RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 PRG4Q92954 1404 aaPredicted RBP39.17■■■■□ 3.86
SSBP4-209ENST00000601357 JPH4Q96JJ6 628 aa39.16■■■■□ 3.86
SSBP4-209ENST00000601357 KIAA0586Q9BVV6 1533 aa39.09■■■■□ 3.85
SSBP4-209ENST00000601357 CARMIL1Q5VZK9 1371 aa39.07■■■■□ 3.84
SSBP4-209ENST00000601357 RAPGEF2Q9Y4G8 1499 aa38.79■■■■□ 3.8
SSBP4-209ENST00000601357 IQGAP2Q13576 1575 aa38.78■■■■□ 3.8
SSBP4-209ENST00000601357 ADCY10Q96PN6 1610 aa38.73■■■■□ 3.79
SSBP4-209ENST00000601357 CARMIL2Q6F5E8 1435 aa38.64■■■■□ 3.78
SSBP4-209ENST00000601357 KIF13AQ9H1H9 1805 aa38.63■■■■□ 3.77
SSBP4-209ENST00000601357 MAPKBP1O60336 1514 aa38.61■■■■□ 3.77
SSBP4-209ENST00000601357 PTPRGP23470 1445 aa38.6■■■■□ 3.77
SSBP4-209ENST00000601357 TNIKQ9UKE5 1360 aa38.59■■■■□ 3.77
SSBP4-209ENST00000601357 DISP1Q96F81 1524 aa38.58■■■■□ 3.77
SSBP4-209ENST00000601357 UGGT2Q9NYU1 1516 aa38.58■■■■□ 3.77
SSBP4-209ENST00000601357 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
SSBP4-209ENST00000601357 NPM1P06748 294 aaKnown RBP eCLIP38.54■■■■□ 3.76
SSBP4-209ENST00000601357 CTTNBP2Q8WZ74 1663 aa38.51■■■■□ 3.76
SSBP4-209ENST00000601357 ABCC10Q5T3U5 1492 aa38.48■■■■□ 3.75
SSBP4-209ENST00000601357 KIAA0556O60303 1618 aa38.44■■■■□ 3.74
SSBP4-209ENST00000601357 DIP2BQ9P265 1576 aa38.43■■■■□ 3.74
SSBP4-209ENST00000601357 UHRF1BP1LA0JNW5 1464 aa38.4■■■■□ 3.74
SSBP4-209ENST00000601357 TTBK1Q5TCY1 1321 aaPredicted RBP38.39■■■■□ 3.74
SSBP4-209ENST00000601357 ABCC2Q92887 1545 aa38.39■■■■□ 3.74
SSBP4-209ENST00000601357 FAM69CQ0P6D2 419 aa38.35■■■■□ 3.73
SSBP4-209ENST00000601357 UACAQ9BZF9 1416 aa38.34■■■■□ 3.73
SSBP4-209ENST00000601357 CSRNP3Q8WYN3 585 aa38.26■■■■□ 3.72
SSBP4-209ENST00000601357 GOLGA3Q08378 1498 aa38.26■■■■□ 3.72
SSBP4-209ENST00000601357 EEA1Q15075 1411 aa38.23■■■■□ 3.71
SSBP4-209ENST00000601357 KDM5BQ9UGL1 1544 aa38.22■■■■□ 3.71
SSBP4-209ENST00000601357 ASXL2Q76L83 1435 aa38.19■■■■□ 3.7
SSBP4-209ENST00000601357 PLB1Q6P1J6 1458 aa38.17■■■■□ 3.7
SSBP4-209ENST00000601357 ZCCHC11Q5TAX3 1644 aaKnown RBP38.13■■■■□ 3.69
SSBP4-209ENST00000601357 GLI2P10070 1586 aa38.1■■■■□ 3.69
SSBP4-209ENST00000601357 TSPOAP1O95153 1857 aa38.07■■■■□ 3.69
SSBP4-209ENST00000601357 ABCA8O94911 1581 aa38.07■■■■□ 3.69
SSBP4-209ENST00000601357 SAMD9Q5K651 1589 aa38■■■■□ 3.67
SSBP4-209ENST00000601357 EPRSP07814 1512 aaKnown RBP37.98■■■■□ 3.67
SSBP4-209ENST00000601357 PPRC1Q5VV67 1664 aaKnown RBP37.97■■■■□ 3.67
SSBP4-209ENST00000601357 KDM6BO15054 1643 aa37.94■■■■□ 3.66
SSBP4-209ENST00000601357 KIF21BO75037 1637 aa37.94■■■■□ 3.66
SSBP4-209ENST00000601357 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
SSBP4-209ENST00000601357 FAM9AQ8IZU1 332 aaPredicted RBP37.92■■■■□ 3.66
SSBP4-209ENST00000601357 MAP3K4Q9Y6R4 1608 aa37.91■■■■□ 3.66
SSBP4-209ENST00000601357 WDR7Q9Y4E6 1490 aa37.9■■■■□ 3.66
SSBP4-209ENST00000601357 P3H3Q8IVL6 736 aa37.86■■■■□ 3.65
SSBP4-209ENST00000601357 RAPGEF6Q8TEU7 1601 aa37.73■■■■□ 3.63
SSBP4-209ENST00000601357 ATP10BO94823 1461 aa37.72■■■■□ 3.63
SSBP4-209ENST00000601357 TEX14Q8IWB6 1497 aa37.71■■■■□ 3.63
SSBP4-209ENST00000601357 CFAP43Q8NDM7 1665 aa37.68■■■■□ 3.62
SSBP4-209ENST00000601357 EFCAB5A4FU69 1503 aa37.67■■■■□ 3.62
SSBP4-209ENST00000601357 FHOD3Q2V2M9 1422 aa37.66■■■■□ 3.62
SSBP4-209ENST00000601357 AEBP2Q6ZN18 517 aaPredicted RBP37.65■■■■□ 3.62
SSBP4-209ENST00000601357 RANGAP1P46060 587 aaPredicted RBP37.64■■■■□ 3.62
SSBP4-209ENST00000601357 COL17A1Q9UMD9 1497 aaPredicted RBP37.63■■■■□ 3.61
SSBP4-209ENST00000601357 MAGI3Q5TCQ9 1506 aa37.61■■■■□ 3.61
SSBP4-209ENST00000601357 ARID3CA6NKF2 412 aa37.6■■■■□ 3.61
SSBP4-209ENST00000601357 KCNH8Q96L42 1107 aa37.6■■■■□ 3.61
SSBP4-209ENST00000601357 CD109Q6YHK3 1445 aa37.6■■■■□ 3.61
SSBP4-209ENST00000601357 NUP153P49790 1475 aaKnown RBP37.59■■■■□ 3.61
SSBP4-209ENST00000601357 ABCA9Q8IUA7 1624 aa37.49■■■■□ 3.59
SSBP4-209ENST00000601357 UBTFP17480 764 aaKnown RBP37.48■■■■□ 3.59
SSBP4-209ENST00000601357 EHMT2Q96KQ7 1210 aa37.45■■■■□ 3.59
SSBP4-209ENST00000601357 ARHGAP35Q9NRY4 1499 aa37.38■■■■□ 3.57
SSBP4-209ENST00000601357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.37■■■■□ 3.57
SSBP4-209ENST00000601357 HNRNPUL2Q1KMD3 747 aaKnown RBP37.37■■■■□ 3.57
SSBP4-209ENST00000601357 KDM4FA0A1W2PPD8 638 aa37.35■■■■□ 3.57
SSBP4-209ENST00000601357 ARAP3Q8WWN8 1544 aa37.31■■■■□ 3.56
SSBP4-209ENST00000601357 FMN1Q68DA7 1419 aa37.29■■■■□ 3.56
SSBP4-209ENST00000601357 PLEKHD1A6NEE1 506 aa37.25■■■■□ 3.55
SSBP4-209ENST00000601357 PHLDB1Q86UU1 1377 aa37.24■■■■□ 3.55
SSBP4-209ENST00000601357 CDK13Q14004 1512 aaKnown RBP37.24■■■■□ 3.55
SSBP4-209ENST00000601357 HECW1Q76N89 1606 aa37.21■■■■□ 3.55
SSBP4-209ENST00000601357 NEO1Q92859 1461 aa37.21■■■■□ 3.55
SSBP4-209ENST00000601357 ADGRL1O94910 1474 aa37.18■■■■□ 3.54
SSBP4-209ENST00000601357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.17■■■■□ 3.546e-7■■■□□ 16.8
SSBP4-209ENST00000601357 TTC37Q6PGP7 1564 aa37.12■■■■□ 3.53
SSBP4-209ENST00000601357 FRMPD1Q5SYB0 1578 aa37.06■■■■□ 3.52
SSBP4-209ENST00000601357 LRRIQ1Q96JM4 1722 aa37.06■■■■□ 3.52
SSBP4-209ENST00000601357 CFAP74Q9C0B2 1584 aa37.04■■■■□ 3.52
SSBP4-209ENST00000601357 ATP1B4Q9UN42 357 aaPredicted RBP37.03■■■■□ 3.52
SSBP4-209ENST00000601357 FANCAO15360 1455 aa37.01■■■■□ 3.52
SSBP4-209ENST00000601357 RAPGEF3O95398 923 aa37.01■■■■□ 3.52
SSBP4-209ENST00000601357 PCF11O94913 1555 aaKnown RBP36.97■■■■□ 3.51
SSBP4-209ENST00000601357 AKNAQ7Z591 1439 aa36.97■■■■□ 3.51
SSBP4-209ENST00000601357 CASKIN1Q8WXD9 1431 aa36.95■■■■□ 3.51
SSBP4-209ENST00000601357 RICTORQ6R327 1708 aa36.95■■■■□ 3.51
SSBP4-209ENST00000601357 CDK11AQ9UQ88 783 aaPredicted RBP36.94■■■■□ 3.5
SSBP4-209ENST00000601357 PLCH2O75038 1416 aa36.93■■■■□ 3.5
SSBP4-209ENST00000601357 TROQ12816 1431 aaPredicted RBP36.92■■■■□ 3.5
SSBP4-209ENST00000601357 KIF14Q15058 1648 aa36.92■■■■□ 3.5
SSBP4-209ENST00000601357 DENND4BO75064 1496 aaPredicted RBP36.91■■■■□ 3.5
SSBP4-209ENST00000601357 CLIP1P30622 1438 aa36.9■■■■□ 3.5
SSBP4-209ENST00000601357 MYO5CQ9NQX4 1742 aa36.88■■■■□ 3.49
SSBP4-209ENST00000601357 CCDC18Q5T9S5 1454 aa36.87■■■■□ 3.49
SSBP4-209ENST00000601357 FYCO1Q9BQS8 1478 aa36.84■■■■□ 3.49
SSBP4-209ENST00000601357 ZMYM4Q5VZL5 1548 aa36.82■■■■□ 3.48
SSBP4-209ENST00000601357 ARHGEF40Q8TER5 1519 aa36.81■■■■□ 3.48
SSBP4-209ENST00000601357 POGZQ7Z3K3 1410 aa36.73■■■■□ 3.47
SSBP4-209ENST00000601357 SCAPERQ9BY12 1400 aa36.73■■■■□ 3.47
SSBP4-209ENST00000601357 ADAMTSL3P82987 1691 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms