RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
ARHGEF1-222ENST00000600517 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
ARHGEF1-222ENST00000600517 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
ARHGEF1-222ENST00000600517 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
ARHGEF1-222ENST00000600517 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
ARHGEF1-222ENST00000600517 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
ARHGEF1-222ENST00000600517 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
ARHGEF1-222ENST00000600517 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
ARHGEF1-222ENST00000600517 EEA1Q15075 1411 aa22.58■■□□□ 1.21
ARHGEF1-222ENST00000600517 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
ARHGEF1-222ENST00000600517 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
ARHGEF1-222ENST00000600517 PTPRGP23470 1445 aa22.52■■□□□ 1.2
ARHGEF1-222ENST00000600517 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
ARHGEF1-222ENST00000600517 UGGT2Q9NYU1 1516 aa22.51■■□□□ 1.19
ARHGEF1-222ENST00000600517 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
ARHGEF1-222ENST00000600517 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
ARHGEF1-222ENST00000600517 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
ARHGEF1-222ENST00000600517 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF1-222ENST00000600517 CTTNBP2Q8WZ74 1663 aa22.41■■□□□ 1.18
ARHGEF1-222ENST00000600517 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
ARHGEF1-222ENST00000600517 GOLGA3Q08378 1498 aa22.38■■□□□ 1.17
ARHGEF1-222ENST00000600517 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
ARHGEF1-222ENST00000600517 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
ARHGEF1-222ENST00000600517 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
ARHGEF1-222ENST00000600517 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
ARHGEF1-222ENST00000600517 KIF21BO75037 1637 aa22.3■■□□□ 1.16
ARHGEF1-222ENST00000600517 ABCC2Q92887 1545 aa22.3■■□□□ 1.16
ARHGEF1-222ENST00000600517 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
ARHGEF1-222ENST00000600517 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
ARHGEF1-222ENST00000600517 FAM69CQ0P6D2 419 aa22.24■■□□□ 1.15
ARHGEF1-222ENST00000600517 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
ARHGEF1-222ENST00000600517 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
ARHGEF1-222ENST00000600517 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
ARHGEF1-222ENST00000600517 SAMD9Q5K651 1589 aa22.19■■□□□ 1.14
ARHGEF1-222ENST00000600517 ASXL2Q76L83 1435 aa22.18■■□□□ 1.14
ARHGEF1-222ENST00000600517 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
ARHGEF1-222ENST00000600517 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
ARHGEF1-222ENST00000600517 ABCA8O94911 1581 aa22.17■■□□□ 1.14
ARHGEF1-222ENST00000600517 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
ARHGEF1-222ENST00000600517 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
ARHGEF1-222ENST00000600517 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
ARHGEF1-222ENST00000600517 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.13
ARHGEF1-222ENST00000600517 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
ARHGEF1-222ENST00000600517 GLI2P10070 1586 aa22.04■■□□□ 1.12
ARHGEF1-222ENST00000600517 EPRSP07814 1512 aaKnown RBP22.04■■□□□ 1.12
ARHGEF1-222ENST00000600517 ATP10BO94823 1461 aa22.03■■□□□ 1.12
ARHGEF1-222ENST00000600517 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
ARHGEF1-222ENST00000600517 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
ARHGEF1-222ENST00000600517 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
ARHGEF1-222ENST00000600517 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
ARHGEF1-222ENST00000600517 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
ARHGEF1-222ENST00000600517 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
ARHGEF1-222ENST00000600517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
ARHGEF1-222ENST00000600517 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
ARHGEF1-222ENST00000600517 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
ARHGEF1-222ENST00000600517 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
ARHGEF1-222ENST00000600517 TSPOAP1O95153 1857 aa21.9■■□□□ 1.1
ARHGEF1-222ENST00000600517 CD109Q6YHK3 1445 aa21.87■■□□□ 1.09
ARHGEF1-222ENST00000600517 PPRC1Q5VV67 1664 aaKnown RBP21.86■■□□□ 1.09
ARHGEF1-222ENST00000600517 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
ARHGEF1-222ENST00000600517 TEX14Q8IWB6 1497 aa21.84■■□□□ 1.09
ARHGEF1-222ENST00000600517 KDM6BO15054 1643 aa21.83■■□□□ 1.08
ARHGEF1-222ENST00000600517 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
ARHGEF1-222ENST00000600517 ATP1B4Q9UN42 357 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF1-222ENST00000600517 CLIP1P30622 1438 aa21.81■■□□□ 1.08
ARHGEF1-222ENST00000600517 CFAP43Q8NDM7 1665 aa21.8■■□□□ 1.08
ARHGEF1-222ENST00000600517 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF1-222ENST00000600517 CDK13Q14004 1512 aaKnown RBP21.76■■□□□ 1.07
ARHGEF1-222ENST00000600517 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
ARHGEF1-222ENST00000600517 HECW1Q76N89 1606 aa21.75■■□□□ 1.07
ARHGEF1-222ENST00000600517 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF1-222ENST00000600517 CASKIN1Q8WXD9 1431 aa21.73■■□□□ 1.07
ARHGEF1-222ENST00000600517 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
ARHGEF1-222ENST00000600517 PHLDB1Q86UU1 1377 aa21.7■■□□□ 1.06
ARHGEF1-222ENST00000600517 CEP162Q5TB80 1403 aa21.66■■□□□ 1.06
ARHGEF1-222ENST00000600517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
ARHGEF1-222ENST00000600517 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
ARHGEF1-222ENST00000600517 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
ARHGEF1-222ENST00000600517 NEO1Q92859 1461 aa21.64■■□□□ 1.05
ARHGEF1-222ENST00000600517 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
ARHGEF1-222ENST00000600517 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
ARHGEF1-222ENST00000600517 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
ARHGEF1-222ENST00000600517 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
ARHGEF1-222ENST00000600517 TTC37Q6PGP7 1564 aa21.58■■□□□ 1.05
ARHGEF1-222ENST00000600517 PLCH2O75038 1416 aa21.58■■□□□ 1.05
ARHGEF1-222ENST00000600517 RAPGEF3O95398 923 aa21.56■■□□□ 1.04
ARHGEF1-222ENST00000600517 FANCAO15360 1455 aa21.56■■□□□ 1.04
ARHGEF1-222ENST00000600517 AKNAQ7Z591 1439 aa21.55■■□□□ 1.04
ARHGEF1-222ENST00000600517 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
ARHGEF1-222ENST00000600517 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
ARHGEF1-222ENST00000600517 KIF14Q15058 1648 aa21.51■■□□□ 1.03
ARHGEF1-222ENST00000600517 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
ARHGEF1-222ENST00000600517 DENND4BO75064 1496 aaPredicted RBP21.49■■□□□ 1.03
ARHGEF1-222ENST00000600517 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
ARHGEF1-222ENST00000600517 SCAPERQ9BY12 1400 aa21.44■■□□□ 1.02
ARHGEF1-222ENST00000600517 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
ARHGEF1-222ENST00000600517 FRMPD1Q5SYB0 1578 aa21.43■■□□□ 1.02
ARHGEF1-222ENST00000600517 MYO5CQ9NQX4 1742 aa21.43■■□□□ 1.02
ARHGEF1-222ENST00000600517 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
ARHGEF1-222ENST00000600517 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms