RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
LINC00649-212ENST00000601471 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
LINC00649-212ENST00000601471 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
LINC00649-212ENST00000601471 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
LINC00649-212ENST00000601471 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
LINC00649-212ENST00000601471 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
LINC00649-212ENST00000601471 EEA1Q15075 1411 aa16.24■□□□□ 0.19
LINC00649-212ENST00000601471 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.19
LINC00649-212ENST00000601471 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
LINC00649-212ENST00000601471 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
LINC00649-212ENST00000601471 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
LINC00649-212ENST00000601471 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
LINC00649-212ENST00000601471 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
LINC00649-212ENST00000601471 KIF21BO75037 1637 aa16.12■□□□□ 0.17
LINC00649-212ENST00000601471 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
LINC00649-212ENST00000601471 ADCY10Q96PN6 1610 aa16.1■□□□□ 0.17
LINC00649-212ENST00000601471 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
LINC00649-212ENST00000601471 PTPRGP23470 1445 aa16.04■□□□□ 0.16
LINC00649-212ENST00000601471 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
LINC00649-212ENST00000601471 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
LINC00649-212ENST00000601471 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
LINC00649-212ENST00000601471 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
LINC00649-212ENST00000601471 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.15
LINC00649-212ENST00000601471 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
LINC00649-212ENST00000601471 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
LINC00649-212ENST00000601471 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
LINC00649-212ENST00000601471 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.14
LINC00649-212ENST00000601471 ABCA8O94911 1581 aa15.95■□□□□ 0.14
LINC00649-212ENST00000601471 KDM5BQ9UGL1 1544 aa15.94■□□□□ 0.14
LINC00649-212ENST00000601471 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
LINC00649-212ENST00000601471 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
LINC00649-212ENST00000601471 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
LINC00649-212ENST00000601471 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
LINC00649-212ENST00000601471 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
LINC00649-212ENST00000601471 ZCCHC11Q5TAX3 1644 aaKnown RBP15.9■□□□□ 0.14
LINC00649-212ENST00000601471 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00649-212ENST00000601471 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
LINC00649-212ENST00000601471 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
LINC00649-212ENST00000601471 GLI2P10070 1586 aa15.83■□□□□ 0.12
LINC00649-212ENST00000601471 RAPGEF6Q8TEU7 1601 aa15.83■□□□□ 0.12
LINC00649-212ENST00000601471 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
LINC00649-212ENST00000601471 ARHGAP35Q9NRY4 1499 aa15.79■□□□□ 0.12
LINC00649-212ENST00000601471 EPRSP07814 1512 aaKnown RBP15.78■□□□□ 0.12
LINC00649-212ENST00000601471 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
LINC00649-212ENST00000601471 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
LINC00649-212ENST00000601471 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
LINC00649-212ENST00000601471 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
LINC00649-212ENST00000601471 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
LINC00649-212ENST00000601471 ATP10BO94823 1461 aa15.76■□□□□ 0.11
LINC00649-212ENST00000601471 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
LINC00649-212ENST00000601471 FAM69CQ0P6D2 419 aa15.75■□□□□ 0.11
LINC00649-212ENST00000601471 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
LINC00649-212ENST00000601471 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
LINC00649-212ENST00000601471 RANGAP1P46060 587 aaPredicted RBP15.69■□□□□ 0.1
LINC00649-212ENST00000601471 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
LINC00649-212ENST00000601471 TSPOAP1O95153 1857 aa15.68■□□□□ 0.1
LINC00649-212ENST00000601471 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
LINC00649-212ENST00000601471 ABCA9Q8IUA7 1624 aa15.66■□□□□ 0.1
LINC00649-212ENST00000601471 MAGI3Q5TCQ9 1506 aa15.64■□□□□ 0.09
LINC00649-212ENST00000601471 CLIP1P30622 1438 aa15.64■□□□□ 0.09
LINC00649-212ENST00000601471 LRRIQ1Q96JM4 1722 aa15.64■□□□□ 0.09
LINC00649-212ENST00000601471 TEX14Q8IWB6 1497 aa15.63■□□□□ 0.09
LINC00649-212ENST00000601471 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
LINC00649-212ENST00000601471 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
LINC00649-212ENST00000601471 KDM6BO15054 1643 aa15.62■□□□□ 0.09
LINC00649-212ENST00000601471 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
LINC00649-212ENST00000601471 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
LINC00649-212ENST00000601471 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
LINC00649-212ENST00000601471 CD109Q6YHK3 1445 aa15.59■□□□□ 0.09
LINC00649-212ENST00000601471 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
LINC00649-212ENST00000601471 CCDC18Q5T9S5 1454 aa15.56■□□□□ 0.08
LINC00649-212ENST00000601471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
LINC00649-212ENST00000601471 COL17A1Q9UMD9 1497 aaPredicted RBP15.55■□□□□ 0.08
LINC00649-212ENST00000601471 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
LINC00649-212ENST00000601471 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
LINC00649-212ENST00000601471 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.08
LINC00649-212ENST00000601471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
LINC00649-212ENST00000601471 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
LINC00649-212ENST00000601471 ARAP3Q8WWN8 1544 aa15.51■□□□□ 0.07
LINC00649-212ENST00000601471 NEO1Q92859 1461 aa15.51■□□□□ 0.07
LINC00649-212ENST00000601471 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
LINC00649-212ENST00000601471 KIF14Q15058 1648 aa15.5■□□□□ 0.07
LINC00649-212ENST00000601471 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
LINC00649-212ENST00000601471 CFAP74Q9C0B2 1584 aa15.48■□□□□ 0.07
LINC00649-212ENST00000601471 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.06
LINC00649-212ENST00000601471 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
LINC00649-212ENST00000601471 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
LINC00649-212ENST00000601471 FRMPD1Q5SYB0 1578 aa15.44■□□□□ 0.06
LINC00649-212ENST00000601471 FANCAO15360 1455 aa15.43■□□□□ 0.06
LINC00649-212ENST00000601471 PLCH2O75038 1416 aa15.43■□□□□ 0.06
LINC00649-212ENST00000601471 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
LINC00649-212ENST00000601471 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
LINC00649-212ENST00000601471 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
LINC00649-212ENST00000601471 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
LINC00649-212ENST00000601471 CDC42BPBQ9Y5S2 1711 aa15.39■□□□□ 0.05
LINC00649-212ENST00000601471 AKNAQ7Z591 1439 aa15.38■□□□□ 0.05
LINC00649-212ENST00000601471 ZMYM4Q5VZL5 1548 aa15.38■□□□□ 0.05
LINC00649-212ENST00000601471 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
LINC00649-212ENST00000601471 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
LINC00649-212ENST00000601471 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms