RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CUL7Q14999 1698 aa27.29■■□□□ 1.96
VRK3-221ENST00000600284 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
VRK3-221ENST00000600284 KIAA0586Q9BVV6 1533 aa27.22■■□□□ 1.95
VRK3-221ENST00000600284 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
VRK3-221ENST00000600284 NPM1P06748 294 aaKnown RBP eCLIP26.99■■□□□ 1.91
VRK3-221ENST00000600284 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
VRK3-221ENST00000600284 CARMIL2Q6F5E8 1435 aa26.96■■□□□ 1.91
VRK3-221ENST00000600284 IQGAP2Q13576 1575 aa26.94■■□□□ 1.9
VRK3-221ENST00000600284 PTPRGP23470 1445 aa26.92■■□□□ 1.9
VRK3-221ENST00000600284 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
VRK3-221ENST00000600284 ADCY10Q96PN6 1610 aa26.89■■□□□ 1.9
VRK3-221ENST00000600284 MAPKBP1O60336 1514 aa26.87■■□□□ 1.89
VRK3-221ENST00000600284 ABCC10Q5T3U5 1492 aa26.82■■□□□ 1.88
VRK3-221ENST00000600284 UGGT2Q9NYU1 1516 aa26.81■■□□□ 1.88
VRK3-221ENST00000600284 DISP1Q96F81 1524 aa26.8■■□□□ 1.88
VRK3-221ENST00000600284 FAM69CQ0P6D2 419 aa26.8■■□□□ 1.88
VRK3-221ENST00000600284 KIF13AQ9H1H9 1805 aa26.8■■□□□ 1.88
VRK3-221ENST00000600284 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
VRK3-221ENST00000600284 TTBK1Q5TCY1 1321 aaPredicted RBP26.77■■□□□ 1.88
VRK3-221ENST00000600284 UHRF1BP1LA0JNW5 1464 aa26.74■■□□□ 1.87
VRK3-221ENST00000600284 ABCC2Q92887 1545 aa26.73■■□□□ 1.87
VRK3-221ENST00000600284 UACAQ9BZF9 1416 aa26.72■■□□□ 1.87
VRK3-221ENST00000600284 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
VRK3-221ENST00000600284 KIAA0556O60303 1618 aa26.68■■□□□ 1.86
VRK3-221ENST00000600284 CTTNBP2Q8WZ74 1663 aa26.66■■□□□ 1.86
VRK3-221ENST00000600284 CSRNP3Q8WYN3 585 aa26.66■■□□□ 1.86
VRK3-221ENST00000600284 GOLGA3Q08378 1498 aa26.64■■□□□ 1.86
VRK3-221ENST00000600284 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
VRK3-221ENST00000600284 EEA1Q15075 1411 aa26.6■■□□□ 1.85
VRK3-221ENST00000600284 ASXL2Q76L83 1435 aa26.6■■□□□ 1.85
VRK3-221ENST00000600284 KDM5BQ9UGL1 1544 aa26.6■■□□□ 1.85
VRK3-221ENST00000600284 GLI2P10070 1586 aa26.52■■□□□ 1.84
VRK3-221ENST00000600284 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
VRK3-221ENST00000600284 ZCCHC11Q5TAX3 1644 aaKnown RBP26.47■■□□□ 1.83
VRK3-221ENST00000600284 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
VRK3-221ENST00000600284 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
VRK3-221ENST00000600284 ABCA8O94911 1581 aa26.44■■□□□ 1.82
VRK3-221ENST00000600284 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
VRK3-221ENST00000600284 KDM6BO15054 1643 aa26.42■■□□□ 1.82
VRK3-221ENST00000600284 WDR7Q9Y4E6 1490 aa26.38■■□□□ 1.81
VRK3-221ENST00000600284 P3H3Q8IVL6 736 aa26.37■■□□□ 1.81
VRK3-221ENST00000600284 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
VRK3-221ENST00000600284 SAMD9Q5K651 1589 aa26.34■■□□□ 1.81
VRK3-221ENST00000600284 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
VRK3-221ENST00000600284 MAP3K4Q9Y6R4 1608 aa26.33■■□□□ 1.81
VRK3-221ENST00000600284 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
VRK3-221ENST00000600284 KIF21BO75037 1637 aa26.29■■□□□ 1.8
VRK3-221ENST00000600284 KCNH8Q96L42 1107 aa26.25■■□□□ 1.79
VRK3-221ENST00000600284 ATP10BO94823 1461 aa26.24■■□□□ 1.79
VRK3-221ENST00000600284 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
VRK3-221ENST00000600284 MAGI3Q5TCQ9 1506 aa26.2■■□□□ 1.79
VRK3-221ENST00000600284 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
VRK3-221ENST00000600284 RAPGEF6Q8TEU7 1601 aa26.19■■□□□ 1.78
VRK3-221ENST00000600284 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
VRK3-221ENST00000600284 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
VRK3-221ENST00000600284 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
VRK3-221ENST00000600284 FHOD3Q2V2M9 1422 aa26.16■■□□□ 1.78
VRK3-221ENST00000600284 EFCAB5A4FU69 1503 aa26.16■■□□□ 1.78
VRK3-221ENST00000600284 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
VRK3-221ENST00000600284 NUP153P49790 1475 aaKnown RBP26.11■■□□□ 1.77
VRK3-221ENST00000600284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
VRK3-221ENST00000600284 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
VRK3-221ENST00000600284 KDM4FA0A1W2PPD8 638 aa26.09■■□□□ 1.77
VRK3-221ENST00000600284 ABCA9Q8IUA7 1624 aa26.04■■□□□ 1.76
VRK3-221ENST00000600284 PLEKHD1A6NEE1 506 aa26.03■■□□□ 1.76
VRK3-221ENST00000600284 PHLDB1Q86UU1 1377 aa26.03■■□□□ 1.76
VRK3-221ENST00000600284 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
VRK3-221ENST00000600284 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
VRK3-221ENST00000600284 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
VRK3-221ENST00000600284 ARHGAP35Q9NRY4 1499 aa25.94■■□□□ 1.74
VRK3-221ENST00000600284 NEO1Q92859 1461 aa25.93■■□□□ 1.74
VRK3-221ENST00000600284 ADGRL1O94910 1474 aa25.91■■□□□ 1.74
VRK3-221ENST00000600284 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
VRK3-221ENST00000600284 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
VRK3-221ENST00000600284 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
VRK3-221ENST00000600284 HECW1Q76N89 1606 aa25.83■■□□□ 1.73
VRK3-221ENST00000600284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.82■■□□□ 1.72
VRK3-221ENST00000600284 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
VRK3-221ENST00000600284 AKNAQ7Z591 1439 aa25.77■■□□□ 1.72
VRK3-221ENST00000600284 FANCAO15360 1455 aa25.77■■□□□ 1.72
VRK3-221ENST00000600284 CFAP74Q9C0B2 1584 aa25.74■■□□□ 1.71
VRK3-221ENST00000600284 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
VRK3-221ENST00000600284 DENND4BO75064 1496 aaPredicted RBP25.73■■□□□ 1.71
VRK3-221ENST00000600284 PLCH2O75038 1416 aa25.72■■□□□ 1.71
VRK3-221ENST00000600284 FRMPD1Q5SYB0 1578 aa25.69■■□□□ 1.7
VRK3-221ENST00000600284 TROQ12816 1431 aaPredicted RBP25.69■■□□□ 1.7
VRK3-221ENST00000600284 CASKIN1Q8WXD9 1431 aa25.69■■□□□ 1.7
VRK3-221ENST00000600284 CLIP1P30622 1438 aa25.66■■□□□ 1.7
VRK3-221ENST00000600284 EFCAB2Q5VUJ9 269 aa25.64■■□□□ 1.7
VRK3-221ENST00000600284 CCDC18Q5T9S5 1454 aa25.64■■□□□ 1.69
VRK3-221ENST00000600284 RICTORQ6R327 1708 aa25.63■■□□□ 1.69
VRK3-221ENST00000600284 KIF14Q15058 1648 aa25.62■■□□□ 1.69
VRK3-221ENST00000600284 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
VRK3-221ENST00000600284 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
VRK3-221ENST00000600284 PCF11O94913 1555 aaKnown RBP25.59■■□□□ 1.69
VRK3-221ENST00000600284 MAGI2Q86UL8 1455 aa25.59■■□□□ 1.69
VRK3-221ENST00000600284 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.69
VRK3-221ENST00000600284 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
VRK3-221ENST00000600284 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
VRK3-221ENST00000600284 ARID4BQ4LE39 1312 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms