RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 RUSC2Q8N2Y8 1516 aa24.07■■□□□ 1.44
IRF3-225ENST00000600022 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
IRF3-225ENST00000600022 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
IRF3-225ENST00000600022 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
IRF3-225ENST00000600022 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
IRF3-225ENST00000600022 KIAA0586Q9BVV6 1533 aa23.97■■□□□ 1.43
IRF3-225ENST00000600022 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
IRF3-225ENST00000600022 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
IRF3-225ENST00000600022 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
IRF3-225ENST00000600022 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
IRF3-225ENST00000600022 MAPKBP1O60336 1514 aa23.87■■□□□ 1.41
IRF3-225ENST00000600022 CUL7Q14999 1698 aa23.86■■□□□ 1.41
IRF3-225ENST00000600022 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
IRF3-225ENST00000600022 PTPRGP23470 1445 aa23.83■■□□□ 1.4
IRF3-225ENST00000600022 TNIKQ9UKE5 1360 aa23.74■■□□□ 1.39
IRF3-225ENST00000600022 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
IRF3-225ENST00000600022 CARMIL2Q6F5E8 1435 aa23.69■■□□□ 1.38
IRF3-225ENST00000600022 KDM4FA0A1W2PPD8 638 aa23.69■■□□□ 1.38
IRF3-225ENST00000600022 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
IRF3-225ENST00000600022 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
IRF3-225ENST00000600022 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
IRF3-225ENST00000600022 KDM6BO15054 1643 aa23.66■■□□□ 1.38
IRF3-225ENST00000600022 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
IRF3-225ENST00000600022 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
IRF3-225ENST00000600022 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
IRF3-225ENST00000600022 UHRF1BP1LA0JNW5 1464 aa23.59■■□□□ 1.37
IRF3-225ENST00000600022 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
IRF3-225ENST00000600022 PPRC1Q5VV67 1664 aaKnown RBP23.54■■□□□ 1.36
IRF3-225ENST00000600022 UGGT2Q9NYU1 1516 aa23.54■■□□□ 1.36
IRF3-225ENST00000600022 COL17A1Q9UMD9 1497 aaPredicted RBP23.53■■□□□ 1.36
IRF3-225ENST00000600022 GLI2P10070 1586 aa23.52■■□□□ 1.36
IRF3-225ENST00000600022 KDM5BQ9UGL1 1544 aa23.51■■□□□ 1.35
IRF3-225ENST00000600022 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
IRF3-225ENST00000600022 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
IRF3-225ENST00000600022 ZCCHC11Q5TAX3 1644 aaKnown RBP23.45■■□□□ 1.34
IRF3-225ENST00000600022 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
IRF3-225ENST00000600022 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
IRF3-225ENST00000600022 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
IRF3-225ENST00000600022 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
IRF3-225ENST00000600022 WDR7Q9Y4E6 1490 aa23.34■■□□□ 1.33
IRF3-225ENST00000600022 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
IRF3-225ENST00000600022 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
IRF3-225ENST00000600022 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
IRF3-225ENST00000600022 ABCA8O94911 1581 aa23.31■■□□□ 1.32
IRF3-225ENST00000600022 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
IRF3-225ENST00000600022 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
IRF3-225ENST00000600022 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
IRF3-225ENST00000600022 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
IRF3-225ENST00000600022 ATP10BO94823 1461 aa23.19■■□□□ 1.3
IRF3-225ENST00000600022 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
IRF3-225ENST00000600022 RANGAP1P46060 587 aaPredicted RBP23.15■■□□□ 1.3
IRF3-225ENST00000600022 CFAP43Q8NDM7 1665 aa23.14■■□□□ 1.29
IRF3-225ENST00000600022 ILDR1Q86SU0 546 aaPredicted RBP23.12■■□□□ 1.29
IRF3-225ENST00000600022 FAM9AQ8IZU1 332 aaPredicted RBP23.07■■□□□ 1.28
IRF3-225ENST00000600022 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
IRF3-225ENST00000600022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
IRF3-225ENST00000600022 RAPGEF3O95398 923 aa23.05■■□□□ 1.28
IRF3-225ENST00000600022 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
IRF3-225ENST00000600022 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
IRF3-225ENST00000600022 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
IRF3-225ENST00000600022 KIF21BO75037 1637 aa23.01■■□□□ 1.27
IRF3-225ENST00000600022 FHOD3Q2V2M9 1422 aa22.99■■□□□ 1.27
IRF3-225ENST00000600022 ABCA9Q8IUA7 1624 aa22.99■■□□□ 1.27
IRF3-225ENST00000600022 RAPGEF6Q8TEU7 1601 aa22.99■■□□□ 1.27
IRF3-225ENST00000600022 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
IRF3-225ENST00000600022 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
IRF3-225ENST00000600022 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.26
IRF3-225ENST00000600022 NEO1Q92859 1461 aa22.88■■□□□ 1.25
IRF3-225ENST00000600022 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
IRF3-225ENST00000600022 EEA1Q15075 1411 aa22.87■■□□□ 1.25
IRF3-225ENST00000600022 FRMPD1Q5SYB0 1578 aa22.87■■□□□ 1.25
IRF3-225ENST00000600022 PTPRMP28827 1452 aa22.83■■□□□ 1.25
IRF3-225ENST00000600022 ADAMTSL3P82987 1691 aa22.83■■□□□ 1.24
IRF3-225ENST00000600022 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
IRF3-225ENST00000600022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.79■■□□□ 1.243e-7■□□□□ 11.1
IRF3-225ENST00000600022 AKNAQ7Z591 1439 aa22.79■■□□□ 1.24
IRF3-225ENST00000600022 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
IRF3-225ENST00000600022 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
IRF3-225ENST00000600022 FANCAO15360 1455 aa22.75■■□□□ 1.23
IRF3-225ENST00000600022 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
IRF3-225ENST00000600022 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
IRF3-225ENST00000600022 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
IRF3-225ENST00000600022 TTC37Q6PGP7 1564 aa22.74■■□□□ 1.23
IRF3-225ENST00000600022 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
IRF3-225ENST00000600022 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
IRF3-225ENST00000600022 EFCAB5A4FU69 1503 aa22.72■■□□□ 1.23
IRF3-225ENST00000600022 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
IRF3-225ENST00000600022 YEATS2Q9ULM3 1422 aa22.71■■□□□ 1.23
IRF3-225ENST00000600022 SIGLEC1Q9BZZ2 1709 aa22.68■■□□□ 1.22
IRF3-225ENST00000600022 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
IRF3-225ENST00000600022 ARHGEF40Q8TER5 1519 aa22.67■■□□□ 1.22
IRF3-225ENST00000600022 MLECQ14165 292 aa22.66■■□□□ 1.22
IRF3-225ENST00000600022 ARHGAP35Q9NRY4 1499 aa22.65■■□□□ 1.22
IRF3-225ENST00000600022 PLCH2O75038 1416 aa22.65■■□□□ 1.22
IRF3-225ENST00000600022 SCAPERQ9BY12 1400 aa22.65■■□□□ 1.22
IRF3-225ENST00000600022 HSPA2P54652 639 aa22.64■■□□□ 1.21
IRF3-225ENST00000600022 RIMS1Q86UR5 1692 aaKnown RBP22.63■■□□□ 1.21
IRF3-225ENST00000600022 LMTK3Q96Q04 1460 aa22.63■■□□□ 1.21
IRF3-225ENST00000600022 HECW1Q76N89 1606 aa22.61■■□□□ 1.21
IRF3-225ENST00000600022 ZMYM4Q5VZL5 1548 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms