RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
SSBP4-208ENST00000600628 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
SSBP4-208ENST00000600628 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
SSBP4-208ENST00000600628 JPH4Q96JJ6 628 aa15□□□□□ -0.01
SSBP4-208ENST00000600628 PRG4Q92954 1404 aaPredicted RBP14.98□□□□□ -0.01
SSBP4-208ENST00000600628 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
SSBP4-208ENST00000600628 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
SSBP4-208ENST00000600628 EEA1Q15075 1411 aa14.93□□□□□ -0.02
SSBP4-208ENST00000600628 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
SSBP4-208ENST00000600628 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
SSBP4-208ENST00000600628 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
SSBP4-208ENST00000600628 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
SSBP4-208ENST00000600628 ADCY10Q96PN6 1610 aa14.83□□□□□ -0.04
SSBP4-208ENST00000600628 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
SSBP4-208ENST00000600628 KIAA0556O60303 1618 aa14.81□□□□□ -0.04
SSBP4-208ENST00000600628 KIF21BO75037 1637 aa14.81□□□□□ -0.04
SSBP4-208ENST00000600628 TNIKQ9UKE5 1360 aa14.81□□□□□ -0.04
SSBP4-208ENST00000600628 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
SSBP4-208ENST00000600628 PTPRGP23470 1445 aa14.78□□□□□ -0.04
SSBP4-208ENST00000600628 UHRF1BP1LA0JNW5 1464 aa14.77□□□□□ -0.04
SSBP4-208ENST00000600628 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
SSBP4-208ENST00000600628 SAMD9Q5K651 1589 aa14.74□□□□□ -0.05
SSBP4-208ENST00000600628 GOLGA3Q08378 1498 aa14.74□□□□□ -0.05
SSBP4-208ENST00000600628 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
SSBP4-208ENST00000600628 ABCC2Q92887 1545 aa14.72□□□□□ -0.05
SSBP4-208ENST00000600628 UACAQ9BZF9 1416 aa14.71□□□□□ -0.05
SSBP4-208ENST00000600628 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.06
SSBP4-208ENST00000600628 ABCA8O94911 1581 aa14.69□□□□□ -0.06
SSBP4-208ENST00000600628 ABCC10Q5T3U5 1492 aa14.67□□□□□ -0.06
SSBP4-208ENST00000600628 DIP2BQ9P265 1576 aa14.66□□□□□ -0.06
SSBP4-208ENST00000600628 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
SSBP4-208ENST00000600628 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
SSBP4-208ENST00000600628 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
SSBP4-208ENST00000600628 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
SSBP4-208ENST00000600628 EFCAB5A4FU69 1503 aa14.62□□□□□ -0.07
SSBP4-208ENST00000600628 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
SSBP4-208ENST00000600628 GLI2P10070 1586 aa14.6□□□□□ -0.07
SSBP4-208ENST00000600628 ASXL2Q76L83 1435 aa14.59□□□□□ -0.07
SSBP4-208ENST00000600628 ARHGAP35Q9NRY4 1499 aa14.55□□□□□ -0.08
SSBP4-208ENST00000600628 EPRSP07814 1512 aaKnown RBP14.55□□□□□ -0.08
SSBP4-208ENST00000600628 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
SSBP4-208ENST00000600628 FHOD3Q2V2M9 1422 aa14.54□□□□□ -0.08
SSBP4-208ENST00000600628 ATP10BO94823 1461 aa14.54□□□□□ -0.08
SSBP4-208ENST00000600628 PPRC1Q5VV67 1664 aaKnown RBP14.53□□□□□ -0.08
SSBP4-208ENST00000600628 NUP153P49790 1475 aaKnown RBP14.53□□□□□ -0.08
SSBP4-208ENST00000600628 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
SSBP4-208ENST00000600628 FAM69CQ0P6D2 419 aa14.52□□□□□ -0.09
SSBP4-208ENST00000600628 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
SSBP4-208ENST00000600628 P3H3Q8IVL6 736 aa14.51□□□□□ -0.09
SSBP4-208ENST00000600628 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
SSBP4-208ENST00000600628 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
SSBP4-208ENST00000600628 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
SSBP4-208ENST00000600628 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
SSBP4-208ENST00000600628 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
SSBP4-208ENST00000600628 MAGI3Q5TCQ9 1506 aa14.42□□□□□ -0.1
SSBP4-208ENST00000600628 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
SSBP4-208ENST00000600628 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-208ENST00000600628 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
SSBP4-208ENST00000600628 HECW1Q76N89 1606 aa14.39□□□□□ -0.11
SSBP4-208ENST00000600628 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
SSBP4-208ENST00000600628 CLIP1P30622 1438 aa14.37□□□□□ -0.11
SSBP4-208ENST00000600628 TEX14Q8IWB6 1497 aa14.37□□□□□ -0.11
SSBP4-208ENST00000600628 KDM6BO15054 1643 aa14.37□□□□□ -0.11
SSBP4-208ENST00000600628 CDK13Q14004 1512 aaKnown RBP14.36□□□□□ -0.11
SSBP4-208ENST00000600628 CD109Q6YHK3 1445 aa14.36□□□□□ -0.11
SSBP4-208ENST00000600628 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
SSBP4-208ENST00000600628 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
SSBP4-208ENST00000600628 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
SSBP4-208ENST00000600628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
SSBP4-208ENST00000600628 ARID3CA6NKF2 412 aa14.32□□□□□ -0.12
SSBP4-208ENST00000600628 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
SSBP4-208ENST00000600628 KCNH8Q96L42 1107 aa14.31□□□□□ -0.12
SSBP4-208ENST00000600628 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
SSBP4-208ENST00000600628 PLEKHD1A6NEE1 506 aa14.29□□□□□ -0.12
SSBP4-208ENST00000600628 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
SSBP4-208ENST00000600628 TTC37Q6PGP7 1564 aa14.29□□□□□ -0.12
SSBP4-208ENST00000600628 CCDC18Q5T9S5 1454 aa14.28□□□□□ -0.12
SSBP4-208ENST00000600628 NEO1Q92859 1461 aa14.28□□□□□ -0.12
SSBP4-208ENST00000600628 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
SSBP4-208ENST00000600628 KIF14Q15058 1648 aa14.26□□□□□ -0.13
SSBP4-208ENST00000600628 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
SSBP4-208ENST00000600628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
SSBP4-208ENST00000600628 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
SSBP4-208ENST00000600628 PLCH2O75038 1416 aa14.23□□□□□ -0.13
SSBP4-208ENST00000600628 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
SSBP4-208ENST00000600628 CDK11AQ9UQ88 783 aaPredicted RBP14.21□□□□□ -0.13
SSBP4-208ENST00000600628 CFAP74Q9C0B2 1584 aa14.21□□□□□ -0.14
SSBP4-208ENST00000600628 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.14
SSBP4-208ENST00000600628 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
SSBP4-208ENST00000600628 FANCAO15360 1455 aa14.19□□□□□ -0.14
SSBP4-208ENST00000600628 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
SSBP4-208ENST00000600628 AKNAQ7Z591 1439 aa14.17□□□□□ -0.14
SSBP4-208ENST00000600628 CDC42BPAQ5VT25 1732 aa14.16□□□□□ -0.14
SSBP4-208ENST00000600628 AEBP2Q6ZN18 517 aaPredicted RBP14.16□□□□□ -0.14
SSBP4-208ENST00000600628 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
SSBP4-208ENST00000600628 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
SSBP4-208ENST00000600628 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
SSBP4-208ENST00000600628 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-208ENST00000600628 MAP3K1Q13233 1512 aa14.13□□□□□ -0.15
SSBP4-208ENST00000600628 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms