RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 KIF27Q86VH2 1401 aa27.65■■■□□ 2.02
SMG9-208ENST00000598886 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
SMG9-208ENST00000598886 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
SMG9-208ENST00000598886 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
SMG9-208ENST00000598886 ADCY10Q96PN6 1610 aa27.52■■■□□ 2
SMG9-208ENST00000598886 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
SMG9-208ENST00000598886 CARMIL1Q5VZK9 1371 aa27.43■■□□□ 1.98
SMG9-208ENST00000598886 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
SMG9-208ENST00000598886 DIP2BQ9P265 1576 aa27.37■■□□□ 1.97
SMG9-208ENST00000598886 ABCC10Q5T3U5 1492 aa27.35■■□□□ 1.97
SMG9-208ENST00000598886 DISP1Q96F81 1524 aa27.26■■□□□ 1.96
SMG9-208ENST00000598886 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
SMG9-208ENST00000598886 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
SMG9-208ENST00000598886 PTPRGP23470 1445 aa27.22■■□□□ 1.95
SMG9-208ENST00000598886 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
SMG9-208ENST00000598886 CARMIL2Q6F5E8 1435 aa27.2■■□□□ 1.94
SMG9-208ENST00000598886 CTTNBP2Q8WZ74 1663 aa27.17■■□□□ 1.94
SMG9-208ENST00000598886 ABCC2Q92887 1545 aa27.17■■□□□ 1.94
SMG9-208ENST00000598886 UHRF1BP1LA0JNW5 1464 aa27.17■■□□□ 1.94
SMG9-208ENST00000598886 KIAA0556O60303 1618 aa27.16■■□□□ 1.94
SMG9-208ENST00000598886 NPM1P06748 294 aaKnown RBP eCLIP27.15■■□□□ 1.94
SMG9-208ENST00000598886 FAM69CQ0P6D2 419 aa27.15■■□□□ 1.94
SMG9-208ENST00000598886 TSPOAP1O95153 1857 aa27.11■■□□□ 1.93
SMG9-208ENST00000598886 PPRC1Q5VV67 1664 aaKnown RBP27.09■■□□□ 1.93
SMG9-208ENST00000598886 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
SMG9-208ENST00000598886 GLI2P10070 1586 aa27.06■■□□□ 1.92
SMG9-208ENST00000598886 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
SMG9-208ENST00000598886 KDM5BQ9UGL1 1544 aa27.05■■□□□ 1.92
SMG9-208ENST00000598886 KDM6BO15054 1643 aa27.05■■□□□ 1.92
SMG9-208ENST00000598886 ASXL2Q76L83 1435 aa27.04■■□□□ 1.92
SMG9-208ENST00000598886 ZCCHC11Q5TAX3 1644 aaKnown RBP27.03■■□□□ 1.92
SMG9-208ENST00000598886 PLB1Q6P1J6 1458 aa27■■□□□ 1.91
SMG9-208ENST00000598886 TTBK1Q5TCY1 1321 aaPredicted RBP26.98■■□□□ 1.91
SMG9-208ENST00000598886 MAP3K4Q9Y6R4 1608 aa26.96■■□□□ 1.91
SMG9-208ENST00000598886 ABCA8O94911 1581 aa26.92■■□□□ 1.9
SMG9-208ENST00000598886 EPRSP07814 1512 aaKnown RBP26.91■■□□□ 1.9
SMG9-208ENST00000598886 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
SMG9-208ENST00000598886 GOLGA3Q08378 1498 aa26.88■■□□□ 1.89
SMG9-208ENST00000598886 WDR7Q9Y4E6 1490 aa26.81■■□□□ 1.88
SMG9-208ENST00000598886 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
SMG9-208ENST00000598886 COL17A1Q9UMD9 1497 aaPredicted RBP26.78■■□□□ 1.88
SMG9-208ENST00000598886 CFAP43Q8NDM7 1665 aa26.73■■□□□ 1.87
SMG9-208ENST00000598886 TEX14Q8IWB6 1497 aa26.71■■□□□ 1.87
SMG9-208ENST00000598886 KDM4FA0A1W2PPD8 638 aa26.68■■□□□ 1.86
SMG9-208ENST00000598886 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
SMG9-208ENST00000598886 EEA1Q15075 1411 aa26.66■■□□□ 1.86
SMG9-208ENST00000598886 MAGI3Q5TCQ9 1506 aa26.65■■□□□ 1.86
SMG9-208ENST00000598886 ATP10BO94823 1461 aa26.61■■□□□ 1.85
SMG9-208ENST00000598886 RAPGEF6Q8TEU7 1601 aa26.61■■□□□ 1.85
SMG9-208ENST00000598886 KIF21BO75037 1637 aa26.58■■□□□ 1.85
SMG9-208ENST00000598886 CD109Q6YHK3 1445 aa26.56■■□□□ 1.84
SMG9-208ENST00000598886 ABCA9Q8IUA7 1624 aa26.55■■□□□ 1.84
SMG9-208ENST00000598886 ADGRL1O94910 1474 aa26.53■■□□□ 1.84
SMG9-208ENST00000598886 P3H3Q8IVL6 736 aa26.52■■□□□ 1.84
SMG9-208ENST00000598886 NUP153P49790 1475 aaKnown RBP26.5■■□□□ 1.83
SMG9-208ENST00000598886 KCNH8Q96L42 1107 aa26.46■■□□□ 1.83
SMG9-208ENST00000598886 FHOD3Q2V2M9 1422 aa26.46■■□□□ 1.83
SMG9-208ENST00000598886 EFCAB5A4FU69 1503 aa26.44■■□□□ 1.82
SMG9-208ENST00000598886 ARAP3Q8WWN8 1544 aa26.44■■□□□ 1.82
SMG9-208ENST00000598886 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
SMG9-208ENST00000598886 FRMPD1Q5SYB0 1578 aa26.35■■□□□ 1.81
SMG9-208ENST00000598886 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SMG9-208ENST00000598886 NEO1Q92859 1461 aa26.31■■□□□ 1.8
SMG9-208ENST00000598886 PHLDB1Q86UU1 1377 aa26.28■■□□□ 1.8
SMG9-208ENST00000598886 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
SMG9-208ENST00000598886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.25■■□□□ 1.79
SMG9-208ENST00000598886 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
SMG9-208ENST00000598886 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
SMG9-208ENST00000598886 RICTORQ6R327 1708 aa26.24■■□□□ 1.79
SMG9-208ENST00000598886 CDK13Q14004 1512 aaKnown RBP26.23■■□□□ 1.79
SMG9-208ENST00000598886 ARHGAP35Q9NRY4 1499 aa26.22■■□□□ 1.79
SMG9-208ENST00000598886 HECW2Q9P2P5 1572 aa26.2■■□□□ 1.78
SMG9-208ENST00000598886 ADAMTSL3P82987 1691 aa26.19■■□□□ 1.78
SMG9-208ENST00000598886 CFAP74Q9C0B2 1584 aa26.19■■□□□ 1.78
SMG9-208ENST00000598886 LRRIQ1Q96JM4 1722 aa26.18■■□□□ 1.78
SMG9-208ENST00000598886 HECW1Q76N89 1606 aa26.17■■□□□ 1.78
SMG9-208ENST00000598886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.15■■□□□ 1.78
SMG9-208ENST00000598886 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
SMG9-208ENST00000598886 ARHGEF40Q8TER5 1519 aa26.14■■□□□ 1.78
SMG9-208ENST00000598886 RAPGEF3O95398 923 aa26.13■■□□□ 1.77
SMG9-208ENST00000598886 BCORL1Q5H9F3 1711 aa26.12■■□□□ 1.77
SMG9-208ENST00000598886 FANCAO15360 1455 aa26.11■■□□□ 1.77
SMG9-208ENST00000598886 ZMYM4Q5VZL5 1548 aa26.11■■□□□ 1.77
SMG9-208ENST00000598886 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
SMG9-208ENST00000598886 FMN1Q68DA7 1419 aa26.11■■□□□ 1.77
SMG9-208ENST00000598886 AKNAQ7Z591 1439 aa26.09■■□□□ 1.77
SMG9-208ENST00000598886 SIGLEC1Q9BZZ2 1709 aa26.08■■□□□ 1.77
SMG9-208ENST00000598886 KIF14Q15058 1648 aa26.06■■□□□ 1.76
SMG9-208ENST00000598886 DENND4BO75064 1496 aaPredicted RBP26.06■■□□□ 1.76
SMG9-208ENST00000598886 MYO5CQ9NQX4 1742 aa26.05■■□□□ 1.76
SMG9-208ENST00000598886 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
SMG9-208ENST00000598886 MADDQ8WXG6 1647 aa26.03■■□□□ 1.76
SMG9-208ENST00000598886 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
SMG9-208ENST00000598886 PLCH2O75038 1416 aa26.01■■□□□ 1.75
SMG9-208ENST00000598886 PTPRMP28827 1452 aa26■■□□□ 1.75
SMG9-208ENST00000598886 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
SMG9-208ENST00000598886 ZFYVE16Q7Z3T8 1539 aa25.96■■□□□ 1.75
SMG9-208ENST00000598886 POGZQ7Z3K3 1410 aa25.96■■□□□ 1.75
SMG9-208ENST00000598886 YEATS2Q9ULM3 1422 aa25.95■■□□□ 1.74
SMG9-208ENST00000598886 TROQ12816 1431 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms