RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 NUP160Q12769 1436 aa37.32■■■■□ 3.56
IRF3-227ENST00000600911 TNIKQ9UKE5 1360 aa37.29■■■■□ 3.56
IRF3-227ENST00000600911 KIAA0586Q9BVV6 1533 aa37.16■■■■□ 3.54
IRF3-227ENST00000600911 IQGAP2Q13576 1575 aa37.16■■■■□ 3.54
IRF3-227ENST00000600911 CLASP1Q7Z460 1538 aa37.14■■■■□ 3.54
IRF3-227ENST00000600911 RANGAP1P46060 587 aaPredicted RBP37.12■■■■□ 3.53
IRF3-227ENST00000600911 CEP162Q5TB80 1403 aa37.07■■■■□ 3.52
IRF3-227ENST00000600911 OSCARQ8IYS5 282 aa36.99■■■■□ 3.51
IRF3-227ENST00000600911 SHROOM2Q13796 1616 aa36.97■■■■□ 3.51
IRF3-227ENST00000600911 UGGT2Q9NYU1 1516 aa36.97■■■■□ 3.51
IRF3-227ENST00000600911 CLIP1P30622 1438 aa36.95■■■■□ 3.51
IRF3-227ENST00000600911 ARHGAP35Q9NRY4 1499 aa36.94■■■■□ 3.5
IRF3-227ENST00000600911 SAMD9Q5K651 1589 aa36.93■■■■□ 3.5
IRF3-227ENST00000600911 JPH4Q96JJ6 628 aa36.92■■■■□ 3.5
IRF3-227ENST00000600911 DISP1Q96F81 1524 aa36.89■■■■□ 3.5
IRF3-227ENST00000600911 ERCC6L2Q5T890 1561 aa36.88■■■■□ 3.49
IRF3-227ENST00000600911 KIAA0556O60303 1618 aa36.84■■■■□ 3.49
IRF3-227ENST00000600911 P3H3Q8IVL6 736 aa36.84■■■■□ 3.49
IRF3-227ENST00000600911 ARAP1Q96P48 1450 aa36.82■■■■□ 3.48
IRF3-227ENST00000600911 EFCAB5A4FU69 1503 aa36.82■■■■□ 3.48
IRF3-227ENST00000600911 PRG4Q92954 1404 aaPredicted RBP36.81■■■■□ 3.48
IRF3-227ENST00000600911 FHOD3Q2V2M9 1422 aa36.79■■■■□ 3.48
IRF3-227ENST00000600911 CARMIL2Q6F5E8 1435 aa36.64■■■■□ 3.46
IRF3-227ENST00000600911 TTBK1Q5TCY1 1321 aaPredicted RBP36.58■■■■□ 3.45
IRF3-227ENST00000600911 ARHGEF11O15085 1522 aa36.55■■■■□ 3.44
IRF3-227ENST00000600911 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.44
IRF3-227ENST00000600911 RIMBP3CA6NJZ7 1639 aa36.49■■■■□ 3.43
IRF3-227ENST00000600911 RIMBP3BA6NNM3 1639 aa36.49■■■■□ 3.43
IRF3-227ENST00000600911 RIMBP3Q9UFD9 1639 aa36.49■■■■□ 3.43
IRF3-227ENST00000600911 PCF11O94913 1555 aaKnown RBP36.48■■■■□ 3.43
IRF3-227ENST00000600911 PTPRGP23470 1445 aa36.43■■■■□ 3.42
IRF3-227ENST00000600911 FMN1Q68DA7 1419 aa36.42■■■■□ 3.42
IRF3-227ENST00000600911 PLB1Q6P1J6 1458 aa36.41■■■■□ 3.42
IRF3-227ENST00000600911 LRRIQ1Q96JM4 1722 aa36.39■■■■□ 3.42
IRF3-227ENST00000600911 ABCA8O94911 1581 aa36.36■■■■□ 3.41
IRF3-227ENST00000600911 RAPGEF6Q8TEU7 1601 aa36.36■■■■□ 3.41
IRF3-227ENST00000600911 CASKIN1Q8WXD9 1431 aa36.32■■■■□ 3.41
IRF3-227ENST00000600911 FYCO1Q9BQS8 1478 aa36.29■■■■□ 3.4
IRF3-227ENST00000600911 NUP153P49790 1475 aaKnown RBP36.25■■■■□ 3.39
IRF3-227ENST00000600911 HECW1Q76N89 1606 aa36.24■■■■□ 3.39
IRF3-227ENST00000600911 UACAQ9BZF9 1416 aa36.23■■■■□ 3.39
IRF3-227ENST00000600911 ATP1B4Q9UN42 357 aaPredicted RBP36.23■■■■□ 3.39
IRF3-227ENST00000600911 ADCY10Q96PN6 1610 aa36.21■■■■□ 3.39
IRF3-227ENST00000600911 ARID3CA6NKF2 412 aa36.19■■■■□ 3.38
IRF3-227ENST00000600911 ABCC2Q92887 1545 aa36.19■■■■□ 3.38
IRF3-227ENST00000600911 CDK13Q14004 1512 aaKnown RBP36.17■■■■□ 3.38
IRF3-227ENST00000600911 EPRSP07814 1512 aaKnown RBP36.14■■■■□ 3.38
IRF3-227ENST00000600911 CYB5RLQ6IPT4 315 aa36.12■■■■□ 3.37
IRF3-227ENST00000600911 UHRF1BP1LA0JNW5 1464 aa36.12■■■■□ 3.37
IRF3-227ENST00000600911 CFAP43Q8NDM7 1665 aa36.12■■■■□ 3.37
IRF3-227ENST00000600911 DNAJC5Q9H3Z4 198 aa36.12■■■■□ 3.37
IRF3-227ENST00000600911 TIAM1Q13009 1591 aa36.1■■■■□ 3.37
IRF3-227ENST00000600911 ATP10BO94823 1461 aa36.07■■■■□ 3.36
IRF3-227ENST00000600911 PPARGC1BQ86YN6 1023 aaKnown RBP36.04■■■■□ 3.36
IRF3-227ENST00000600911 ZCCHC11Q5TAX3 1644 aaKnown RBP36.03■■■■□ 3.36
IRF3-227ENST00000600911 MAGI3Q5TCQ9 1506 aa36.01■■■■□ 3.36
IRF3-227ENST00000600911 CCDC18Q5T9S5 1454 aa36.01■■■■□ 3.35
IRF3-227ENST00000600911 KDM5BQ9UGL1 1544 aa35.99■■■■□ 3.35
IRF3-227ENST00000600911 KANK4Q5T7N3 995 aaPredicted RBP35.99■■■■□ 3.35
IRF3-227ENST00000600911 MAP3K1Q13233 1512 aa35.99■■■■□ 3.35
IRF3-227ENST00000600911 APLP2Q06481 763 aa35.9■■■■□ 3.34
IRF3-227ENST00000600911 LRRC9Q6ZRR7 1453 aa35.9■■■■□ 3.34
IRF3-227ENST00000600911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.9■■■■□ 3.34
IRF3-227ENST00000600911 HNRNPUL2Q1KMD3 747 aaKnown RBP35.9■■■■□ 3.34
IRF3-227ENST00000600911 EHBP1L1Q8N3D4 1523 aa35.78■■■■□ 3.32
IRF3-227ENST00000600911 MTUS2Q5JR59 1369 aa35.77■■■■□ 3.32
IRF3-227ENST00000600911 KIF14Q15058 1648 aa35.76■■■■□ 3.31
IRF3-227ENST00000600911 TROQ12816 1431 aaPredicted RBP35.74■■■■□ 3.31
IRF3-227ENST00000600911 ASXL2Q76L83 1435 aa35.71■■■■□ 3.31
IRF3-227ENST00000600911 PLEKHD1A6NEE1 506 aa35.68■■■■□ 3.3
IRF3-227ENST00000600911 NPM1P06748 294 aaKnown RBP eCLIP35.68■■■■□ 3.3
IRF3-227ENST00000600911 SUPT6HQ7KZ85 1726 aaKnown RBP35.67■■■■□ 3.3
IRF3-227ENST00000600911 WDR7Q9Y4E6 1490 aa35.66■■■■□ 3.3
IRF3-227ENST00000600911 CDK11AQ9UQ88 783 aaPredicted RBP35.66■■■■□ 3.3
IRF3-227ENST00000600911 MAPKBP1O60336 1514 aa35.65■■■■□ 3.3
IRF3-227ENST00000600911 NCOA2Q15596 1464 aa35.63■■■■□ 3.29
IRF3-227ENST00000600911 KCNH8Q96L42 1107 aa35.57■■■■□ 3.29
IRF3-227ENST00000600911 PHLDB1Q86UU1 1377 aa35.57■■■■□ 3.28
IRF3-227ENST00000600911 ABCC10Q5T3U5 1492 aa35.57■■■■□ 3.28
IRF3-227ENST00000600911 TTC37Q6PGP7 1564 aa35.56■■■■□ 3.28
IRF3-227ENST00000600911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.55■■■■□ 3.283e-7■□□□□ 11.1
IRF3-227ENST00000600911 CDC42BPAQ5VT25 1732 aa35.49■■■■□ 3.27
IRF3-227ENST00000600911 ABCA9Q8IUA7 1624 aa35.44■■■■□ 3.26
IRF3-227ENST00000600911 DIP2BQ9P265 1576 aa35.44■■■■□ 3.26
IRF3-227ENST00000600911 GPATCH8Q9UKJ3 1502 aaKnown RBP35.41■■■■□ 3.26
IRF3-227ENST00000600911 CDC42BPBQ9Y5S2 1711 aa35.4■■■■□ 3.26
IRF3-227ENST00000600911 KIF13AQ9H1H9 1805 aa35.39■■■■□ 3.26
IRF3-227ENST00000600911 MYOM3Q5VTT5 1437 aa35.38■■■■□ 3.25
IRF3-227ENST00000600911 MYO5CQ9NQX4 1742 aa35.38■■■■□ 3.25
IRF3-227ENST00000600911 PREX2Q70Z35 1606 aa35.37■■■■□ 3.25
IRF3-227ENST00000600911 CCNB3Q8WWL7 1395 aa35.37■■■■□ 3.25
IRF3-227ENST00000600911 ITSN2Q9NZM3 1697 aa35.35■■■■□ 3.25
IRF3-227ENST00000600911 GLI2P10070 1586 aa35.33■■■■□ 3.25
IRF3-227ENST00000600911 FGD6Q6ZV73 1430 aa35.31■■■■□ 3.24
IRF3-227ENST00000600911 MAP3K4Q9Y6R4 1608 aa35.3■■■■□ 3.24
IRF3-227ENST00000600911 RRBP1Q9P2E9 1410 aaKnown RBP35.29■■■■□ 3.24
IRF3-227ENST00000600911 PTPN23Q9H3S7 1636 aa35.26■■■■□ 3.23
IRF3-227ENST00000600911 FAM69CQ0P6D2 419 aa35.25■■■■□ 3.23
IRF3-227ENST00000600911 PLCH2O75038 1416 aa35.24■■■■□ 3.23
IRF3-227ENST00000600911 ZNF644Q9H582 1327 aaPredicted RBP35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms