RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 CEP170Q5SW79 1584 aa35.54■■■■□ 3.28
SNRNP70-209ENST00000601065 NUP160Q12769 1436 aa35.53■■■■□ 3.28
SNRNP70-209ENST00000601065 CEP162Q5TB80 1403 aa35.46■■■■□ 3.27
SNRNP70-209ENST00000601065 KIAA0586Q9BVV6 1533 aa35.45■■■■□ 3.27
SNRNP70-209ENST00000601065 IQGAP2Q13576 1575 aa35.42■■■■□ 3.26
SNRNP70-209ENST00000601065 RANGAP1P46060 587 aaPredicted RBP35.37■■■■□ 3.25
SNRNP70-209ENST00000601065 CLIP1P30622 1438 aa35.35■■■■□ 3.25
SNRNP70-209ENST00000601065 CLASP1Q7Z460 1538 aa35.26■■■■□ 3.23
SNRNP70-209ENST00000601065 UGGT2Q9NYU1 1516 aa35.25■■■■□ 3.23
SNRNP70-209ENST00000601065 ARHGAP35Q9NRY4 1499 aa35.24■■■■□ 3.23
SNRNP70-209ENST00000601065 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
SNRNP70-209ENST00000601065 EFCAB5A4FU69 1503 aa35.21■■■■□ 3.23
SNRNP70-209ENST00000601065 SAMD9Q5K651 1589 aa35.19■■■■□ 3.22
SNRNP70-209ENST00000601065 JPH4Q96JJ6 628 aa35.19■■■■□ 3.22
SNRNP70-209ENST00000601065 SHROOM2Q13796 1616 aa35.14■■■■□ 3.22
SNRNP70-209ENST00000601065 ARAP1Q96P48 1450 aa35.11■■■■□ 3.21
SNRNP70-209ENST00000601065 DISP1Q96F81 1524 aa35.11■■■■□ 3.21
SNRNP70-209ENST00000601065 P3H3Q8IVL6 736 aa35.08■■■■□ 3.21
SNRNP70-209ENST00000601065 KIAA0556O60303 1618 aa35.07■■■■□ 3.21
SNRNP70-209ENST00000601065 FHOD3Q2V2M9 1422 aa35.05■■■■□ 3.2
SNRNP70-209ENST00000601065 PRG4Q92954 1404 aaPredicted RBP35.03■■■■□ 3.2
SNRNP70-209ENST00000601065 CARMIL2Q6F5E8 1435 aa35.02■■■■□ 3.2
SNRNP70-209ENST00000601065 VPS8Q8N3P4 1428 aa34.95■■■■□ 3.19
SNRNP70-209ENST00000601065 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
SNRNP70-209ENST00000601065 FMN1Q68DA7 1419 aa34.87■■■■□ 3.17
SNRNP70-209ENST00000601065 TTBK1Q5TCY1 1321 aaPredicted RBP34.77■■■■□ 3.16
SNRNP70-209ENST00000601065 PCF11O94913 1555 aaKnown RBP34.76■■■■□ 3.15
SNRNP70-209ENST00000601065 PTPRGP23470 1445 aa34.74■■■■□ 3.15
SNRNP70-209ENST00000601065 CASKIN1Q8WXD9 1431 aa34.73■■■■□ 3.15
SNRNP70-209ENST00000601065 FYCO1Q9BQS8 1478 aa34.7■■■■□ 3.14
SNRNP70-209ENST00000601065 ARHGEF11O15085 1522 aa34.66■■■■□ 3.14
SNRNP70-209ENST00000601065 PLB1Q6P1J6 1458 aa34.65■■■■□ 3.14
SNRNP70-209ENST00000601065 RAPGEF6Q8TEU7 1601 aa34.64■■■■□ 3.14
SNRNP70-209ENST00000601065 ABCA8O94911 1581 aa34.61■■■■□ 3.13
SNRNP70-209ENST00000601065 ATP1B4Q9UN42 357 aaPredicted RBP34.59■■■■□ 3.13
SNRNP70-209ENST00000601065 HECW1Q76N89 1606 aa34.59■■■■□ 3.13
SNRNP70-209ENST00000601065 RIMBP3CA6NJZ7 1639 aa34.55■■■■□ 3.12
SNRNP70-209ENST00000601065 RIMBP3BA6NNM3 1639 aa34.55■■■■□ 3.12
SNRNP70-209ENST00000601065 RIMBP3Q9UFD9 1639 aa34.55■■■■□ 3.12
SNRNP70-209ENST00000601065 UACAQ9BZF9 1416 aa34.55■■■■□ 3.12
SNRNP70-209ENST00000601065 LRRIQ1Q96JM4 1722 aa34.54■■■■□ 3.12
SNRNP70-209ENST00000601065 NUP153P49790 1475 aaKnown RBP34.54■■■■□ 3.12
SNRNP70-209ENST00000601065 APLP2Q06481 763 aa34.53■■■■□ 3.12
SNRNP70-209ENST00000601065 MAP3K1Q13233 1512 aa34.48■■■■□ 3.11
SNRNP70-209ENST00000601065 EPRSP07814 1512 aaKnown RBP34.48■■■■□ 3.11
SNRNP70-209ENST00000601065 ABCC2Q92887 1545 aa34.47■■■■□ 3.11
SNRNP70-209ENST00000601065 TIAM1Q13009 1591 aa34.47■■■■□ 3.11
SNRNP70-209ENST00000601065 CCDC18Q5T9S5 1454 aa34.46■■■■□ 3.11
SNRNP70-209ENST00000601065 CFAP43Q8NDM7 1665 aa34.45■■■■□ 3.11
SNRNP70-209ENST00000601065 UHRF1BP1LA0JNW5 1464 aa34.44■■■■□ 3.1
SNRNP70-209ENST00000601065 CDK13Q14004 1512 aaKnown RBP34.41■■■■□ 3.1
SNRNP70-209ENST00000601065 ARID3CA6NKF2 412 aa34.41■■■■□ 3.1
SNRNP70-209ENST00000601065 ADCY10Q96PN6 1610 aa34.37■■■■□ 3.09
SNRNP70-209ENST00000601065 PPARGC1BQ86YN6 1023 aaKnown RBP34.36■■■■□ 3.09
SNRNP70-209ENST00000601065 ATP10BO94823 1461 aa34.35■■■■□ 3.09
SNRNP70-209ENST00000601065 KANK4Q5T7N3 995 aaPredicted RBP34.34■■■■□ 3.09
SNRNP70-209ENST00000601065 LRRC9Q6ZRR7 1453 aa34.31■■■■□ 3.08
SNRNP70-209ENST00000601065 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
SNRNP70-209ENST00000601065 KDM5BQ9UGL1 1544 aa34.29■■■■□ 3.08
SNRNP70-209ENST00000601065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.28■■■■□ 3.08
SNRNP70-209ENST00000601065 HNRNPUL2Q1KMD3 747 aaKnown RBP34.28■■■■□ 3.08
SNRNP70-209ENST00000601065 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
SNRNP70-209ENST00000601065 ZCCHC11Q5TAX3 1644 aaKnown RBP34.24■■■■□ 3.07
SNRNP70-209ENST00000601065 MTUS2Q5JR59 1369 aa34.22■■■■□ 3.07
SNRNP70-209ENST00000601065 CDK11AQ9UQ88 783 aaPredicted RBP34.21■■■■□ 3.07
SNRNP70-209ENST00000601065 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.06
SNRNP70-209ENST00000601065 DNAJC5Q9H3Z4 198 aa34.16■■■■□ 3.06
SNRNP70-209ENST00000601065 PLEKHD1A6NEE1 506 aa34.13■■■■□ 3.05
SNRNP70-209ENST00000601065 TROQ12816 1431 aaPredicted RBP34.12■■■■□ 3.05
SNRNP70-209ENST00000601065 NPM1P06748 294 aaKnown RBP eCLIP34.09■■■■□ 3.05
SNRNP70-209ENST00000601065 SUPT6HQ7KZ85 1726 aaKnown RBP34.07■■■■□ 3.04
SNRNP70-209ENST00000601065 NCOA2Q15596 1464 aa34.02■■■■□ 3.04
SNRNP70-209ENST00000601065 KIF14Q15058 1648 aa33.99■■■■□ 3.03
SNRNP70-209ENST00000601065 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
SNRNP70-209ENST00000601065 WDR7Q9Y4E6 1490 aa33.98■■■■□ 3.03
SNRNP70-209ENST00000601065 PHLDB1Q86UU1 1377 aa33.95■■■■□ 3.03
SNRNP70-209ENST00000601065 MAPKBP1O60336 1514 aa33.93■■■■□ 3.02
SNRNP70-209ENST00000601065 KCNH8Q96L42 1107 aa33.88■■■■□ 3.01
SNRNP70-209ENST00000601065 ABCC10Q5T3U5 1492 aa33.88■■■■□ 3.01
SNRNP70-209ENST00000601065 TRIM26Q12899 539 aaPredicted RBP33.87■■■■□ 3.01
SNRNP70-209ENST00000601065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.84■■■■□ 3.013e-8■■■□□ 15.3
SNRNP70-209ENST00000601065 MYOM3Q5VTT5 1437 aa33.84■■■■□ 3.01
SNRNP70-209ENST00000601065 CCNB3Q8WWL7 1395 aa33.82■■■■□ 3.01
SNRNP70-209ENST00000601065 TTC37Q6PGP7 1564 aa33.81■■■■□ 3
SNRNP70-209ENST00000601065 RRBP1Q9P2E9 1410 aaKnown RBP33.79■■■■□ 3
SNRNP70-209ENST00000601065 GPATCH8Q9UKJ3 1502 aaKnown RBP33.78■■■■□ 3
SNRNP70-209ENST00000601065 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
SNRNP70-209ENST00000601065 FGD6Q6ZV73 1430 aa33.76■■■■□ 3
SNRNP70-209ENST00000601065 CDC42BPAQ5VT25 1732 aa33.76■■■□□ 2.99
SNRNP70-209ENST00000601065 ITSN2Q9NZM3 1697 aa33.75■■■□□ 2.99
SNRNP70-209ENST00000601065 ABCA9Q8IUA7 1624 aa33.74■■■□□ 2.99
SNRNP70-209ENST00000601065 MIA2Q96PC5 1412 aa33.72■■■□□ 2.99
SNRNP70-209ENST00000601065 MYO5CQ9NQX4 1742 aa33.69■■■□□ 2.98
SNRNP70-209ENST00000601065 PREX2Q70Z35 1606 aa33.69■■■□□ 2.98
SNRNP70-209ENST00000601065 PTPN23Q9H3S7 1636 aa33.66■■■□□ 2.98
SNRNP70-209ENST00000601065 CDC42BPBQ9Y5S2 1711 aa33.66■■■□□ 2.98
SNRNP70-209ENST00000601065 CFDP1Q9UEE9 299 aaPredicted RBP33.65■■■□□ 2.98
SNRNP70-209ENST00000601065 PLCH2O75038 1416 aa33.63■■■□□ 2.97
SNRNP70-209ENST00000601065 DIP2BQ9P265 1576 aa33.63■■■□□ 2.97
SNRNP70-209ENST00000601065 GLI2P10070 1586 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms