RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
VRK3-215ENST00000599138 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
VRK3-215ENST00000599138 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
VRK3-215ENST00000599138 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
VRK3-215ENST00000599138 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
VRK3-215ENST00000599138 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
VRK3-215ENST00000599138 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
VRK3-215ENST00000599138 EEA1Q15075 1411 aa16.35■□□□□ 0.21
VRK3-215ENST00000599138 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
VRK3-215ENST00000599138 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
VRK3-215ENST00000599138 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
VRK3-215ENST00000599138 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
VRK3-215ENST00000599138 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
VRK3-215ENST00000599138 TNIKQ9UKE5 1360 aa16.29■□□□□ 0.2
VRK3-215ENST00000599138 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
VRK3-215ENST00000599138 PTPRGP23470 1445 aa16.28■□□□□ 0.2
VRK3-215ENST00000599138 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
VRK3-215ENST00000599138 KIAA0556O60303 1618 aa16.24■□□□□ 0.19
VRK3-215ENST00000599138 MAPKBP1O60336 1514 aa16.2■□□□□ 0.18
VRK3-215ENST00000599138 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
VRK3-215ENST00000599138 UHRF1BP1LA0JNW5 1464 aa16.2■□□□□ 0.18
VRK3-215ENST00000599138 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
VRK3-215ENST00000599138 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
VRK3-215ENST00000599138 KIF21BO75037 1637 aa16.19■□□□□ 0.18
VRK3-215ENST00000599138 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
VRK3-215ENST00000599138 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
VRK3-215ENST00000599138 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
VRK3-215ENST00000599138 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
VRK3-215ENST00000599138 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
VRK3-215ENST00000599138 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
VRK3-215ENST00000599138 SAMD9Q5K651 1589 aa16.12■□□□□ 0.17
VRK3-215ENST00000599138 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
VRK3-215ENST00000599138 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
VRK3-215ENST00000599138 ABCA8O94911 1581 aa16.09■□□□□ 0.17
VRK3-215ENST00000599138 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
VRK3-215ENST00000599138 ASXL2Q76L83 1435 aa16.07■□□□□ 0.16
VRK3-215ENST00000599138 ZCCHC11Q5TAX3 1644 aaKnown RBP16.05■□□□□ 0.16
VRK3-215ENST00000599138 P3H3Q8IVL6 736 aa16.05■□□□□ 0.16
VRK3-215ENST00000599138 GLI2P10070 1586 aa16.01■□□□□ 0.15
VRK3-215ENST00000599138 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
VRK3-215ENST00000599138 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
VRK3-215ENST00000599138 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
VRK3-215ENST00000599138 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
VRK3-215ENST00000599138 RANGAP1P46060 587 aaPredicted RBP15.98■□□□□ 0.15
VRK3-215ENST00000599138 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
VRK3-215ENST00000599138 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
VRK3-215ENST00000599138 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
VRK3-215ENST00000599138 ATP10BO94823 1461 aa15.96■□□□□ 0.14
VRK3-215ENST00000599138 TSPOAP1O95153 1857 aa15.95■□□□□ 0.14
VRK3-215ENST00000599138 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
VRK3-215ENST00000599138 NUP153P49790 1475 aaKnown RBP15.92■□□□□ 0.14
VRK3-215ENST00000599138 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
VRK3-215ENST00000599138 MAP3K4Q9Y6R4 1608 aa15.92■□□□□ 0.14
VRK3-215ENST00000599138 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
VRK3-215ENST00000599138 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
VRK3-215ENST00000599138 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
VRK3-215ENST00000599138 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
VRK3-215ENST00000599138 KDM6BO15054 1643 aa15.84■□□□□ 0.13
VRK3-215ENST00000599138 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
VRK3-215ENST00000599138 MAGI3Q5TCQ9 1506 aa15.84■□□□□ 0.13
VRK3-215ENST00000599138 CD109Q6YHK3 1445 aa15.83■□□□□ 0.12
VRK3-215ENST00000599138 ABCA9Q8IUA7 1624 aa15.8■□□□□ 0.12
VRK3-215ENST00000599138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
VRK3-215ENST00000599138 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
VRK3-215ENST00000599138 COL17A1Q9UMD9 1497 aaPredicted RBP15.79■□□□□ 0.12
VRK3-215ENST00000599138 PLEKHD1A6NEE1 506 aa15.78■□□□□ 0.12
VRK3-215ENST00000599138 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
VRK3-215ENST00000599138 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
VRK3-215ENST00000599138 CLIP1P30622 1438 aa15.77■□□□□ 0.12
VRK3-215ENST00000599138 CASKIN1Q8WXD9 1431 aa15.74■□□□□ 0.11
VRK3-215ENST00000599138 LRRIQ1Q96JM4 1722 aa15.72■□□□□ 0.11
VRK3-215ENST00000599138 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
VRK3-215ENST00000599138 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
VRK3-215ENST00000599138 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
VRK3-215ENST00000599138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.7■□□□□ 0.1
VRK3-215ENST00000599138 ARAP3Q8WWN8 1544 aa15.7■□□□□ 0.1
VRK3-215ENST00000599138 NEO1Q92859 1461 aa15.69■□□□□ 0.1
VRK3-215ENST00000599138 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
VRK3-215ENST00000599138 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
VRK3-215ENST00000599138 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
VRK3-215ENST00000599138 TTC37Q6PGP7 1564 aa15.67■□□□□ 0.1
VRK3-215ENST00000599138 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
VRK3-215ENST00000599138 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
VRK3-215ENST00000599138 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
VRK3-215ENST00000599138 PLCH2O75038 1416 aa15.62■□□□□ 0.09
VRK3-215ENST00000599138 KIF14Q15058 1648 aa15.62■□□□□ 0.09
VRK3-215ENST00000599138 FANCAO15360 1455 aa15.61■□□□□ 0.09
VRK3-215ENST00000599138 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
VRK3-215ENST00000599138 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
VRK3-215ENST00000599138 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.09
VRK3-215ENST00000599138 RAPGEF3O95398 923 aa15.58■□□□□ 0.08
VRK3-215ENST00000599138 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
VRK3-215ENST00000599138 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
VRK3-215ENST00000599138 RICTORQ6R327 1708 aa15.55■□□□□ 0.08
VRK3-215ENST00000599138 DENND4BO75064 1496 aaPredicted RBP15.55■□□□□ 0.08
VRK3-215ENST00000599138 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
VRK3-215ENST00000599138 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
VRK3-215ENST00000599138 ADGRL1O94910 1474 aa15.52■□□□□ 0.08
VRK3-215ENST00000599138 CDC42BPBQ9Y5S2 1711 aa15.52■□□□□ 0.08
VRK3-215ENST00000599138 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms