RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 KIF27Q86VH2 1401 aa32.95■■■□□ 2.87
FARP1-229ENST00000600190 AEBP2Q6ZN18 517 aaPredicted RBP32.94■■■□□ 2.86
FARP1-229ENST00000600190 NPM1P06748 294 aaKnown RBP eCLIP32.87■■■□□ 2.85
FARP1-229ENST00000600190 KIF13AQ9H1H9 1805 aa32.86■■■□□ 2.85
FARP1-229ENST00000600190 CUL7Q14999 1698 aa32.86■■■□□ 2.85
FARP1-229ENST00000600190 KIAA0586Q9BVV6 1533 aa32.86■■■□□ 2.85
FARP1-229ENST00000600190 FAM69CQ0P6D2 419 aa32.77■■■□□ 2.84
FARP1-229ENST00000600190 CARMIL1Q5VZK9 1371 aa32.74■■■□□ 2.83
FARP1-229ENST00000600190 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
FARP1-229ENST00000600190 ABCC10Q5T3U5 1492 aa32.72■■■□□ 2.83
FARP1-229ENST00000600190 MAPKBP1O60336 1514 aa32.7■■■□□ 2.83
FARP1-229ENST00000600190 TTBK1Q5TCY1 1321 aaPredicted RBP32.67■■■□□ 2.82
FARP1-229ENST00000600190 PTPRGP23470 1445 aa32.62■■■□□ 2.81
FARP1-229ENST00000600190 DIP2BQ9P265 1576 aa32.62■■■□□ 2.81
FARP1-229ENST00000600190 CARMIL2Q6F5E8 1435 aa32.57■■■□□ 2.8
FARP1-229ENST00000600190 TNIKQ9UKE5 1360 aa32.53■■■□□ 2.8
FARP1-229ENST00000600190 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
FARP1-229ENST00000600190 TSPOAP1O95153 1857 aa32.46■■■□□ 2.79
FARP1-229ENST00000600190 ABCC2Q92887 1545 aa32.42■■■□□ 2.78
FARP1-229ENST00000600190 RAPGEF2Q9Y4G8 1499 aa32.42■■■□□ 2.78
FARP1-229ENST00000600190 KDM6BO15054 1643 aa32.4■■■□□ 2.78
FARP1-229ENST00000600190 DISP1Q96F81 1524 aa32.38■■■□□ 2.77
FARP1-229ENST00000600190 ASXL2Q76L83 1435 aa32.34■■■□□ 2.77
FARP1-229ENST00000600190 UACAQ9BZF9 1416 aa32.34■■■□□ 2.77
FARP1-229ENST00000600190 UHRF1BP1LA0JNW5 1464 aa32.34■■■□□ 2.77
FARP1-229ENST00000600190 PLB1Q6P1J6 1458 aa32.31■■■□□ 2.76
FARP1-229ENST00000600190 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
FARP1-229ENST00000600190 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
FARP1-229ENST00000600190 GLI2P10070 1586 aa32.22■■■□□ 2.75
FARP1-229ENST00000600190 KDM5BQ9UGL1 1544 aa32.2■■■□□ 2.74
FARP1-229ENST00000600190 PPRC1Q5VV67 1664 aaKnown RBP32.16■■■□□ 2.74
FARP1-229ENST00000600190 KDM4FA0A1W2PPD8 638 aa32.16■■■□□ 2.74
FARP1-229ENST00000600190 ZCCHC11Q5TAX3 1644 aaKnown RBP32.15■■■□□ 2.74
FARP1-229ENST00000600190 EPRSP07814 1512 aaKnown RBP32.14■■■□□ 2.74
FARP1-229ENST00000600190 CTTNBP2Q8WZ74 1663 aa32.14■■■□□ 2.74
FARP1-229ENST00000600190 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
FARP1-229ENST00000600190 MAP3K4Q9Y6R4 1608 aa32.05■■■□□ 2.72
FARP1-229ENST00000600190 PRXQ9BXM0 1461 aa32.03■■■□□ 2.72
FARP1-229ENST00000600190 TEX14Q8IWB6 1497 aa31.99■■■□□ 2.71
FARP1-229ENST00000600190 WDR7Q9Y4E6 1490 aa31.99■■■□□ 2.71
FARP1-229ENST00000600190 COL17A1Q9UMD9 1497 aaPredicted RBP31.98■■■□□ 2.71
FARP1-229ENST00000600190 KCNH8Q96L42 1107 aa31.94■■■□□ 2.7
FARP1-229ENST00000600190 ABCA8O94911 1581 aa31.94■■■□□ 2.7
FARP1-229ENST00000600190 P3H3Q8IVL6 736 aa31.88■■■□□ 2.69
FARP1-229ENST00000600190 FAM9AQ8IZU1 332 aaPredicted RBP31.87■■■□□ 2.69
FARP1-229ENST00000600190 ADGRL1O94910 1474 aa31.84■■■□□ 2.69
FARP1-229ENST00000600190 CD109Q6YHK3 1445 aa31.84■■■□□ 2.69
FARP1-229ENST00000600190 ARID3CA6NKF2 412 aa31.82■■■□□ 2.68
FARP1-229ENST00000600190 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
FARP1-229ENST00000600190 CFAP43Q8NDM7 1665 aa31.8■■■□□ 2.68
FARP1-229ENST00000600190 MAGI3Q5TCQ9 1506 aa31.78■■■□□ 2.68
FARP1-229ENST00000600190 ATP10BO94823 1461 aa31.71■■■□□ 2.67
FARP1-229ENST00000600190 SAMD9Q5K651 1589 aa31.66■■■□□ 2.66
FARP1-229ENST00000600190 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
FARP1-229ENST00000600190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.62■■■□□ 2.65
FARP1-229ENST00000600190 HNRNPUL2Q1KMD3 747 aaKnown RBP31.62■■■□□ 2.65
FARP1-229ENST00000600190 EEA1Q15075 1411 aa31.59■■■□□ 2.65
FARP1-229ENST00000600190 RAPGEF6Q8TEU7 1601 aa31.59■■■□□ 2.65
FARP1-229ENST00000600190 ARAP3Q8WWN8 1544 aa31.54■■■□□ 2.64
FARP1-229ENST00000600190 ABCA9Q8IUA7 1624 aa31.53■■■□□ 2.64
FARP1-229ENST00000600190 FHOD3Q2V2M9 1422 aa31.5■■■□□ 2.63
FARP1-229ENST00000600190 KIF21BO75037 1637 aa31.48■■■□□ 2.63
FARP1-229ENST00000600190 NUP153P49790 1475 aaKnown RBP31.47■■■□□ 2.63
FARP1-229ENST00000600190 PHLDB1Q86UU1 1377 aa31.47■■■□□ 2.63
FARP1-229ENST00000600190 HECW2Q9P2P5 1572 aa31.43■■■□□ 2.62
FARP1-229ENST00000600190 RAPGEF3O95398 923 aa31.43■■■□□ 2.62
FARP1-229ENST00000600190 NEO1Q92859 1461 aa31.4■■■□□ 2.62
FARP1-229ENST00000600190 PLEKHD1A6NEE1 506 aa31.39■■■□□ 2.62
FARP1-229ENST00000600190 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
FARP1-229ENST00000600190 EFCAB5A4FU69 1503 aa31.33■■■□□ 2.61
FARP1-229ENST00000600190 ILDR1Q86SU0 546 aaPredicted RBP31.32■■■□□ 2.6
FARP1-229ENST00000600190 UBTFP17480 764 aaKnown RBP31.26■■■□□ 2.59
FARP1-229ENST00000600190 FRMPD1Q5SYB0 1578 aa31.26■■■□□ 2.59
FARP1-229ENST00000600190 ARID4BQ4LE39 1312 aaPredicted RBP31.24■■■□□ 2.59
FARP1-229ENST00000600190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.22■■■□□ 2.59
FARP1-229ENST00000600190 AKNAQ7Z591 1439 aa31.21■■■□□ 2.59
FARP1-229ENST00000600190 ADAMTSL3P82987 1691 aa31.2■■■□□ 2.59
FARP1-229ENST00000600190 FANCAO15360 1455 aa31.2■■■□□ 2.58
FARP1-229ENST00000600190 DENND4BO75064 1496 aaPredicted RBP31.2■■■□□ 2.58
FARP1-229ENST00000600190 ATP1B4Q9UN42 357 aaPredicted RBP31.19■■■□□ 2.58
FARP1-229ENST00000600190 PTPRMP28827 1452 aa31.18■■■□□ 2.58
FARP1-229ENST00000600190 CDK13Q14004 1512 aaKnown RBP31.18■■■□□ 2.58
FARP1-229ENST00000600190 TTC37Q6PGP7 1564 aa31.17■■■□□ 2.58
FARP1-229ENST00000600190 CFAP74Q9C0B2 1584 aa31.15■■■□□ 2.58
FARP1-229ENST00000600190 BCORL1Q5H9F3 1711 aa31.14■■■□□ 2.58
FARP1-229ENST00000600190 RICTORQ6R327 1708 aa31.14■■■□□ 2.58
FARP1-229ENST00000600190 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
FARP1-229ENST00000600190 ARHGEF40Q8TER5 1519 aa31.09■■■□□ 2.57
FARP1-229ENST00000600190 FMN1Q68DA7 1419 aa31.09■■■□□ 2.57
FARP1-229ENST00000600190 MADDQ8WXG6 1647 aa31.09■■■□□ 2.57
FARP1-229ENST00000600190 ARHGAP35Q9NRY4 1499 aa31.06■■■□□ 2.56
FARP1-229ENST00000600190 HECW1Q76N89 1606 aa31.04■■■□□ 2.56
FARP1-229ENST00000600190 PLCH2O75038 1416 aa31.03■■■□□ 2.56
FARP1-229ENST00000600190 CDK11AQ9UQ88 783 aaPredicted RBP31.02■■■□□ 2.56
FARP1-229ENST00000600190 ZMYM4Q5VZL5 1548 aa31■■■□□ 2.55
FARP1-229ENST00000600190 SCAPERQ9BY12 1400 aa30.99■■■□□ 2.55
FARP1-229ENST00000600190 YEATS2Q9ULM3 1422 aa30.99■■■□□ 2.55
FARP1-229ENST00000600190 ZFYVE16Q7Z3T8 1539 aa30.99■■■□□ 2.55
FARP1-229ENST00000600190 RIMS1Q86UR5 1692 aaKnown RBP30.97■■■□□ 2.55
FARP1-229ENST00000600190 POGZQ7Z3K3 1410 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms