RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
DDX49-213ENST00000602113 CLIP1P30622 1438 aa27.96■■■□□ 2.07
DDX49-213ENST00000602113 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
DDX49-213ENST00000602113 CHD1O14646 1710 aa27.89■■■□□ 2.06
DDX49-213ENST00000602113 NUP160Q12769 1436 aa27.89■■■□□ 2.06
DDX49-213ENST00000602113 KIAA0586Q9BVV6 1533 aa27.86■■■□□ 2.05
DDX49-213ENST00000602113 IQGAP2Q13576 1575 aa27.83■■■□□ 2.05
DDX49-213ENST00000602113 ARHGAP35Q9NRY4 1499 aa27.83■■■□□ 2.05
DDX49-213ENST00000602113 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
DDX49-213ENST00000602113 EFCAB5A4FU69 1503 aa27.73■■■□□ 2.03
DDX49-213ENST00000602113 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
DDX49-213ENST00000602113 SAMD9Q5K651 1589 aa27.7■■■□□ 2.03
DDX49-213ENST00000602113 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
DDX49-213ENST00000602113 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
DDX49-213ENST00000602113 FHOD3Q2V2M9 1422 aa27.64■■■□□ 2.02
DDX49-213ENST00000602113 JPH4Q96JJ6 628 aa27.64■■■□□ 2.02
DDX49-213ENST00000602113 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
DDX49-213ENST00000602113 DISP1Q96F81 1524 aa27.61■■■□□ 2.01
DDX49-213ENST00000602113 KIAA0556O60303 1618 aa27.56■■■□□ 2
DDX49-213ENST00000602113 SHROOM2Q13796 1616 aa27.54■■■□□ 2
DDX49-213ENST00000602113 OSCARQ8IYS5 282 aa27.52■■■□□ 2
DDX49-213ENST00000602113 PRG4Q92954 1404 aaPredicted RBP27.51■■□□□ 1.99
DDX49-213ENST00000602113 CARMIL2Q6F5E8 1435 aa27.49■■□□□ 1.99
DDX49-213ENST00000602113 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
DDX49-213ENST00000602113 PCF11O94913 1555 aaKnown RBP27.42■■□□□ 1.98
DDX49-213ENST00000602113 ERCC6L2Q5T890 1561 aa27.4■■□□□ 1.98
DDX49-213ENST00000602113 CASKIN1Q8WXD9 1431 aa27.4■■□□□ 1.98
DDX49-213ENST00000602113 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
DDX49-213ENST00000602113 FYCO1Q9BQS8 1478 aa27.37■■□□□ 1.97
DDX49-213ENST00000602113 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
DDX49-213ENST00000602113 APLP2Q06481 763 aa27.3■■□□□ 1.96
DDX49-213ENST00000602113 ATP1B4Q9UN42 357 aaPredicted RBP27.3■■□□□ 1.96
DDX49-213ENST00000602113 PTPRGP23470 1445 aa27.29■■□□□ 1.96
DDX49-213ENST00000602113 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
DDX49-213ENST00000602113 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
DDX49-213ENST00000602113 RAPGEF6Q8TEU7 1601 aa27.23■■□□□ 1.95
DDX49-213ENST00000602113 TIAM1Q13009 1591 aa27.23■■□□□ 1.95
DDX49-213ENST00000602113 HECW1Q76N89 1606 aa27.23■■□□□ 1.95
DDX49-213ENST00000602113 ABCA8O94911 1581 aa27.21■■□□□ 1.95
DDX49-213ENST00000602113 LRRIQ1Q96JM4 1722 aa27.21■■□□□ 1.95
DDX49-213ENST00000602113 KANK4Q5T7N3 995 aaPredicted RBP27.21■■□□□ 1.95
DDX49-213ENST00000602113 NUP153P49790 1475 aaKnown RBP27.19■■□□□ 1.94
DDX49-213ENST00000602113 CFAP43Q8NDM7 1665 aa27.19■■□□□ 1.94
DDX49-213ENST00000602113 EPRSP07814 1512 aaKnown RBP27.16■■□□□ 1.94
DDX49-213ENST00000602113 CCDC18Q5T9S5 1454 aa27.14■■□□□ 1.94
DDX49-213ENST00000602113 ARID3CA6NKF2 412 aa27.13■■□□□ 1.93
DDX49-213ENST00000602113 UACAQ9BZF9 1416 aa27.13■■□□□ 1.93
DDX49-213ENST00000602113 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
DDX49-213ENST00000602113 LRRC9Q6ZRR7 1453 aa27.11■■□□□ 1.93
DDX49-213ENST00000602113 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
DDX49-213ENST00000602113 ABCC2Q92887 1545 aa27.05■■□□□ 1.92
DDX49-213ENST00000602113 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
DDX49-213ENST00000602113 UHRF1BP1LA0JNW5 1464 aa27.02■■□□□ 1.92
DDX49-213ENST00000602113 ATP10BO94823 1461 aa27.02■■□□□ 1.92
DDX49-213ENST00000602113 MTUS2Q5JR59 1369 aa27■■□□□ 1.91
DDX49-213ENST00000602113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.98■■□□□ 1.91
DDX49-213ENST00000602113 HNRNPUL2Q1KMD3 747 aaKnown RBP26.98■■□□□ 1.91
DDX49-213ENST00000602113 TRIM26Q12899 539 aaPredicted RBP26.98■■□□□ 1.91
DDX49-213ENST00000602113 RIMBP3CA6NJZ7 1639 aa26.97■■□□□ 1.91
DDX49-213ENST00000602113 RIMBP3BA6NNM3 1639 aa26.97■■□□□ 1.91
DDX49-213ENST00000602113 RIMBP3Q9UFD9 1639 aa26.97■■□□□ 1.91
DDX49-213ENST00000602113 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
DDX49-213ENST00000602113 ADCY10Q96PN6 1610 aa26.95■■□□□ 1.9
DDX49-213ENST00000602113 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
DDX49-213ENST00000602113 KDM5BQ9UGL1 1544 aa26.91■■□□□ 1.9
DDX49-213ENST00000602113 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
DDX49-213ENST00000602113 ZCCHC11Q5TAX3 1644 aaKnown RBP26.86■■□□□ 1.89
DDX49-213ENST00000602113 PHLDB1Q86UU1 1377 aa26.86■■□□□ 1.89
DDX49-213ENST00000602113 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
DDX49-213ENST00000602113 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
DDX49-213ENST00000602113 SUPT6HQ7KZ85 1726 aaKnown RBP26.85■■□□□ 1.89
DDX49-213ENST00000602113 PLEKHD1A6NEE1 506 aa26.85■■□□□ 1.89
DDX49-213ENST00000602113 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
DDX49-213ENST00000602113 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
DDX49-213ENST00000602113 KIF14Q15058 1648 aa26.76■■□□□ 1.87
DDX49-213ENST00000602113 MYOM3Q5VTT5 1437 aa26.72■■□□□ 1.87
DDX49-213ENST00000602113 CCNB3Q8WWL7 1395 aa26.7■■□□□ 1.87
DDX49-213ENST00000602113 NPM1P06748 294 aaKnown RBP eCLIP26.7■■□□□ 1.86
DDX49-213ENST00000602113 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
DDX49-213ENST00000602113 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
DDX49-213ENST00000602113 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
DDX49-213ENST00000602113 WDR7Q9Y4E6 1490 aa26.66■■□□□ 1.86
DDX49-213ENST00000602113 KCNH8Q96L42 1107 aa26.64■■□□□ 1.86
DDX49-213ENST00000602113 GPATCH8Q9UKJ3 1502 aaKnown RBP26.62■■□□□ 1.85
DDX49-213ENST00000602113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.6■■□□□ 1.85
DDX49-213ENST00000602113 MIA2Q96PC5 1412 aa26.6■■□□□ 1.85
DDX49-213ENST00000602113 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
DDX49-213ENST00000602113 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
DDX49-213ENST00000602113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
DDX49-213ENST00000602113 PTPN23Q9H3S7 1636 aa26.56■■□□□ 1.84
DDX49-213ENST00000602113 CDC42BPAQ5VT25 1732 aa26.55■■□□□ 1.84
DDX49-213ENST00000602113 ITSN2Q9NZM3 1697 aa26.55■■□□□ 1.84
DDX49-213ENST00000602113 TCOF1Q13428 1488 aaKnown RBP26.54■■□□□ 1.84
DDX49-213ENST00000602113 MAPKBP1O60336 1514 aa26.54■■□□□ 1.84
DDX49-213ENST00000602113 CFDP1Q9UEE9 299 aaPredicted RBP26.53■■□□□ 1.84
DDX49-213ENST00000602113 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
DDX49-213ENST00000602113 ZNF644Q9H582 1327 aaPredicted RBP26.49■■□□□ 1.83
DDX49-213ENST00000602113 PREX2Q70Z35 1606 aa26.48■■□□□ 1.83
DDX49-213ENST00000602113 ITGAEP38570 1179 aa26.47■■□□□ 1.83
DDX49-213ENST00000602113 ABCA9Q8IUA7 1624 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms