RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 JPH4Q96JJ6 628 aa25.89■■□□□ 1.74
IRF3-223ENST00000599223 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
IRF3-223ENST00000599223 IGF1RP08069 1367 aa25.87■■□□□ 1.73
IRF3-223ENST00000599223 ADCY10Q96PN6 1610 aa25.82■■□□□ 1.72
IRF3-223ENST00000599223 KIAA0586Q9BVV6 1533 aa25.82■■□□□ 1.72
IRF3-223ENST00000599223 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
IRF3-223ENST00000599223 DIP2BQ9P265 1576 aa25.7■■□□□ 1.71
IRF3-223ENST00000599223 CARMIL1Q5VZK9 1371 aa25.68■■□□□ 1.7
IRF3-223ENST00000599223 ABCC10Q5T3U5 1492 aa25.67■■□□□ 1.7
IRF3-223ENST00000599223 IQGAP2Q13576 1575 aa25.63■■□□□ 1.69
IRF3-223ENST00000599223 FAM69CQ0P6D2 419 aa25.56■■□□□ 1.68
IRF3-223ENST00000599223 PTPRGP23470 1445 aa25.54■■□□□ 1.68
IRF3-223ENST00000599223 NPM1P06748 294 aaKnown RBP eCLIP25.53■■□□□ 1.68
IRF3-223ENST00000599223 TSPOAP1O95153 1857 aa25.52■■□□□ 1.68
IRF3-223ENST00000599223 DISP1Q96F81 1524 aa25.52■■□□□ 1.68
IRF3-223ENST00000599223 TNIKQ9UKE5 1360 aa25.5■■□□□ 1.67
IRF3-223ENST00000599223 CARMIL2Q6F5E8 1435 aa25.49■■□□□ 1.67
IRF3-223ENST00000599223 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
IRF3-223ENST00000599223 ABCC2Q92887 1545 aa25.48■■□□□ 1.67
IRF3-223ENST00000599223 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
IRF3-223ENST00000599223 TTBK1Q5TCY1 1321 aaPredicted RBP25.47■■□□□ 1.67
IRF3-223ENST00000599223 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
IRF3-223ENST00000599223 KDM6BO15054 1643 aa25.44■■□□□ 1.66
IRF3-223ENST00000599223 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
IRF3-223ENST00000599223 UHRF1BP1LA0JNW5 1464 aa25.42■■□□□ 1.66
IRF3-223ENST00000599223 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
IRF3-223ENST00000599223 PPRC1Q5VV67 1664 aaKnown RBP25.4■■□□□ 1.66
IRF3-223ENST00000599223 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
IRF3-223ENST00000599223 UACAQ9BZF9 1416 aa25.37■■□□□ 1.65
IRF3-223ENST00000599223 GLI2P10070 1586 aa25.35■■□□□ 1.65
IRF3-223ENST00000599223 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
IRF3-223ENST00000599223 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
IRF3-223ENST00000599223 KDM5BQ9UGL1 1544 aa25.32■■□□□ 1.64
IRF3-223ENST00000599223 MAP3K4Q9Y6R4 1608 aa25.26■■□□□ 1.63
IRF3-223ENST00000599223 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
IRF3-223ENST00000599223 EPRSP07814 1512 aaKnown RBP25.25■■□□□ 1.63
IRF3-223ENST00000599223 ABCA8O94911 1581 aa25.18■■□□□ 1.62
IRF3-223ENST00000599223 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
IRF3-223ENST00000599223 WDR7Q9Y4E6 1490 aa25.15■■□□□ 1.62
IRF3-223ENST00000599223 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
IRF3-223ENST00000599223 KDM4FA0A1W2PPD8 638 aa25.13■■□□□ 1.61
IRF3-223ENST00000599223 TEX14Q8IWB6 1497 aa25.07■■□□□ 1.6
IRF3-223ENST00000599223 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
IRF3-223ENST00000599223 SAMD9Q5K651 1589 aa25.03■■□□□ 1.6
IRF3-223ENST00000599223 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
IRF3-223ENST00000599223 MAGI3Q5TCQ9 1506 aa24.96■■□□□ 1.59
IRF3-223ENST00000599223 CD109Q6YHK3 1445 aa24.94■■□□□ 1.58
IRF3-223ENST00000599223 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
IRF3-223ENST00000599223 ATP10BO94823 1461 aa24.91■■□□□ 1.58
IRF3-223ENST00000599223 CSRNP3Q8WYN3 585 aa24.91■■□□□ 1.58
IRF3-223ENST00000599223 RAPGEF6Q8TEU7 1601 aa24.9■■□□□ 1.58
IRF3-223ENST00000599223 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
IRF3-223ENST00000599223 KCNH8Q96L42 1107 aa24.89■■□□□ 1.58
IRF3-223ENST00000599223 ABCA9Q8IUA7 1624 aa24.86■■□□□ 1.57
IRF3-223ENST00000599223 EEA1Q15075 1411 aa24.86■■□□□ 1.57
IRF3-223ENST00000599223 KIF21BO75037 1637 aa24.81■■□□□ 1.56
IRF3-223ENST00000599223 NUP153P49790 1475 aaKnown RBP24.81■■□□□ 1.56
IRF3-223ENST00000599223 FHOD3Q2V2M9 1422 aa24.8■■□□□ 1.56
IRF3-223ENST00000599223 ARAP3Q8WWN8 1544 aa24.77■■□□□ 1.56
IRF3-223ENST00000599223 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
IRF3-223ENST00000599223 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
IRF3-223ENST00000599223 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
IRF3-223ENST00000599223 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
IRF3-223ENST00000599223 HECW2Q9P2P5 1572 aa24.7■■□□□ 1.54
IRF3-223ENST00000599223 NEO1Q92859 1461 aa24.64■■□□□ 1.54
IRF3-223ENST00000599223 TTC37Q6PGP7 1564 aa24.62■■□□□ 1.53
IRF3-223ENST00000599223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.61■■□□□ 1.53
IRF3-223ENST00000599223 HNRNPUL2Q1KMD3 747 aaKnown RBP24.61■■□□□ 1.53
IRF3-223ENST00000599223 CDK13Q14004 1512 aaKnown RBP24.6■■□□□ 1.53
IRF3-223ENST00000599223 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
IRF3-223ENST00000599223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.59■■□□□ 1.533e-7■□□□□ 11.1
IRF3-223ENST00000599223 RICTORQ6R327 1708 aa24.58■■□□□ 1.52
IRF3-223ENST00000599223 RAPGEF3O95398 923 aa24.57■■□□□ 1.52
IRF3-223ENST00000599223 ADAMTSL3P82987 1691 aa24.56■■□□□ 1.52
IRF3-223ENST00000599223 ARHGEF40Q8TER5 1519 aa24.54■■□□□ 1.52
IRF3-223ENST00000599223 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
IRF3-223ENST00000599223 EHMT2Q96KQ7 1210 aa24.51■■□□□ 1.51
IRF3-223ENST00000599223 BCORL1Q5H9F3 1711 aa24.51■■□□□ 1.51
IRF3-223ENST00000599223 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
IRF3-223ENST00000599223 FANCAO15360 1455 aa24.5■■□□□ 1.51
IRF3-223ENST00000599223 HECW1Q76N89 1606 aa24.48■■□□□ 1.51
IRF3-223ENST00000599223 MADDQ8WXG6 1647 aa24.48■■□□□ 1.51
IRF3-223ENST00000599223 PLEKHD1A6NEE1 506 aa24.47■■□□□ 1.51
IRF3-223ENST00000599223 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
IRF3-223ENST00000599223 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
IRF3-223ENST00000599223 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
IRF3-223ENST00000599223 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.51
IRF3-223ENST00000599223 DENND4BO75064 1496 aaPredicted RBP24.45■■□□□ 1.51
IRF3-223ENST00000599223 PTPRMP28827 1452 aa24.45■■□□□ 1.51
IRF3-223ENST00000599223 LRRIQ1Q96JM4 1722 aa24.45■■□□□ 1.5
IRF3-223ENST00000599223 KIF14Q15058 1648 aa24.43■■□□□ 1.5
IRF3-223ENST00000599223 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
IRF3-223ENST00000599223 FMN1Q68DA7 1419 aa24.41■■□□□ 1.5
IRF3-223ENST00000599223 MYO5CQ9NQX4 1742 aa24.39■■□□□ 1.5
IRF3-223ENST00000599223 RIMS1Q86UR5 1692 aaKnown RBP24.38■■□□□ 1.49
IRF3-223ENST00000599223 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
IRF3-223ENST00000599223 ZFYVE16Q7Z3T8 1539 aa24.37■■□□□ 1.49
IRF3-223ENST00000599223 ILDR1Q86SU0 546 aaPredicted RBP24.36■■□□□ 1.49
IRF3-223ENST00000599223 PLCH2O75038 1416 aa24.35■■□□□ 1.49
IRF3-223ENST00000599223 POGZQ7Z3K3 1410 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms