RNA–Protein interactions for RNA: ENST00000601522.1

TMEM143-213, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-213ENST00000601522 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
TMEM143-213ENST00000601522 PRG4Q92954 1404 aaPredicted RBP34.91■■■■□ 3.18
TMEM143-213ENST00000601522 RAPGEF2Q9Y4G8 1499 aa34.86■■■■□ 3.17
TMEM143-213ENST00000601522 ERCC6L2Q5T890 1561 aa34.85■■■■□ 3.17
TMEM143-213ENST00000601522 TRHP20396 242 aaPredicted RBP34.7■■■■□ 3.15
TMEM143-213ENST00000601522 CSRNP3Q8WYN3 585 aa34.68■■■■□ 3.14
TMEM143-213ENST00000601522 EEA1Q15075 1411 aa34.66■■■■□ 3.14
TMEM143-213ENST00000601522 CARMIL2Q6F5E8 1435 aa34.65■■■■□ 3.14
TMEM143-213ENST00000601522 IQGAP2Q13576 1575 aa34.65■■■■□ 3.14
TMEM143-213ENST00000601522 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
TMEM143-213ENST00000601522 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
TMEM143-213ENST00000601522 NPM1P06748 294 aaKnown RBP eCLIP34.53■■■■□ 3.12
TMEM143-213ENST00000601522 PTPRGP23470 1445 aa34.52■■■■□ 3.12
TMEM143-213ENST00000601522 TNIKQ9UKE5 1360 aa34.51■■■■□ 3.12
TMEM143-213ENST00000601522 UGGT2Q9NYU1 1516 aa34.46■■■■□ 3.11
TMEM143-213ENST00000601522 FAM9AQ8IZU1 332 aaPredicted RBP34.44■■■■□ 3.1
TMEM143-213ENST00000601522 TTBK1Q5TCY1 1321 aaPredicted RBP34.42■■■■□ 3.1
TMEM143-213ENST00000601522 DISP1Q96F81 1524 aa34.4■■■■□ 3.1
TMEM143-213ENST00000601522 CTTNBP2Q8WZ74 1663 aa34.4■■■■□ 3.1
TMEM143-213ENST00000601522 GOLGA3Q08378 1498 aa34.36■■■■□ 3.09
TMEM143-213ENST00000601522 ADCY10Q96PN6 1610 aa34.3■■■■□ 3.08
TMEM143-213ENST00000601522 KIAA0556O60303 1618 aa34.29■■■■□ 3.08
TMEM143-213ENST00000601522 UACAQ9BZF9 1416 aa34.25■■■■□ 3.07
TMEM143-213ENST00000601522 UHRF1BP1LA0JNW5 1464 aa34.21■■■■□ 3.07
TMEM143-213ENST00000601522 MAPKBP1O60336 1514 aa34.2■■■■□ 3.07
TMEM143-213ENST00000601522 KIF21BO75037 1637 aa34.18■■■■□ 3.06
TMEM143-213ENST00000601522 ABCC2Q92887 1545 aa34.17■■■■□ 3.06
TMEM143-213ENST00000601522 FAM69CQ0P6D2 419 aa34.12■■■■□ 3.05
TMEM143-213ENST00000601522 ABCC10Q5T3U5 1492 aa34.1■■■■□ 3.05
TMEM143-213ENST00000601522 P3H3Q8IVL6 736 aa34.08■■■■□ 3.05
TMEM143-213ENST00000601522 UBTFP17480 764 aaKnown RBP34.07■■■■□ 3.04
TMEM143-213ENST00000601522 PLB1Q6P1J6 1458 aa34.02■■■■□ 3.04
TMEM143-213ENST00000601522 RANGAP1P46060 587 aaPredicted RBP34.02■■■■□ 3.04
TMEM143-213ENST00000601522 KDM5BQ9UGL1 1544 aa34.02■■■■□ 3.04
TMEM143-213ENST00000601522 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
TMEM143-213ENST00000601522 EHMT2Q96KQ7 1210 aa33.98■■■■□ 3.03
TMEM143-213ENST00000601522 SAMD9Q5K651 1589 aa33.98■■■■□ 3.03
TMEM143-213ENST00000601522 KIF13AQ9H1H9 1805 aa33.97■■■■□ 3.03
TMEM143-213ENST00000601522 DIP2BQ9P265 1576 aa33.94■■■■□ 3.02
TMEM143-213ENST00000601522 ABCA8O94911 1581 aa33.94■■■■□ 3.02
TMEM143-213ENST00000601522 ZCCHC11Q5TAX3 1644 aaKnown RBP33.88■■■■□ 3.01
TMEM143-213ENST00000601522 EFCAB5A4FU69 1503 aa33.87■■■■□ 3.01
TMEM143-213ENST00000601522 FHOD3Q2V2M9 1422 aa33.8■■■■□ 3
TMEM143-213ENST00000601522 GLI2P10070 1586 aa33.79■■■■□ 3
TMEM143-213ENST00000601522 WDR7Q9Y4E6 1490 aa33.77■■■■□ 3
TMEM143-213ENST00000601522 EPRSP07814 1512 aaKnown RBP33.76■■■■□ 3
TMEM143-213ENST00000601522 RAPGEF6Q8TEU7 1601 aa33.73■■■□□ 2.99
TMEM143-213ENST00000601522 ATP10BO94823 1461 aa33.71■■■□□ 2.99
TMEM143-213ENST00000601522 ARID3CA6NKF2 412 aa33.71■■■□□ 2.99
TMEM143-213ENST00000601522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.71■■■□□ 2.99
TMEM143-213ENST00000601522 HNRNPUL2Q1KMD3 747 aaKnown RBP33.71■■■□□ 2.99
TMEM143-213ENST00000601522 KCNH8Q96L42 1107 aa33.7■■■□□ 2.99
TMEM143-213ENST00000601522 TSPOAP1O95153 1857 aa33.64■■■□□ 2.98
TMEM143-213ENST00000601522 FMN1Q68DA7 1419 aa33.63■■■□□ 2.97
TMEM143-213ENST00000601522 ARHGAP35Q9NRY4 1499 aa33.62■■■□□ 2.97
TMEM143-213ENST00000601522 NUP153P49790 1475 aaKnown RBP33.6■■■□□ 2.97
TMEM143-213ENST00000601522 TEX14Q8IWB6 1497 aa33.57■■■□□ 2.97
TMEM143-213ENST00000601522 PLEKHD1A6NEE1 506 aa33.57■■■□□ 2.96
TMEM143-213ENST00000601522 MAP3K4Q9Y6R4 1608 aa33.56■■■□□ 2.96
TMEM143-213ENST00000601522 CD109Q6YHK3 1445 aa33.53■■■□□ 2.96
TMEM143-213ENST00000601522 ATP1B4Q9UN42 357 aaPredicted RBP33.52■■■□□ 2.96
TMEM143-213ENST00000601522 KDM6BO15054 1643 aa33.51■■■□□ 2.96
TMEM143-213ENST00000601522 CFAP43Q8NDM7 1665 aa33.47■■■□□ 2.95
TMEM143-213ENST00000601522 PPRC1Q5VV67 1664 aaKnown RBP33.46■■■□□ 2.95
TMEM143-213ENST00000601522 MAGI3Q5TCQ9 1506 aa33.45■■■□□ 2.95
TMEM143-213ENST00000601522 CDK11AQ9UQ88 783 aaPredicted RBP33.43■■■□□ 2.94
TMEM143-213ENST00000601522 CLIP1P30622 1438 aa33.42■■■□□ 2.94
TMEM143-213ENST00000601522 HECW1Q76N89 1606 aa33.39■■■□□ 2.94
TMEM143-213ENST00000601522 ABCA9Q8IUA7 1624 aa33.35■■■□□ 2.93
TMEM143-213ENST00000601522 PHLDB1Q86UU1 1377 aa33.32■■■□□ 2.92
TMEM143-213ENST00000601522 CDK13Q14004 1512 aaKnown RBP33.31■■■□□ 2.92
TMEM143-213ENST00000601522 CASKIN1Q8WXD9 1431 aa33.28■■■□□ 2.92
TMEM143-213ENST00000601522 COL17A1Q9UMD9 1497 aaPredicted RBP33.25■■■□□ 2.91
TMEM143-213ENST00000601522 CCDC18Q5T9S5 1454 aa33.2■■■□□ 2.91
TMEM143-213ENST00000601522 LOC105371045A0A1W2PR82 267 aa33.19■■■□□ 2.9
TMEM143-213ENST00000601522 CEP162Q5TB80 1403 aa33.19■■■□□ 2.9
TMEM143-213ENST00000601522 NEO1Q92859 1461 aa33.18■■■□□ 2.9
TMEM143-213ENST00000601522 FYCO1Q9BQS8 1478 aa33.18■■■□□ 2.9
TMEM143-213ENST00000601522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.17■■■□□ 2.9
TMEM143-213ENST00000601522 ARAP3Q8WWN8 1544 aa33.17■■■□□ 2.9
TMEM143-213ENST00000601522 AEBP2Q6ZN18 517 aaPredicted RBP33.16■■■□□ 2.9
TMEM143-213ENST00000601522 PCF11O94913 1555 aaKnown RBP33.15■■■□□ 2.9
TMEM143-213ENST00000601522 TROQ12816 1431 aaPredicted RBP33.14■■■□□ 2.9
TMEM143-213ENST00000601522 FANCAO15360 1455 aa33.06■■■□□ 2.88
TMEM143-213ENST00000601522 PLCH2O75038 1416 aa33.06■■■□□ 2.88
TMEM143-213ENST00000601522 TTC37Q6PGP7 1564 aa33.04■■■□□ 2.88
TMEM143-213ENST00000601522 AKNAQ7Z591 1439 aa33.03■■■□□ 2.88
TMEM143-213ENST00000601522 KIF14Q15058 1648 aa33.03■■■□□ 2.88
TMEM143-213ENST00000601522 LRRIQ1Q96JM4 1722 aa33.03■■■□□ 2.88
TMEM143-213ENST00000601522 CFAP74Q9C0B2 1584 aa33.03■■■□□ 2.88
TMEM143-213ENST00000601522 EFCAB2Q5VUJ9 269 aa33.02■■■□□ 2.88
TMEM143-213ENST00000601522 RAPGEF3O95398 923 aa33■■■□□ 2.87
TMEM143-213ENST00000601522 DENND4BO75064 1496 aaPredicted RBP32.96■■■□□ 2.87
TMEM143-213ENST00000601522 MYO5CQ9NQX4 1742 aa32.91■■■□□ 2.86
TMEM143-213ENST00000601522 KDM4FA0A1W2PPD8 638 aa32.89■■■□□ 2.86
TMEM143-213ENST00000601522 MTUS2Q5JR59 1369 aa32.88■■■□□ 2.85
TMEM143-213ENST00000601522 ADGRL1O94910 1474 aa32.87■■■□□ 2.85
TMEM143-213ENST00000601522 SCAPERQ9BY12 1400 aa32.86■■■□□ 2.85
TMEM143-213ENST00000601522 ARHGAP5Q13017 1502 aa32.86■■■□□ 2.85
TMEM143-213ENST00000601522 VPS8Q8N3P4 1428 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 306 ms