RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
PSMC4-205ENST00000601194 RAPGEF2Q9Y4G8 1499 aa24.08■■□□□ 1.45
PSMC4-205ENST00000601194 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
PSMC4-205ENST00000601194 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
PSMC4-205ENST00000601194 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
PSMC4-205ENST00000601194 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
PSMC4-205ENST00000601194 EEA1Q15075 1411 aa23.99■■□□□ 1.43
PSMC4-205ENST00000601194 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
PSMC4-205ENST00000601194 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
PSMC4-205ENST00000601194 FAM9AQ8IZU1 332 aaPredicted RBP23.85■■□□□ 1.41
PSMC4-205ENST00000601194 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
PSMC4-205ENST00000601194 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.4
PSMC4-205ENST00000601194 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
PSMC4-205ENST00000601194 DISP1Q96F81 1524 aa23.8■■□□□ 1.4
PSMC4-205ENST00000601194 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
PSMC4-205ENST00000601194 KIF21BO75037 1637 aa23.75■■□□□ 1.39
PSMC4-205ENST00000601194 PTPRGP23470 1445 aa23.75■■□□□ 1.39
PSMC4-205ENST00000601194 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
PSMC4-205ENST00000601194 ADCY10Q96PN6 1610 aa23.69■■□□□ 1.38
PSMC4-205ENST00000601194 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
PSMC4-205ENST00000601194 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
PSMC4-205ENST00000601194 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
PSMC4-205ENST00000601194 UHRF1BP1LA0JNW5 1464 aa23.59■■□□□ 1.37
PSMC4-205ENST00000601194 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
PSMC4-205ENST00000601194 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
PSMC4-205ENST00000601194 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
PSMC4-205ENST00000601194 MAPKBP1O60336 1514 aa23.55■■□□□ 1.36
PSMC4-205ENST00000601194 ABCC2Q92887 1545 aa23.55■■□□□ 1.36
PSMC4-205ENST00000601194 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
PSMC4-205ENST00000601194 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
PSMC4-205ENST00000601194 PLB1Q6P1J6 1458 aa23.5■■□□□ 1.35
PSMC4-205ENST00000601194 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
PSMC4-205ENST00000601194 ABCA8O94911 1581 aa23.48■■□□□ 1.35
PSMC4-205ENST00000601194 RANGAP1P46060 587 aaPredicted RBP23.47■■□□□ 1.35
PSMC4-205ENST00000601194 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
PSMC4-205ENST00000601194 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
PSMC4-205ENST00000601194 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
PSMC4-205ENST00000601194 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
PSMC4-205ENST00000601194 ASXL2Q76L83 1435 aa23.4■■□□□ 1.34
PSMC4-205ENST00000601194 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
PSMC4-205ENST00000601194 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
PSMC4-205ENST00000601194 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
PSMC4-205ENST00000601194 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
PSMC4-205ENST00000601194 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
PSMC4-205ENST00000601194 RAPGEF6Q8TEU7 1601 aa23.32■■□□□ 1.32
PSMC4-205ENST00000601194 ATP10BO94823 1461 aa23.29■■□□□ 1.32
PSMC4-205ENST00000601194 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
PSMC4-205ENST00000601194 WDR7Q9Y4E6 1490 aa23.28■■□□□ 1.32
PSMC4-205ENST00000601194 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
PSMC4-205ENST00000601194 GLI2P10070 1586 aa23.26■■□□□ 1.31
PSMC4-205ENST00000601194 ARID3CA6NKF2 412 aa23.25■■□□□ 1.31
PSMC4-205ENST00000601194 FMN1Q68DA7 1419 aa23.23■■□□□ 1.31
PSMC4-205ENST00000601194 CLIP1P30622 1438 aa23.18■■□□□ 1.3
PSMC4-205ENST00000601194 MAP3K4Q9Y6R4 1608 aa23.15■■□□□ 1.3
PSMC4-205ENST00000601194 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
PSMC4-205ENST00000601194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.12■■□□□ 1.29
PSMC4-205ENST00000601194 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
PSMC4-205ENST00000601194 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
PSMC4-205ENST00000601194 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
PSMC4-205ENST00000601194 PPRC1Q5VV67 1664 aaKnown RBP23.11■■□□□ 1.29
PSMC4-205ENST00000601194 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
PSMC4-205ENST00000601194 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.29
PSMC4-205ENST00000601194 CEP162Q5TB80 1403 aa23.08■■□□□ 1.28
PSMC4-205ENST00000601194 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
PSMC4-205ENST00000601194 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
PSMC4-205ENST00000601194 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
PSMC4-205ENST00000601194 CD109Q6YHK3 1445 aa23.05■■□□□ 1.28
PSMC4-205ENST00000601194 PCF11O94913 1555 aaKnown RBP23.05■■□□□ 1.28
PSMC4-205ENST00000601194 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
PSMC4-205ENST00000601194 TEX14Q8IWB6 1497 aa23.04■■□□□ 1.28
PSMC4-205ENST00000601194 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
PSMC4-205ENST00000601194 ABCA9Q8IUA7 1624 aa23.02■■□□□ 1.28
PSMC4-205ENST00000601194 KDM6BO15054 1643 aa23■■□□□ 1.27
PSMC4-205ENST00000601194 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
PSMC4-205ENST00000601194 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
PSMC4-205ENST00000601194 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
PSMC4-205ENST00000601194 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
PSMC4-205ENST00000601194 COL17A1Q9UMD9 1497 aaPredicted RBP22.93■■□□□ 1.26
PSMC4-205ENST00000601194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
PSMC4-205ENST00000601194 TROQ12816 1431 aaPredicted RBP22.91■■□□□ 1.26
PSMC4-205ENST00000601194 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
PSMC4-205ENST00000601194 KIF14Q15058 1648 aa22.85■■□□□ 1.25
PSMC4-205ENST00000601194 NEO1Q92859 1461 aa22.85■■□□□ 1.25
PSMC4-205ENST00000601194 PHLDB1Q86UU1 1377 aa22.84■■□□□ 1.25
PSMC4-205ENST00000601194 ARAP3Q8WWN8 1544 aa22.83■■□□□ 1.25
PSMC4-205ENST00000601194 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
PSMC4-205ENST00000601194 FANCAO15360 1455 aa22.79■■□□□ 1.24
PSMC4-205ENST00000601194 PLCH2O75038 1416 aa22.79■■□□□ 1.24
PSMC4-205ENST00000601194 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
PSMC4-205ENST00000601194 AKNAQ7Z591 1439 aa22.74■■□□□ 1.23
PSMC4-205ENST00000601194 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
PSMC4-205ENST00000601194 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
PSMC4-205ENST00000601194 FRMPD1Q5SYB0 1578 aa22.69■■□□□ 1.22
PSMC4-205ENST00000601194 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
PSMC4-205ENST00000601194 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
PSMC4-205ENST00000601194 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
PSMC4-205ENST00000601194 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
PSMC4-205ENST00000601194 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
PSMC4-205ENST00000601194 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
PSMC4-205ENST00000601194 ADGRL1O94910 1474 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms