RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 SHROOM2Q13796 1616 aa36.01■■■■□ 3.36
SNRPA-211ENST00000601545 CUL7Q14999 1698 aa35.97■■■■□ 3.35
SNRPA-211ENST00000601545 RUSC2Q8N2Y8 1516 aa35.91■■■■□ 3.34
SNRPA-211ENST00000601545 KIAA0586Q9BVV6 1533 aa35.91■■■■□ 3.34
SNRPA-211ENST00000601545 RAPGEF2Q9Y4G8 1499 aa35.71■■■■□ 3.31
SNRPA-211ENST00000601545 TTBK1Q5TCY1 1321 aaPredicted RBP35.7■■■■□ 3.31
SNRPA-211ENST00000601545 NPM1P06748 294 aaKnown RBP eCLIP35.64■■■■□ 3.3
SNRPA-211ENST00000601545 CARMIL2Q6F5E8 1435 aa35.58■■■■□ 3.29
SNRPA-211ENST00000601545 PTPRGP23470 1445 aa35.57■■■■□ 3.29
SNRPA-211ENST00000601545 IQGAP2Q13576 1575 aa35.56■■■■□ 3.28
SNRPA-211ENST00000601545 TNIKQ9UKE5 1360 aa35.51■■■■□ 3.28
SNRPA-211ENST00000601545 CSRNP3Q8WYN3 585 aa35.46■■■■□ 3.27
SNRPA-211ENST00000601545 PRXQ9BXM0 1461 aa35.44■■■■□ 3.26
SNRPA-211ENST00000601545 ADCY10Q96PN6 1610 aa35.42■■■■□ 3.26
SNRPA-211ENST00000601545 DISP1Q96F81 1524 aa35.4■■■■□ 3.26
SNRPA-211ENST00000601545 FAM69CQ0P6D2 419 aa35.38■■■■□ 3.25
SNRPA-211ENST00000601545 UGGT2Q9NYU1 1516 aa35.37■■■■□ 3.25
SNRPA-211ENST00000601545 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
SNRPA-211ENST00000601545 MAPKBP1O60336 1514 aa35.27■■■■□ 3.24
SNRPA-211ENST00000601545 UACAQ9BZF9 1416 aa35.26■■■■□ 3.24
SNRPA-211ENST00000601545 ABCC10Q5T3U5 1492 aa35.26■■■■□ 3.23
SNRPA-211ENST00000601545 CHIC1Q5VXU3 224 aa35.25■■■■□ 3.23
SNRPA-211ENST00000601545 KIAA0556O60303 1618 aa35.22■■■■□ 3.23
SNRPA-211ENST00000601545 EEA1Q15075 1411 aa35.22■■■■□ 3.23
SNRPA-211ENST00000601545 CTTNBP2Q8WZ74 1663 aa35.21■■■■□ 3.23
SNRPA-211ENST00000601545 ABCC2Q92887 1545 aa35.21■■■■□ 3.23
SNRPA-211ENST00000601545 KIF13AQ9H1H9 1805 aa35.2■■■■□ 3.23
SNRPA-211ENST00000601545 UHRF1BP1LA0JNW5 1464 aa35.18■■■■□ 3.22
SNRPA-211ENST00000601545 GOLGA3Q08378 1498 aa35.17■■■■□ 3.22
SNRPA-211ENST00000601545 P3H3Q8IVL6 736 aa35.16■■■■□ 3.22
SNRPA-211ENST00000601545 DIP2BQ9P265 1576 aa35.1■■■■□ 3.21
SNRPA-211ENST00000601545 ASXL2Q76L83 1435 aa35.09■■■■□ 3.21
SNRPA-211ENST00000601545 RANGAP1P46060 587 aaPredicted RBP35.08■■■■□ 3.21
SNRPA-211ENST00000601545 PLB1Q6P1J6 1458 aa35.04■■■■□ 3.2
SNRPA-211ENST00000601545 KDM5BQ9UGL1 1544 aa35.02■■■■□ 3.2
SNRPA-211ENST00000601545 EHMT2Q96KQ7 1210 aa35.01■■■■□ 3.2
SNRPA-211ENST00000601545 ARID3CA6NKF2 412 aa34.91■■■■□ 3.18
SNRPA-211ENST00000601545 ZCCHC11Q5TAX3 1644 aaKnown RBP34.91■■■■□ 3.18
SNRPA-211ENST00000601545 ABCA8O94911 1581 aa34.89■■■■□ 3.18
SNRPA-211ENST00000601545 TSPOAP1O95153 1857 aa34.88■■■■□ 3.17
SNRPA-211ENST00000601545 UBTFP17480 764 aaKnown RBP34.86■■■■□ 3.17
SNRPA-211ENST00000601545 KCNH8Q96L42 1107 aa34.85■■■■□ 3.17
SNRPA-211ENST00000601545 EPRSP07814 1512 aaKnown RBP34.85■■■■□ 3.17
SNRPA-211ENST00000601545 GLI2P10070 1586 aa34.83■■■■□ 3.17
SNRPA-211ENST00000601545 KIF21BO75037 1637 aa34.82■■■■□ 3.16
SNRPA-211ENST00000601545 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
SNRPA-211ENST00000601545 WDR7Q9Y4E6 1490 aa34.78■■■■□ 3.16
SNRPA-211ENST00000601545 FHOD3Q2V2M9 1422 aa34.73■■■■□ 3.15
SNRPA-211ENST00000601545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.73■■■■□ 3.15
SNRPA-211ENST00000601545 HNRNPUL2Q1KMD3 747 aaKnown RBP34.73■■■■□ 3.15
SNRPA-211ENST00000601545 AEBP2Q6ZN18 517 aaPredicted RBP34.73■■■■□ 3.15
SNRPA-211ENST00000601545 KDM6BO15054 1643 aa34.71■■■■□ 3.15
SNRPA-211ENST00000601545 ATP10BO94823 1461 aa34.71■■■■□ 3.15
SNRPA-211ENST00000601545 PPRC1Q5VV67 1664 aaKnown RBP34.63■■■■□ 3.13
SNRPA-211ENST00000601545 MAP3K4Q9Y6R4 1608 aa34.62■■■■□ 3.13
SNRPA-211ENST00000601545 CD109Q6YHK3 1445 aa34.61■■■■□ 3.13
SNRPA-211ENST00000601545 RAPGEF6Q8TEU7 1601 aa34.6■■■■□ 3.13
SNRPA-211ENST00000601545 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
SNRPA-211ENST00000601545 EFCAB5A4FU69 1503 aa34.56■■■■□ 3.12
SNRPA-211ENST00000601545 NUP153P49790 1475 aaKnown RBP34.53■■■■□ 3.12
SNRPA-211ENST00000601545 COL17A1Q9UMD9 1497 aaPredicted RBP34.52■■■■□ 3.12
SNRPA-211ENST00000601545 ATP1B4Q9UN42 357 aaPredicted RBP34.5■■■■□ 3.11
SNRPA-211ENST00000601545 PLEKHD1A6NEE1 506 aa34.48■■■■□ 3.11
SNRPA-211ENST00000601545 MAGI3Q5TCQ9 1506 aa34.45■■■■□ 3.11
SNRPA-211ENST00000601545 CFAP43Q8NDM7 1665 aa34.43■■■■□ 3.1
SNRPA-211ENST00000601545 ARHGAP35Q9NRY4 1499 aa34.42■■■■□ 3.1
SNRPA-211ENST00000601545 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
SNRPA-211ENST00000601545 KDM4FA0A1W2PPD8 638 aa34.33■■■■□ 3.09
SNRPA-211ENST00000601545 ABCA9Q8IUA7 1624 aa34.29■■■■□ 3.08
SNRPA-211ENST00000601545 CDK13Q14004 1512 aaKnown RBP34.26■■■■□ 3.08
SNRPA-211ENST00000601545 CDK11AQ9UQ88 783 aaPredicted RBP34.2■■■■□ 3.07
SNRPA-211ENST00000601545 PHLDB1Q86UU1 1377 aa34.2■■■■□ 3.07
SNRPA-211ENST00000601545 ARAP3Q8WWN8 1544 aa34.18■■■■□ 3.06
SNRPA-211ENST00000601545 RAPGEF3O95398 923 aa34.17■■■■□ 3.06
SNRPA-211ENST00000601545 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
SNRPA-211ENST00000601545 NEO1Q92859 1461 aa34.13■■■■□ 3.05
SNRPA-211ENST00000601545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.11■■■■□ 3.05
SNRPA-211ENST00000601545 CLIP1P30622 1438 aa34.1■■■■□ 3.05
SNRPA-211ENST00000601545 ADGRL1O94910 1474 aa34.06■■■■□ 3.04
SNRPA-211ENST00000601545 AKNAQ7Z591 1439 aa34.04■■■■□ 3.04
SNRPA-211ENST00000601545 CASKIN1Q8WXD9 1431 aa34.04■■■■□ 3.04
SNRPA-211ENST00000601545 FANCAO15360 1455 aa34.02■■■■□ 3.04
SNRPA-211ENST00000601545 TTC37Q6PGP7 1564 aa34.02■■■■□ 3.04
SNRPA-211ENST00000601545 TROQ12816 1431 aaPredicted RBP33.98■■■■□ 3.03
SNRPA-211ENST00000601545 PLCH2O75038 1416 aa33.97■■■■□ 3.03
SNRPA-211ENST00000601545 DENND4BO75064 1496 aaPredicted RBP33.95■■■■□ 3.03
SNRPA-211ENST00000601545 PCF11O94913 1555 aaKnown RBP33.94■■■■□ 3.02
SNRPA-211ENST00000601545 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
SNRPA-211ENST00000601545 LOC105371045A0A1W2PR82 267 aa33.91■■■■□ 3.02
SNRPA-211ENST00000601545 CCDC18Q5T9S5 1454 aa33.9■■■■□ 3.02
SNRPA-211ENST00000601545 LRRIQ1Q96JM4 1722 aa33.9■■■■□ 3.02
SNRPA-211ENST00000601545 KIF14Q15058 1648 aa33.87■■■■□ 3.01
SNRPA-211ENST00000601545 FYCO1Q9BQS8 1478 aa33.86■■■■□ 3.01
SNRPA-211ENST00000601545 SCAPERQ9BY12 1400 aa33.86■■■■□ 3.01
SNRPA-211ENST00000601545 CFAP74Q9C0B2 1584 aa33.85■■■■□ 3.01
SNRPA-211ENST00000601545 FRMPD1Q5SYB0 1578 aa33.85■■■■□ 3.01
SNRPA-211ENST00000601545 ARID4BQ4LE39 1312 aaPredicted RBP33.84■■■■□ 3.01
SNRPA-211ENST00000601545 CEP162Q5TB80 1403 aa33.81■■■■□ 3
SNRPA-211ENST00000601545 ARHGAP5Q13017 1502 aa33.76■■■■□ 3
SNRPA-211ENST00000601545 MYO5CQ9NQX4 1742 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms