RNA–Protein interactions for RNA: ENST00000602149.1

ZNF549-204, Transcript of zinc finger protein 549, humanhuman

TSL 1 (best) BASIC

Gene ZNF549, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-204ENST00000602149 ZNF326Q5BKZ1 582 aaKnown RBP10.04□□□□□ -0.8
ZNF549-204ENST00000602149 SYNJ1O43426 1573 aa10.04□□□□□ -0.8
ZNF549-204ENST00000602149 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.8
ZNF549-204ENST00000602149 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.81
ZNF549-204ENST00000602149 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
ZNF549-204ENST00000602149 KANK4Q5T7N3 995 aaPredicted RBP10□□□□□ -0.81
ZNF549-204ENST00000602149 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
ZNF549-204ENST00000602149 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
ZNF549-204ENST00000602149 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
ZNF549-204ENST00000602149 CANXP27824 592 aaKnown RBP9.98□□□□□ -0.81
ZNF549-204ENST00000602149 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
ZNF549-204ENST00000602149 RAD54L2Q9Y4B4 1467 aa9.97□□□□□ -0.81
ZNF549-204ENST00000602149 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
ZNF549-204ENST00000602149 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
ZNF549-204ENST00000602149 NPM2Q86SE8 214 aaKnown RBP9.97□□□□□ -0.81
ZNF549-204ENST00000602149 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
ZNF549-204ENST00000602149 CFTRP13569 1480 aa9.96□□□□□ -0.82
ZNF549-204ENST00000602149 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
ZNF549-204ENST00000602149 ANP32CO43423 234 aa9.95□□□□□ -0.82
ZNF549-204ENST00000602149 ARID4BQ4LE39 1312 aaPredicted RBP9.94□□□□□ -0.82
ZNF549-204ENST00000602149 PEG3Q9GZU2 1588 aa9.93□□□□□ -0.82
ZNF549-204ENST00000602149 CUX1P39880 1505 aa9.92□□□□□ -0.82
ZNF549-204ENST00000602149 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
ZNF549-204ENST00000602149 IGF1RP08069 1367 aa9.92□□□□□ -0.82
ZNF549-204ENST00000602149 TONSLQ96HA7 1378 aa9.91□□□□□ -0.82
ZNF549-204ENST00000602149 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
ZNF549-204ENST00000602149 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.82
ZNF549-204ENST00000602149 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
ZNF549-204ENST00000602149 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
ZNF549-204ENST00000602149 KANK1Q14678 1352 aa9.88□□□□□ -0.83
ZNF549-204ENST00000602149 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
ZNF549-204ENST00000602149 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
ZNF549-204ENST00000602149 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
ZNF549-204ENST00000602149 KCNH8Q96L42 1107 aa9.87□□□□□ -0.83
ZNF549-204ENST00000602149 PLPPR3Q6T4P5 718 aa9.85□□□□□ -0.83
ZNF549-204ENST00000602149 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
ZNF549-204ENST00000602149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
ZNF549-204ENST00000602149 FHOD3Q2V2M9 1422 aa9.84□□□□□ -0.83
ZNF549-204ENST00000602149 TOP2BQ02880 1626 aa9.83□□□□□ -0.84
ZNF549-204ENST00000602149 HAP1P54257 671 aaPredicted RBP9.82□□□□□ -0.84
ZNF549-204ENST00000602149 AQRO60306 1485 aaKnown RBP eCLIP9.82□□□□□ -0.84
ZNF549-204ENST00000602149 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
ZNF549-204ENST00000602149 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
ZNF549-204ENST00000602149 HIRIP3Q9BW71 556 aaPredicted RBP9.79□□□□□ -0.84
ZNF549-204ENST00000602149 RRP7BPQ9NSQ0 103 aa9.79□□□□□ -0.84
ZNF549-204ENST00000602149 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
ZNF549-204ENST00000602149 CCNB3Q8WWL7 1395 aa9.79□□□□□ -0.84
ZNF549-204ENST00000602149 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
ZNF549-204ENST00000602149 TOPBP1Q92547 1522 aa9.78□□□□□ -0.84
ZNF549-204ENST00000602149 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
ZNF549-204ENST00000602149 KIF21BO75037 1637 aa9.77□□□□□ -0.85
ZNF549-204ENST00000602149 EIF5BO60841 1220 aaKnown RBP9.77□□□□□ -0.85
ZNF549-204ENST00000602149 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
ZNF549-204ENST00000602149 SIN3AQ96ST3 1273 aa9.75□□□□□ -0.85
ZNF549-204ENST00000602149 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
ZNF549-204ENST00000602149 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
ZNF549-204ENST00000602149 EFCAB2Q5VUJ9 269 aa9.74□□□□□ -0.85
ZNF549-204ENST00000602149 CDK11BP21127 795 aaKnown RBP9.74□□□□□ -0.85
ZNF549-204ENST00000602149 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
ZNF549-204ENST00000602149 ARHGAP35Q9NRY4 1499 aa9.73□□□□□ -0.85
ZNF549-204ENST00000602149 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
ZNF549-204ENST00000602149 CFAP53Q96M91 514 aa9.73□□□□□ -0.85
ZNF549-204ENST00000602149 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
ZNF549-204ENST00000602149 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
ZNF549-204ENST00000602149 ANP32BQ92688 251 aaKnown RBP9.72□□□□□ -0.85
ZNF549-204ENST00000602149 MYH16Q9H6N6 1097 aa9.72□□□□□ -0.85
ZNF549-204ENST00000602149 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.85
ZNF549-204ENST00000602149 A0A0G2JS52 829 aa9.7□□□□□ -0.86
ZNF549-204ENST00000602149 WDR43Q15061 677 aaKnown RBP eCLIP9.7□□□□□ -0.86
ZNF549-204ENST00000602149 PNNQ9H307 717 aaKnown RBP9.69□□□□□ -0.86
ZNF549-204ENST00000602149 ANP32AP39687 249 aaKnown RBP9.69□□□□□ -0.86
ZNF549-204ENST00000602149 JPH4Q96JJ6 628 aa9.68□□□□□ -0.86
ZNF549-204ENST00000602149 POGKQ9P215 609 aa9.67□□□□□ -0.86
ZNF549-204ENST00000602149 HSP90AA1P07900 732 aaKnown RBP9.67□□□□□ -0.86
ZNF549-204ENST00000602149 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
ZNF549-204ENST00000602149 FOXD1Q16676 465 aa9.66□□□□□ -0.86
ZNF549-204ENST00000602149 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
ZNF549-204ENST00000602149 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
ZNF549-204ENST00000602149 CHMP4AQ9BY43 222 aa9.65□□□□□ -0.86
ZNF549-204ENST00000602149 BIVM-ERCC5R4GMW8 1640 aa9.65□□□□□ -0.86
ZNF549-204ENST00000602149 EID1Q9Y6B2 187 aa9.65□□□□□ -0.87
ZNF549-204ENST00000602149 ERICH3Q5RHP9 1530 aa9.64□□□□□ -0.87
ZNF549-204ENST00000602149 MIER1Q8N108 512 aa9.64□□□□□ -0.87
ZNF549-204ENST00000602149 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
ZNF549-204ENST00000602149 AEBP2Q6ZN18 517 aaPredicted RBP9.63□□□□□ -0.87
ZNF549-204ENST00000602149 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
ZNF549-204ENST00000602149 ABCA10Q8WWZ4 1543 aa9.63□□□□□ -0.87
ZNF549-204ENST00000602149 CHMP4BQ9H444 224 aaKnown RBP9.63□□□□□ -0.87
ZNF549-204ENST00000602149 ZNF644Q9H582 1327 aaPredicted RBP9.62□□□□□ -0.87
ZNF549-204ENST00000602149 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
ZNF549-204ENST00000602149 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
ZNF549-204ENST00000602149 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
ZNF549-204ENST00000602149 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
ZNF549-204ENST00000602149 CCDC18Q5T9S5 1454 aa9.61□□□□□ -0.87
ZNF549-204ENST00000602149 NPHP1O15259 732 aa9.6□□□□□ -0.87
ZNF549-204ENST00000602149 SALL2Q9Y467 1007 aaPredicted RBP9.6□□□□□ -0.87
ZNF549-204ENST00000602149 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
ZNF549-204ENST00000602149 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
ZNF549-204ENST00000602149 ANKRD30AQ9BXX3 1397 aa9.59□□□□□ -0.87
ZNF549-204ENST00000602149 FAM9BQ8IZU0 186 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms