RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
SMG9-212ENST00000601925 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
SMG9-212ENST00000601925 CUL7Q14999 1698 aa22.75■■□□□ 1.23
SMG9-212ENST00000601925 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
SMG9-212ENST00000601925 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
SMG9-212ENST00000601925 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
SMG9-212ENST00000601925 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
SMG9-212ENST00000601925 ILDR1Q86SU0 546 aaPredicted RBP22.65■■□□□ 1.22
SMG9-212ENST00000601925 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
SMG9-212ENST00000601925 MAPKBP1O60336 1514 aa22.58■■□□□ 1.21
SMG9-212ENST00000601925 NPM1P06748 294 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMG9-212ENST00000601925 ABCC10Q5T3U5 1492 aa22.57■■□□□ 1.2
SMG9-212ENST00000601925 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
SMG9-212ENST00000601925 PTPRGP23470 1445 aa22.52■■□□□ 1.2
SMG9-212ENST00000601925 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
SMG9-212ENST00000601925 DIP2BQ9P265 1576 aa22.5■■□□□ 1.19
SMG9-212ENST00000601925 TNIKQ9UKE5 1360 aa22.49■■□□□ 1.19
SMG9-212ENST00000601925 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
SMG9-212ENST00000601925 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
SMG9-212ENST00000601925 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
SMG9-212ENST00000601925 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
SMG9-212ENST00000601925 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
SMG9-212ENST00000601925 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
SMG9-212ENST00000601925 UHRF1BP1LA0JNW5 1464 aa22.38■■□□□ 1.17
SMG9-212ENST00000601925 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
SMG9-212ENST00000601925 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
SMG9-212ENST00000601925 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
SMG9-212ENST00000601925 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
SMG9-212ENST00000601925 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
SMG9-212ENST00000601925 KDM5BQ9UGL1 1544 aa22.29■■□□□ 1.16
SMG9-212ENST00000601925 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
SMG9-212ENST00000601925 GLI2P10070 1586 aa22.27■■□□□ 1.16
SMG9-212ENST00000601925 KDM6BO15054 1643 aa22.27■■□□□ 1.16
SMG9-212ENST00000601925 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
SMG9-212ENST00000601925 PPRC1Q5VV67 1664 aaKnown RBP22.23■■□□□ 1.15
SMG9-212ENST00000601925 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.15
SMG9-212ENST00000601925 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
SMG9-212ENST00000601925 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
SMG9-212ENST00000601925 EEA1Q15075 1411 aa22.17■■□□□ 1.14
SMG9-212ENST00000601925 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
SMG9-212ENST00000601925 MAP3K4Q9Y6R4 1608 aa22.14■■□□□ 1.14
SMG9-212ENST00000601925 ABCA8O94911 1581 aa22.13■■□□□ 1.13
SMG9-212ENST00000601925 COL17A1Q9UMD9 1497 aaPredicted RBP22.11■■□□□ 1.13
SMG9-212ENST00000601925 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
SMG9-212ENST00000601925 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
SMG9-212ENST00000601925 WDR7Q9Y4E6 1490 aa22.09■■□□□ 1.13
SMG9-212ENST00000601925 TEX14Q8IWB6 1497 aa22.04■■□□□ 1.12
SMG9-212ENST00000601925 P3H3Q8IVL6 736 aa22■■□□□ 1.11
SMG9-212ENST00000601925 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
SMG9-212ENST00000601925 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
SMG9-212ENST00000601925 CD109Q6YHK3 1445 aa21.97■■□□□ 1.11
SMG9-212ENST00000601925 ATP10BO94823 1461 aa21.96■■□□□ 1.11
SMG9-212ENST00000601925 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SMG9-212ENST00000601925 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
SMG9-212ENST00000601925 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
SMG9-212ENST00000601925 ADGRL1O94910 1474 aa21.89■■□□□ 1.09
SMG9-212ENST00000601925 RAPGEF6Q8TEU7 1601 aa21.87■■□□□ 1.09
SMG9-212ENST00000601925 KIF21BO75037 1637 aa21.85■■□□□ 1.09
SMG9-212ENST00000601925 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.08
SMG9-212ENST00000601925 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
SMG9-212ENST00000601925 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
SMG9-212ENST00000601925 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
SMG9-212ENST00000601925 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
SMG9-212ENST00000601925 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
SMG9-212ENST00000601925 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
SMG9-212ENST00000601925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
SMG9-212ENST00000601925 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
SMG9-212ENST00000601925 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
SMG9-212ENST00000601925 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
SMG9-212ENST00000601925 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
SMG9-212ENST00000601925 NEO1Q92859 1461 aa21.7■■□□□ 1.06
SMG9-212ENST00000601925 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
SMG9-212ENST00000601925 RAPGEF3O95398 923 aa21.67■■□□□ 1.06
SMG9-212ENST00000601925 FRMPD1Q5SYB0 1578 aa21.62■■□□□ 1.05
SMG9-212ENST00000601925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.05
SMG9-212ENST00000601925 CDK13Q14004 1512 aaKnown RBP21.59■■□□□ 1.05
SMG9-212ENST00000601925 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.05
SMG9-212ENST00000601925 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
SMG9-212ENST00000601925 TTC37Q6PGP7 1564 aa21.57■■□□□ 1.04
SMG9-212ENST00000601925 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
SMG9-212ENST00000601925 FANCAO15360 1455 aa21.55■■□□□ 1.04
SMG9-212ENST00000601925 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
SMG9-212ENST00000601925 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
SMG9-212ENST00000601925 DENND4BO75064 1496 aaPredicted RBP21.53■■□□□ 1.04
SMG9-212ENST00000601925 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
SMG9-212ENST00000601925 CFAP74Q9C0B2 1584 aa21.5■■□□□ 1.03
SMG9-212ENST00000601925 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
SMG9-212ENST00000601925 HECW1Q76N89 1606 aa21.48■■□□□ 1.03
SMG9-212ENST00000601925 ARHGEF40Q8TER5 1519 aa21.48■■□□□ 1.03
SMG9-212ENST00000601925 PLCH2O75038 1416 aa21.47■■□□□ 1.03
SMG9-212ENST00000601925 PTPRMP28827 1452 aa21.47■■□□□ 1.03
SMG9-212ENST00000601925 BCORL1Q5H9F3 1711 aa21.47■■□□□ 1.03
SMG9-212ENST00000601925 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
SMG9-212ENST00000601925 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
SMG9-212ENST00000601925 CLIP1P30622 1438 aa21.44■■□□□ 1.02
SMG9-212ENST00000601925 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
SMG9-212ENST00000601925 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
SMG9-212ENST00000601925 LRRIQ1Q96JM4 1722 aa21.42■■□□□ 1.02
SMG9-212ENST00000601925 MADDQ8WXG6 1647 aa21.41■■□□□ 1.02
SMG9-212ENST00000601925 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms