96L42 1107 aa35.64■■■■□ 3.3
PPFIA3-209ENST00000602783 TEX14Q8IWB6 1497 aa35.63■■■■□ 3.29
PPFIA3-209ENST00000602783 COL17A1Q9UMD9 1497 aaPredicted RBP35.6■■■■□ 3.29
PPFIA3-209ENST00000602783 EEA1Q15075 1411 aa35.57■■■■□ 3.29
PPFIA3-209ENST00000602783 ARID3CA6NKF2 412 aa35.56■■■■□ 3.28
PPFIA3-209ENST00000602783 CD109Q6YHK3 1445 aa35.52■■■■□ 3.28
PPFIA3-209ENST00000602783 RANGAP1P46060 587 aaPredicted RBP35.48■■■■□ 3.27
PPFIA3-209ENST00000602783 SAMD9Q5K651 1589 aa35.47■■■■□ 3.27
PPFIA3-209ENST00000602783 ATP10BO94823 1461 aa35.46■■■■□ 3.27
PPFIA3-209ENST00000602783 CFAP43Q8NDM7 1665 aa35.44■■■■□ 3.26
PPFIA3-209ENST00000602783 MAGI3Q5TCQ9 1506 aa35.44■■■■□ 3.26
PPFIA3-209ENST00000602783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.35■■■■□ 3.25
PPFIA3-209ENST00000602783 HNRNPUL2Q1KMD3 747 aaKnown RBP35.35■■■■□ 3.25
PPFIA3-209ENST00000602783 KIF21BO75037 1637 aa35.35■■■■□ 3.25
PPFIA3-209ENST00000602783 RAPGEF6Q8TEU7 1601 aa35.34■■■■□ 3.25
PPFIA3-209ENST00000602783 ADGRL1O94910 1474 aa35.33■■■■□ 3.25
PPFIA3-209ENST00000602783 FHOD3Q2V2M9 1422 aa35.31■■■■□ 3.24
PPFIA3-209ENST00000602783 CHIC1Q5VXU3 224 aa35.27■■■■□ 3.24
PPFIA3-209ENST00000602783 NUP153P49790 1475 aaKnown RBP35.23■■■■□ 3.23
PPFIA3-209ENST00000602783 EHMT2Q96KQ7 1210 aa35.2■■■■□ 3.23
PPFIA3-209ENST00000602783 ABCA9Q8IUA7 1624 aa35.2■■■■□ 3.23
PPFIA3-209ENST00000602783 ARAP3Q8WWN8 1544 aa35.16■■■■□ 3.22
PPFIA3-209ENST00000602783 UBTFP17480 764 aaKnown RBP35.14■■■■□ 3.22
PPFIA3-209ENST00000602783 EFCAB5A4FU69 1503 aa35.13■■■■□ 3.21
PPFIA3-209ENST00000602783 PLEKHD1A6NEE1 506 aa35.13■■■■□ 3.21
PPFIA3-209ENST00000602783 PHLDB1Q86UU1 1377 aa35.13■■■■□ 3.21
PPFIA3-209ENST00000602783 RAPGEF3O95398 923 aa35.05■■■■□ 3.2
PPFIA3-209ENST00000602783 NEO1Q92859 1461 aa35.04■■■■□ 3.2
PPFIA3-209ENST00000602783 ATP1B4Q9UN42 357 aaPredicted RBP34.94■■■■□ 3.18
PPFIA3-209ENST00000602783 CDK13Q14004 1512 aaKnown RBP34.91■■■■□ 3.18
PPFIA3-209ENST00000602783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.89■■■■□ 3.18
PPFIA3-209ENST00000602783 ARHGAP35Q9NRY4 1499 aa34.88■■■■□ 3.17
PPFIA3-209ENST00000602783 FMN1Q68DA7 1419 aa34.88■■■■□ 3.17
PPFIA3-209ENST00000602783 AKNAQ7Z591 1439 aa34.86■■■■□ 3.17
PPFIA3-209ENST00000602783 FANCAO15360 1455 aa34.84■■■■□ 3.17
PPFIA3-209ENST00000602783 FRMPD1Q5SYB0 1578 aa34.83■■■■□ 3.17
PPFIA3-209ENST00000602783 DENND4BO75064 1496 aaPredicted RBP34.83■■■■□ 3.17
PPFIA3-209ENST00000602783 TTC37Q6PGP7 1564 aa34.81■■■■□ 3.16
PPFIA3-209ENST00000602783 HECW2Q9P2P5 1572 aa34.79■■■■□ 3.16
PPFIA3-209ENST00000602783 ARID4BQ4LE39 1312 aaPredicted RBP34.79■■■■□ 3.16
PPFIA3-209ENST00000602783 HECW1Q76N89 1606 aa34.77■■■■□ 3.16
PPFIA3-209ENST00000602783 CDK11AQ9UQ88 783 aaPredicted RBP34.76■■■■□ 3.16
PPFIA3-209ENST00000602783 CFAP74Q9C0B2 1584 aa34.75■■■■□ 3.15
PPFIA3-209ENST00000602783 RICTORQ6R327 1708 aa34.71■■■■□ 3.15
PPFIA3-209ENST00000602783 PLCH2O75038 1416 aa34.71■■■■□ 3.15
PPFIA3-209ENST00000602783 ADAMTSL3P82987 1691 aa34.7■■■■□ 3.14
PPFIA3-209ENST00000602783 PTPRMP28827 1452 aa34.65■■■■□ 3.14
PPFIA3-209ENST00000602783 ARHGEF40Q8TER5 1519 aa34.65■■■■□ 3.14
PPFIA3-209ENST00000602783 SCAPERQ9BY12 1400 aa34.64■■■■□ 3.14
PPFIA3-209ENST00000602783 EFCAB2Q5VUJ9 269 aa34.63■■■■□ 3.13
PPFIA3-209ENST00000602783 BCORL1Q5H9F3 1711 aa34.63■■■■□ 3.13
PPFIA3-209ENST00000602783 TROQ12816 1431 aaPredicted RBP34.6■■■■□ 3.13
PPFIA3-209ENST00000602783 ZMYM4Q5VZL5 1548 aa34.59■■■■□ 3.13
PPFIA3-209ENST00000602783 YEATS2Q9ULM3 1422 aa34.57■■■■□ 3.13
PPFIA3-209ENST00000602783 KIF14Q15058 1648 aa34.56■■■■□ 3.12
PPFIA3-209ENST00000602783 LRRIQ1Q96JM4 1722 aa34.56■■■■□ 3.12
PPFIA3-209ENST00000602783 CLIP1P30622 1438 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms