RNA–Protein interactions for RNA: ENST00000601668.5

PNPLA6-223, Transcript of patatin like phospholipase domain containing 6, human

TSL 3

Gene PNPLA6, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPLA6-223	ENST00000601668	KIAA0586	Q9BVV6	1533 aa		34.05	■■■■□ 3.04
PNPLA6-223	ENST00000601668	RAPGEF2	Q9Y4G8	1499 aa		34.01	■■■■□ 3.03
PNPLA6-223	ENST00000601668	JPH4	Q96JJ6	628 aa		34	■■■■□ 3.03
PNPLA6-223	ENST00000601668	PRG4	Q92954	1404 aa	Predicted RBP	33.98	■■■■□ 3.03
PNPLA6-223	ENST00000601668	PRX	Q9BXM0	1461 aa		33.93	■■■■□ 3.02
PNPLA6-223	ENST00000601668	CHIC1	Q5VXU3	224 aa		33.92	■■■■□ 3.02
PNPLA6-223	ENST00000601668	IQGAP2	Q13576	1575 aa		33.87	■■■■□ 3.01
PNPLA6-223	ENST00000601668	CTTNBP2	Q8WZ74	1663 aa		33.79	■■■■□ 3
PNPLA6-223	ENST00000601668	EEA1	Q15075	1411 aa		33.79	■■■■□ 3
PNPLA6-223	ENST00000601668	CSRNP3	Q8WYN3	585 aa		33.75	■■■□□ 2.99
PNPLA6-223	ENST00000601668	UGGT2	Q9NYU1	1516 aa		33.7	■■■□□ 2.99
PNPLA6-223	ENST00000601668	DISP1	Q96F81	1524 aa		33.69	■■■□□ 2.98
PNPLA6-223	ENST00000601668	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.61	■■■□□ 2.97
PNPLA6-223	ENST00000601668	CARMIL2	Q6F5E8	1435 aa		33.6	■■■□□ 2.97
PNPLA6-223	ENST00000601668	KIAA0556	O60303	1618 aa		33.59	■■■□□ 2.97
PNPLA6-223	ENST00000601668	ADCY10	Q96PN6	1610 aa		33.59	■■■□□ 2.97
PNPLA6-223	ENST00000601668	KIF21B	O75037	1637 aa		33.55	■■■□□ 2.96
PNPLA6-223	ENST00000601668	TNIK	Q9UKE5	1360 aa		33.55	■■■□□ 2.96
PNPLA6-223	ENST00000601668	PTPRG	P23470	1445 aa		33.53	■■■□□ 2.96
PNPLA6-223	ENST00000601668	TRH	P20396	242 aa	Predicted RBP	33.41	■■■□□ 2.94
PNPLA6-223	ENST00000601668	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.4	■■■□□ 2.94
PNPLA6-223	ENST00000601668	GOLGA3	Q08378	1498 aa		33.39	■■■□□ 2.94
PNPLA6-223	ENST00000601668	SAMD9	Q5K651	1589 aa		33.35	■■■□□ 2.93
PNPLA6-223	ENST00000601668	UHRF1BP1L	A0JNW5	1464 aa		33.35	■■■□□ 2.93
PNPLA6-223	ENST00000601668	MAPKBP1	O60336	1514 aa		33.33	■■■□□ 2.93
PNPLA6-223	ENST00000601668	UACA	Q9BZF9	1416 aa		33.33	■■■□□ 2.93
PNPLA6-223	ENST00000601668	ABCC2	Q92887	1545 aa		33.32	■■■□□ 2.92
PNPLA6-223	ENST00000601668	KIF13A	Q9H1H9	1805 aa		33.31	■■■□□ 2.92
PNPLA6-223	ENST00000601668	ABCA8	O94911	1581 aa		33.24	■■■□□ 2.91
PNPLA6-223	ENST00000601668	PLB1	Q6P1J6	1458 aa		33.24	■■■□□ 2.91
PNPLA6-223	ENST00000601668	NPM1	P06748	294 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
PNPLA6-223	ENST00000601668	KDM5B	Q9UGL1	1544 aa		33.2	■■■□□ 2.91
PNPLA6-223	ENST00000601668	DIP2B	Q9P265	1576 aa		33.18	■■■□□ 2.9
PNPLA6-223	ENST00000601668	P3H3	Q8IVL6	736 aa		33.18	■■■□□ 2.9
PNPLA6-223	ENST00000601668	EHMT2	Q96KQ7	1210 aa		33.18	■■■□□ 2.9
PNPLA6-223	ENST00000601668	ABCC10	Q5T3U5	1492 aa		33.18	■■■□□ 2.9
PNPLA6-223	ENST00000601668	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.17	■■■□□ 2.9
PNPLA6-223	ENST00000601668	RANGAP1	P46060	587 aa	Predicted RBP	33.1	■■■□□ 2.89
PNPLA6-223	ENST00000601668	EFCAB5	A4FU69	1503 aa		33.1	■■■□□ 2.89
PNPLA6-223	ENST00000601668	ASXL2	Q76L83	1435 aa		33.1	■■■□□ 2.89
PNPLA6-223	ENST00000601668	FHOD3	Q2V2M9	1422 aa		33.09	■■■□□ 2.89
PNPLA6-223	ENST00000601668	UBTF	P17480	764 aa	Known RBP	33.08	■■■□□ 2.89
PNPLA6-223	ENST00000601668	FAM69C	Q0P6D2	419 aa		33.02	■■■□□ 2.88
PNPLA6-223	ENST00000601668	RAPGEF6	Q8TEU7	1601 aa		33.02	■■■□□ 2.88
PNPLA6-223	ENST00000601668	ARHGAP35	Q9NRY4	1499 aa		32.97	■■■□□ 2.87
PNPLA6-223	ENST00000601668	GLI2	P10070	1586 aa		32.95	■■■□□ 2.86
PNPLA6-223	ENST00000601668	ATP10B	O94823	1461 aa		32.93	■■■□□ 2.86
PNPLA6-223	ENST00000601668	EPRS	P07814	1512 aa	Known RBP	32.92	■■■□□ 2.86
PNPLA6-223	ENST00000601668	WDR7	Q9Y4E6	1490 aa		32.91	■■■□□ 2.86
PNPLA6-223	ENST00000601668	TSPOAP1	O95153	1857 aa		32.91	■■■□□ 2.86
PNPLA6-223	ENST00000601668	NUP153	P49790	1475 aa	Known RBP	32.9	■■■□□ 2.86
PNPLA6-223	ENST00000601668	PPRC1	Q5VV67	1664 aa	Known RBP	32.87	■■■□□ 2.85
PNPLA6-223	ENST00000601668	ARID3C	A6NKF2	412 aa		32.84	■■■□□ 2.85
PNPLA6-223	ENST00000601668	MAP3K4	Q9Y6R4	1608 aa		32.84	■■■□□ 2.85
PNPLA6-223	ENST00000601668	FMN1	Q68DA7	1419 aa		32.73	■■■□□ 2.83
PNPLA6-223	ENST00000601668	CFAP43	Q8NDM7	1665 aa		32.69	■■■□□ 2.82
PNPLA6-223	ENST00000601668	CDK13	Q14004	1512 aa	Known RBP	32.67	■■■□□ 2.82
PNPLA6-223	ENST00000601668	HECW1	Q76N89	1606 aa		32.66	■■■□□ 2.82
PNPLA6-223	ENST00000601668	LRRIQ1	Q96JM4	1722 aa		32.66	■■■□□ 2.82
PNPLA6-223	ENST00000601668	CLIP1	P30622	1438 aa		32.66	■■■□□ 2.82
PNPLA6-223	ENST00000601668	KCNH8	Q96L42	1107 aa		32.65	■■■□□ 2.82
PNPLA6-223	ENST00000601668	KDM6B	O15054	1643 aa		32.62	■■■□□ 2.81
PNPLA6-223	ENST00000601668	ABCA9	Q8IUA7	1624 aa		32.61	■■■□□ 2.81
PNPLA6-223	ENST00000601668	PCF11	O94913	1555 aa	Known RBP	32.61	■■■□□ 2.81
PNPLA6-223	ENST00000601668	CD109	Q6YHK3	1445 aa		32.58	■■■□□ 2.81
PNPLA6-223	ENST00000601668	MAGI3	Q5TCQ9	1506 aa		32.57	■■■□□ 2.8
PNPLA6-223	ENST00000601668	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.57	■■■□□ 2.8
PNPLA6-223	ENST00000601668	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.57	■■■□□ 2.8
PNPLA6-223	ENST00000601668	TEX14	Q8IWB6	1497 aa		32.54	■■■□□ 2.8
PNPLA6-223	ENST00000601668	LOC105371045	A0A1W2PR82	267 aa		32.53	■■■□□ 2.8
PNPLA6-223	ENST00000601668	CASKIN1	Q8WXD9	1431 aa		32.52	■■■□□ 2.8
PNPLA6-223	ENST00000601668	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.52	■■■□□ 2.8
PNPLA6-223	ENST00000601668	CEP162	Q5TB80	1403 aa		32.51	■■■□□ 2.8
PNPLA6-223	ENST00000601668	PLEKHD1	A6NEE1	506 aa		32.47	■■■□□ 2.79
PNPLA6-223	ENST00000601668	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.47	■■■□□ 2.79
PNPLA6-223	ENST00000601668	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.45	■■■□□ 2.78
PNPLA6-223	ENST00000601668	FYCO1	Q9BQS8	1478 aa		32.44	■■■□□ 2.78
PNPLA6-223	ENST00000601668	TTC37	Q6PGP7	1564 aa		32.44	■■■□□ 2.78
PNPLA6-223	ENST00000601668	CCDC18	Q5T9S5	1454 aa		32.37	■■■□□ 2.77
PNPLA6-223	ENST00000601668	KIF14	Q15058	1648 aa		32.37	■■■□□ 2.77
PNPLA6-223	ENST00000601668	TRO	Q12816	1431 aa	Predicted RBP	32.34	■■■□□ 2.77
PNPLA6-223	ENST00000601668	ARAP3	Q8WWN8	1544 aa		32.3	■■■□□ 2.76
PNPLA6-223	ENST00000601668	NEO1	Q92859	1461 aa		32.29	■■■□□ 2.76
PNPLA6-223	ENST00000601668	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.27	■■■□□ 2.76
PNPLA6-223	ENST00000601668	MYO5C	Q9NQX4	1742 aa		32.23	■■■□□ 2.75
PNPLA6-223	ENST00000601668	PHLDB1	Q86UU1	1377 aa		32.21	■■■□□ 2.75
PNPLA6-223	ENST00000601668	FRMPD1	Q5SYB0	1578 aa		32.19	■■■□□ 2.74
PNPLA6-223	ENST00000601668	PLCH2	O75038	1416 aa		32.19	■■■□□ 2.74
PNPLA6-223	ENST00000601668	FANCA	O15360	1455 aa		32.19	■■■□□ 2.74
PNPLA6-223	ENST00000601668	CFAP74	Q9C0B2	1584 aa		32.19	■■■□□ 2.74
PNPLA6-223	ENST00000601668	AKNA	Q7Z591	1439 aa		32.14	■■■□□ 2.74
PNPLA6-223	ENST00000601668	VPS8	Q8N3P4	1428 aa		32.13	■■■□□ 2.73
PNPLA6-223	ENST00000601668	CDC42BPB	Q9Y5S2	1711 aa		32.13	■■■□□ 2.73
PNPLA6-223	ENST00000601668	RICTOR	Q6R327	1708 aa		32.12	■■■□□ 2.73
PNPLA6-223	ENST00000601668	CDC42BPA	Q5VT25	1732 aa		32.09	■■■□□ 2.73
PNPLA6-223	ENST00000601668	PREX2	Q70Z35	1606 aa		32.09	■■■□□ 2.73
PNPLA6-223	ENST00000601668	RAPGEF3	O95398	923 aa		32.07	■■■□□ 2.72
PNPLA6-223	ENST00000601668	DENND4B	O75064	1496 aa	Predicted RBP	32.03	■■■□□ 2.72
PNPLA6-223	ENST00000601668	ARHGAP5	Q13017	1502 aa		32.02	■■■□□ 2.72
PNPLA6-223	ENST00000601668	ADGRL1	O94910	1474 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms