RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 ARHGEF11O15085 1522 aa36.43■■■■□ 3.42
UBE2E3-207ENST00000602499 FAM9AQ8IZU1 332 aaPredicted RBP36.42■■■■□ 3.42
UBE2E3-207ENST00000602499 KIAA0586Q9BVV6 1533 aa36.34■■■■□ 3.41
UBE2E3-207ENST00000602499 KIF21BO75037 1637 aa36.26■■■■□ 3.39
UBE2E3-207ENST00000602499 SHROOM2Q13796 1616 aa36.24■■■■□ 3.39
UBE2E3-207ENST00000602499 JPH4Q96JJ6 628 aa36.22■■■■□ 3.39
UBE2E3-207ENST00000602499 IQGAP2Q13576 1575 aa36.15■■■■□ 3.38
UBE2E3-207ENST00000602499 CTTNBP2Q8WZ74 1663 aa36.12■■■■□ 3.37
UBE2E3-207ENST00000602499 ARAP1Q96P48 1450 aa36.09■■■■□ 3.37
UBE2E3-207ENST00000602499 CYB5RLQ6IPT4 315 aa36.08■■■■□ 3.37
UBE2E3-207ENST00000602499 PRG4Q92954 1404 aaPredicted RBP36.08■■■■□ 3.37
UBE2E3-207ENST00000602499 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
UBE2E3-207ENST00000602499 UGGT2Q9NYU1 1516 aa36.01■■■■□ 3.36
UBE2E3-207ENST00000602499 ERCC6L2Q5T890 1561 aa35.99■■■■□ 3.35
UBE2E3-207ENST00000602499 CARMIL2Q6F5E8 1435 aa35.94■■■■□ 3.34
UBE2E3-207ENST00000602499 UBTFP17480 764 aaKnown RBP35.92■■■■□ 3.34
UBE2E3-207ENST00000602499 DISP1Q96F81 1524 aa35.88■■■■□ 3.33
UBE2E3-207ENST00000602499 EHMT2Q96KQ7 1210 aa35.83■■■■□ 3.33
UBE2E3-207ENST00000602499 TNIKQ9UKE5 1360 aa35.79■■■■□ 3.32
UBE2E3-207ENST00000602499 KIAA0556O60303 1618 aa35.79■■■■□ 3.32
UBE2E3-207ENST00000602499 TRHP20396 242 aaPredicted RBP35.74■■■■□ 3.31
UBE2E3-207ENST00000602499 PTPRGP23470 1445 aa35.72■■■■□ 3.31
UBE2E3-207ENST00000602499 SAMD9Q5K651 1589 aa35.72■■■■□ 3.31
UBE2E3-207ENST00000602499 EFCAB5A4FU69 1503 aa35.66■■■■□ 3.3
UBE2E3-207ENST00000602499 RANGAP1P46060 587 aaPredicted RBP35.59■■■■□ 3.29
UBE2E3-207ENST00000602499 LOC105371045A0A1W2PR82 267 aa35.55■■■■□ 3.28
UBE2E3-207ENST00000602499 P3H3Q8IVL6 736 aa35.54■■■■□ 3.28
UBE2E3-207ENST00000602499 TTBK1Q5TCY1 1321 aaPredicted RBP35.51■■■■□ 3.27
UBE2E3-207ENST00000602499 ARHGAP35Q9NRY4 1499 aa35.5■■■■□ 3.27
UBE2E3-207ENST00000602499 UACAQ9BZF9 1416 aa35.49■■■■□ 3.27
UBE2E3-207ENST00000602499 UHRF1BP1LA0JNW5 1464 aa35.48■■■■□ 3.27
UBE2E3-207ENST00000602499 FHOD3Q2V2M9 1422 aa35.46■■■■□ 3.27
UBE2E3-207ENST00000602499 ADCY10Q96PN6 1610 aa35.46■■■■□ 3.27
UBE2E3-207ENST00000602499 CLIP1P30622 1438 aa35.41■■■■□ 3.26
UBE2E3-207ENST00000602499 ABCC2Q92887 1545 aa35.41■■■■□ 3.26
UBE2E3-207ENST00000602499 ABCA8O94911 1581 aa35.4■■■■□ 3.26
UBE2E3-207ENST00000602499 PLB1Q6P1J6 1458 aa35.39■■■■□ 3.26
UBE2E3-207ENST00000602499 NPM1P06748 294 aaKnown RBP eCLIP35.36■■■■□ 3.25
UBE2E3-207ENST00000602499 CEP162Q5TB80 1403 aa35.35■■■■□ 3.25
UBE2E3-207ENST00000602499 FMN1Q68DA7 1419 aa35.33■■■■□ 3.25
UBE2E3-207ENST00000602499 KDM5BQ9UGL1 1544 aa35.28■■■■□ 3.24
UBE2E3-207ENST00000602499 RAPGEF6Q8TEU7 1601 aa35.27■■■■□ 3.24
UBE2E3-207ENST00000602499 MAPKBP1O60336 1514 aa35.22■■■■□ 3.23
UBE2E3-207ENST00000602499 ZCCHC11Q5TAX3 1644 aaKnown RBP35.16■■■■□ 3.22
UBE2E3-207ENST00000602499 NUP153P49790 1475 aaKnown RBP35.16■■■■□ 3.22
UBE2E3-207ENST00000602499 ATP10BO94823 1461 aa35.12■■■■□ 3.21
UBE2E3-207ENST00000602499 CASKIN1Q8WXD9 1431 aa35.09■■■■□ 3.21
UBE2E3-207ENST00000602499 HECW1Q76N89 1606 aa35.07■■■■□ 3.21
UBE2E3-207ENST00000602499 ASXL2Q76L83 1435 aa35.06■■■■□ 3.2
UBE2E3-207ENST00000602499 FYCO1Q9BQS8 1478 aa35.02■■■■□ 3.2
UBE2E3-207ENST00000602499 PCF11O94913 1555 aaKnown RBP35■■■■□ 3.19
UBE2E3-207ENST00000602499 ABCC10Q5T3U5 1492 aa34.99■■■■□ 3.19
UBE2E3-207ENST00000602499 EPRSP07814 1512 aaKnown RBP34.98■■■■□ 3.19
UBE2E3-207ENST00000602499 ARID3CA6NKF2 412 aa34.98■■■■□ 3.19
UBE2E3-207ENST00000602499 ATP1B4Q9UN42 357 aaPredicted RBP34.97■■■■□ 3.19
UBE2E3-207ENST00000602499 WDR7Q9Y4E6 1490 aa34.96■■■■□ 3.19
UBE2E3-207ENST00000602499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
UBE2E3-207ENST00000602499 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
UBE2E3-207ENST00000602499 AEBP2Q6ZN18 517 aaPredicted RBP34.94■■■■□ 3.18
UBE2E3-207ENST00000602499 VPS8Q8N3P4 1428 aa34.92■■■■□ 3.18
UBE2E3-207ENST00000602499 DIP2BQ9P265 1576 aa34.91■■■■□ 3.18
UBE2E3-207ENST00000602499 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
UBE2E3-207ENST00000602499 CDK13Q14004 1512 aaKnown RBP34.89■■■■□ 3.18
UBE2E3-207ENST00000602499 PLEKHD1A6NEE1 506 aa34.88■■■■□ 3.17
UBE2E3-207ENST00000602499 FAM69CQ0P6D2 419 aa34.87■■■■□ 3.17
UBE2E3-207ENST00000602499 KIF13AQ9H1H9 1805 aa34.87■■■■□ 3.17
UBE2E3-207ENST00000602499 LRRIQ1Q96JM4 1722 aa34.86■■■■□ 3.17
UBE2E3-207ENST00000602499 CDK11AQ9UQ88 783 aaPredicted RBP34.86■■■■□ 3.17
UBE2E3-207ENST00000602499 GLI2P10070 1586 aa34.86■■■■□ 3.17
UBE2E3-207ENST00000602499 KCNH8Q96L42 1107 aa34.77■■■■□ 3.16
UBE2E3-207ENST00000602499 TROQ12816 1431 aaPredicted RBP34.7■■■■□ 3.15
UBE2E3-207ENST00000602499 MAP3K4Q9Y6R4 1608 aa34.66■■■■□ 3.14
UBE2E3-207ENST00000602499 CFAP43Q8NDM7 1665 aa34.65■■■■□ 3.14
UBE2E3-207ENST00000602499 ABCA9Q8IUA7 1624 aa34.65■■■■□ 3.14
UBE2E3-207ENST00000602499 MAP3K1Q13233 1512 aa34.65■■■■□ 3.14
UBE2E3-207ENST00000602499 MAGI3Q5TCQ9 1506 aa34.6■■■■□ 3.13
UBE2E3-207ENST00000602499 CD109Q6YHK3 1445 aa34.6■■■■□ 3.13
UBE2E3-207ENST00000602499 TIAM1Q13009 1591 aa34.59■■■■□ 3.13
UBE2E3-207ENST00000602499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.56■■■■□ 3.12
UBE2E3-207ENST00000602499 KIF14Q15058 1648 aa34.56■■■■□ 3.12
UBE2E3-207ENST00000602499 MTUS2Q5JR59 1369 aa34.55■■■■□ 3.12
UBE2E3-207ENST00000602499 TSPOAP1O95153 1857 aa34.53■■■■□ 3.12
UBE2E3-207ENST00000602499 APLP2Q06481 763 aa34.52■■■■□ 3.12
UBE2E3-207ENST00000602499 PPRC1Q5VV67 1664 aaKnown RBP34.51■■■■□ 3.12
UBE2E3-207ENST00000602499 TEX14Q8IWB6 1497 aa34.51■■■■□ 3.11
UBE2E3-207ENST00000602499 EHBP1L1Q8N3D4 1523 aa34.5■■■■□ 3.11
UBE2E3-207ENST00000602499 TTC37Q6PGP7 1564 aa34.48■■■■□ 3.11
UBE2E3-207ENST00000602499 LRRC9Q6ZRR7 1453 aa34.46■■■■□ 3.11
UBE2E3-207ENST00000602499 PLCH2O75038 1416 aa34.42■■■■□ 3.1
UBE2E3-207ENST00000602499 ARAP3Q8WWN8 1544 aa34.4■■■■□ 3.1
UBE2E3-207ENST00000602499 PHLDB1Q86UU1 1377 aa34.38■■■■□ 3.09
UBE2E3-207ENST00000602499 KANK4Q5T7N3 995 aaPredicted RBP34.37■■■■□ 3.09
UBE2E3-207ENST00000602499 MYO5CQ9NQX4 1742 aa34.37■■■■□ 3.09
UBE2E3-207ENST00000602499 NEO1Q92859 1461 aa34.35■■■■□ 3.09
UBE2E3-207ENST00000602499 SUPT6HQ7KZ85 1726 aaKnown RBP34.34■■■■□ 3.09
UBE2E3-207ENST00000602499 FANCAO15360 1455 aa34.31■■■■□ 3.08
UBE2E3-207ENST00000602499 CFAP74Q9C0B2 1584 aa34.3■■■■□ 3.08
UBE2E3-207ENST00000602499 NCOA2Q15596 1464 aa34.29■■■■□ 3.08
UBE2E3-207ENST00000602499 GPATCH8Q9UKJ3 1502 aaKnown RBP34.29■■■■□ 3.08
UBE2E3-207ENST00000602499 CCNB3Q8WWL7 1395 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms