RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
LINC01872-203ENST00000600813 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
LINC01872-203ENST00000600813 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
LINC01872-203ENST00000600813 KIAA0586Q9BVV6 1533 aa23.35■■□□□ 1.33
LINC01872-203ENST00000600813 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
LINC01872-203ENST00000600813 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
LINC01872-203ENST00000600813 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
LINC01872-203ENST00000600813 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
LINC01872-203ENST00000600813 EEA1Q15075 1411 aa23.23■■□□□ 1.31
LINC01872-203ENST00000600813 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
LINC01872-203ENST00000600813 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
LINC01872-203ENST00000600813 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
LINC01872-203ENST00000600813 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
LINC01872-203ENST00000600813 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.29
LINC01872-203ENST00000600813 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
LINC01872-203ENST00000600813 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
LINC01872-203ENST00000600813 PTPRGP23470 1445 aa23.04■■□□□ 1.28
LINC01872-203ENST00000600813 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
LINC01872-203ENST00000600813 KIF21BO75037 1637 aa23■■□□□ 1.27
LINC01872-203ENST00000600813 KIAA0556O60303 1618 aa22.97■■□□□ 1.27
LINC01872-203ENST00000600813 RANGAP1P46060 587 aaPredicted RBP22.96■■□□□ 1.27
LINC01872-203ENST00000600813 P3H3Q8IVL6 736 aa22.96■■□□□ 1.27
LINC01872-203ENST00000600813 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
LINC01872-203ENST00000600813 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
LINC01872-203ENST00000600813 TRHP20396 242 aaPredicted RBP22.92■■□□□ 1.26
LINC01872-203ENST00000600813 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
LINC01872-203ENST00000600813 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
LINC01872-203ENST00000600813 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
LINC01872-203ENST00000600813 NPM1P06748 294 aaKnown RBP eCLIP22.84■■□□□ 1.25
LINC01872-203ENST00000600813 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
LINC01872-203ENST00000600813 SAMD9Q5K651 1589 aa22.82■■□□□ 1.24
LINC01872-203ENST00000600813 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
LINC01872-203ENST00000600813 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
LINC01872-203ENST00000600813 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
LINC01872-203ENST00000600813 ABCA8O94911 1581 aa22.76■■□□□ 1.23
LINC01872-203ENST00000600813 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
LINC01872-203ENST00000600813 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
LINC01872-203ENST00000600813 ARID3CA6NKF2 412 aa22.7■■□□□ 1.22
LINC01872-203ENST00000600813 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
LINC01872-203ENST00000600813 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
LINC01872-203ENST00000600813 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
LINC01872-203ENST00000600813 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
LINC01872-203ENST00000600813 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
LINC01872-203ENST00000600813 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
LINC01872-203ENST00000600813 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
LINC01872-203ENST00000600813 KIF13AQ9H1H9 1805 aa22.64■■□□□ 1.21
LINC01872-203ENST00000600813 ATP10BO94823 1461 aa22.63■■□□□ 1.21
LINC01872-203ENST00000600813 DIP2BQ9P265 1576 aa22.6■■□□□ 1.21
LINC01872-203ENST00000600813 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
LINC01872-203ENST00000600813 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.2
LINC01872-203ENST00000600813 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
LINC01872-203ENST00000600813 EPRSP07814 1512 aaKnown RBP22.53■■□□□ 1.2
LINC01872-203ENST00000600813 CLIP1P30622 1438 aa22.52■■□□□ 1.2
LINC01872-203ENST00000600813 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
LINC01872-203ENST00000600813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
LINC01872-203ENST00000600813 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
LINC01872-203ENST00000600813 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
LINC01872-203ENST00000600813 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
LINC01872-203ENST00000600813 GLI2P10070 1586 aa22.48■■□□□ 1.19
LINC01872-203ENST00000600813 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
LINC01872-203ENST00000600813 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
LINC01872-203ENST00000600813 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
LINC01872-203ENST00000600813 PLEKHD1A6NEE1 506 aa22.4■■□□□ 1.18
LINC01872-203ENST00000600813 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
LINC01872-203ENST00000600813 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
LINC01872-203ENST00000600813 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
LINC01872-203ENST00000600813 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
LINC01872-203ENST00000600813 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
LINC01872-203ENST00000600813 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
LINC01872-203ENST00000600813 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
LINC01872-203ENST00000600813 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
LINC01872-203ENST00000600813 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
LINC01872-203ENST00000600813 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
LINC01872-203ENST00000600813 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
LINC01872-203ENST00000600813 CFAP43Q8NDM7 1665 aa22.26■■□□□ 1.15
LINC01872-203ENST00000600813 CDK11AQ9UQ88 783 aaPredicted RBP22.25■■□□□ 1.15
LINC01872-203ENST00000600813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.24■■□□□ 1.15
LINC01872-203ENST00000600813 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
LINC01872-203ENST00000600813 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
LINC01872-203ENST00000600813 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
LINC01872-203ENST00000600813 KDM6BO15054 1643 aa22.2■■□□□ 1.15
LINC01872-203ENST00000600813 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
LINC01872-203ENST00000600813 KIF14Q15058 1648 aa22.17■■□□□ 1.14
LINC01872-203ENST00000600813 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
LINC01872-203ENST00000600813 PLCH2O75038 1416 aa22.12■■□□□ 1.13
LINC01872-203ENST00000600813 RAPGEF3O95398 923 aa22.09■■□□□ 1.13
LINC01872-203ENST00000600813 ARAP3Q8WWN8 1544 aa22.09■■□□□ 1.13
LINC01872-203ENST00000600813 NEO1Q92859 1461 aa22.08■■□□□ 1.12
LINC01872-203ENST00000600813 AKNAQ7Z591 1439 aa22.07■■□□□ 1.12
LINC01872-203ENST00000600813 FANCAO15360 1455 aa22.07■■□□□ 1.12
LINC01872-203ENST00000600813 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
LINC01872-203ENST00000600813 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
LINC01872-203ENST00000600813 KANK4Q5T7N3 995 aaPredicted RBP22.03■■□□□ 1.12
LINC01872-203ENST00000600813 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
LINC01872-203ENST00000600813 MYO5CQ9NQX4 1742 aa21.99■■□□□ 1.11
LINC01872-203ENST00000600813 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
LINC01872-203ENST00000600813 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
LINC01872-203ENST00000600813 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
LINC01872-203ENST00000600813 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
LINC01872-203ENST00000600813 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms