RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 RUSC2Q8N2Y8 1516 aa32.98■■■□□ 2.87
SNRPA-204ENST00000598452 KIAA0586Q9BVV6 1533 aa32.85■■■□□ 2.85
SNRPA-204ENST00000598452 CUL7Q14999 1698 aa32.84■■■□□ 2.85
SNRPA-204ENST00000598452 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
SNRPA-204ENST00000598452 NPM1P06748 294 aaKnown RBP eCLIP32.69■■■□□ 2.82
SNRPA-204ENST00000598452 ADCY10Q96PN6 1610 aa32.65■■■□□ 2.82
SNRPA-204ENST00000598452 KIF13AQ9H1H9 1805 aa32.65■■■□□ 2.82
SNRPA-204ENST00000598452 TTBK1Q5TCY1 1321 aaPredicted RBP32.61■■■□□ 2.81
SNRPA-204ENST00000598452 FAM69CQ0P6D2 419 aa32.61■■■□□ 2.81
SNRPA-204ENST00000598452 ABCC10Q5T3U5 1492 aa32.58■■■□□ 2.81
SNRPA-204ENST00000598452 MAPKBP1O60336 1514 aa32.57■■■□□ 2.8
SNRPA-204ENST00000598452 PTPRGP23470 1445 aa32.57■■■□□ 2.8
SNRPA-204ENST00000598452 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.8
SNRPA-204ENST00000598452 IQGAP2Q13576 1575 aa32.51■■■□□ 2.79
SNRPA-204ENST00000598452 AEBP2Q6ZN18 517 aaPredicted RBP32.51■■■□□ 2.79
SNRPA-204ENST00000598452 TNIKQ9UKE5 1360 aa32.49■■■□□ 2.79
SNRPA-204ENST00000598452 DIP2BQ9P265 1576 aa32.48■■■□□ 2.79
SNRPA-204ENST00000598452 RAPGEF2Q9Y4G8 1499 aa32.47■■■□□ 2.79
SNRPA-204ENST00000598452 DISP1Q96F81 1524 aa32.4■■■□□ 2.78
SNRPA-204ENST00000598452 ABCC2Q92887 1545 aa32.36■■■□□ 2.77
SNRPA-204ENST00000598452 UGGT2Q9NYU1 1516 aa32.32■■■□□ 2.76
SNRPA-204ENST00000598452 UACAQ9BZF9 1416 aa32.31■■■□□ 2.76
SNRPA-204ENST00000598452 UHRF1BP1LA0JNW5 1464 aa32.29■■■□□ 2.76
SNRPA-204ENST00000598452 ASXL2Q76L83 1435 aa32.27■■■□□ 2.76
SNRPA-204ENST00000598452 TSPOAP1O95153 1857 aa32.23■■■□□ 2.75
SNRPA-204ENST00000598452 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
SNRPA-204ENST00000598452 PLB1Q6P1J6 1458 aa32.21■■■□□ 2.75
SNRPA-204ENST00000598452 KDM6BO15054 1643 aa32.18■■■□□ 2.74
SNRPA-204ENST00000598452 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
SNRPA-204ENST00000598452 KDM5BQ9UGL1 1544 aa32.16■■■□□ 2.74
SNRPA-204ENST00000598452 CTTNBP2Q8WZ74 1663 aa32.11■■■□□ 2.73
SNRPA-204ENST00000598452 GLI2P10070 1586 aa32.11■■■□□ 2.73
SNRPA-204ENST00000598452 ZCCHC11Q5TAX3 1644 aaKnown RBP32.07■■■□□ 2.72
SNRPA-204ENST00000598452 EPRSP07814 1512 aaKnown RBP32.06■■■□□ 2.72
SNRPA-204ENST00000598452 GOLGA3Q08378 1498 aa32.04■■■□□ 2.72
SNRPA-204ENST00000598452 PPRC1Q5VV67 1664 aaKnown RBP32.03■■■□□ 2.72
SNRPA-204ENST00000598452 CSRNP3Q8WYN3 585 aa31.96■■■□□ 2.71
SNRPA-204ENST00000598452 ABCA8O94911 1581 aa31.94■■■□□ 2.7
SNRPA-204ENST00000598452 KDM4FA0A1W2PPD8 638 aa31.94■■■□□ 2.7
SNRPA-204ENST00000598452 WDR7Q9Y4E6 1490 aa31.94■■■□□ 2.7
SNRPA-204ENST00000598452 MAP3K4Q9Y6R4 1608 aa31.93■■■□□ 2.7
SNRPA-204ENST00000598452 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
SNRPA-204ENST00000598452 COL17A1Q9UMD9 1497 aaPredicted RBP31.91■■■□□ 2.7
SNRPA-204ENST00000598452 KCNH8Q96L42 1107 aa31.86■■■□□ 2.69
SNRPA-204ENST00000598452 TEX14Q8IWB6 1497 aa31.84■■■□□ 2.69
SNRPA-204ENST00000598452 ARID3CA6NKF2 412 aa31.83■■■□□ 2.69
SNRPA-204ENST00000598452 FAM9AQ8IZU1 332 aaPredicted RBP31.77■■■□□ 2.68
SNRPA-204ENST00000598452 CD109Q6YHK3 1445 aa31.76■■■□□ 2.68
SNRPA-204ENST00000598452 EEA1Q15075 1411 aa31.74■■■□□ 2.67
SNRPA-204ENST00000598452 RANGAP1P46060 587 aaPredicted RBP31.73■■■□□ 2.67
SNRPA-204ENST00000598452 ATP10BO94823 1461 aa31.72■■■□□ 2.67
SNRPA-204ENST00000598452 SAMD9Q5K651 1589 aa31.72■■■□□ 2.67
SNRPA-204ENST00000598452 MAGI3Q5TCQ9 1506 aa31.7■■■□□ 2.66
SNRPA-204ENST00000598452 CFAP43Q8NDM7 1665 aa31.67■■■□□ 2.66
SNRPA-204ENST00000598452 ADGRL1O94910 1474 aa31.65■■■□□ 2.66
SNRPA-204ENST00000598452 FHOD3Q2V2M9 1422 aa31.59■■■□□ 2.65
SNRPA-204ENST00000598452 RAPGEF6Q8TEU7 1601 aa31.59■■■□□ 2.65
SNRPA-204ENST00000598452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.58■■■□□ 2.65
SNRPA-204ENST00000598452 HNRNPUL2Q1KMD3 747 aaKnown RBP31.58■■■□□ 2.65
SNRPA-204ENST00000598452 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
SNRPA-204ENST00000598452 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
SNRPA-204ENST00000598452 KIF21BO75037 1637 aa31.49■■■□□ 2.63
SNRPA-204ENST00000598452 ABCA9Q8IUA7 1624 aa31.47■■■□□ 2.63
SNRPA-204ENST00000598452 ARAP3Q8WWN8 1544 aa31.45■■■□□ 2.63
SNRPA-204ENST00000598452 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
SNRPA-204ENST00000598452 EFCAB5A4FU69 1503 aa31.39■■■□□ 2.61
SNRPA-204ENST00000598452 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
SNRPA-204ENST00000598452 UBTFP17480 764 aaKnown RBP31.37■■■□□ 2.61
SNRPA-204ENST00000598452 PHLDB1Q86UU1 1377 aa31.36■■■□□ 2.61
SNRPA-204ENST00000598452 RAPGEF3O95398 923 aa31.36■■■□□ 2.61
SNRPA-204ENST00000598452 NEO1Q92859 1461 aa31.33■■■□□ 2.61
SNRPA-204ENST00000598452 CDK13Q14004 1512 aaKnown RBP31.24■■■□□ 2.59
SNRPA-204ENST00000598452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.21■■■□□ 2.59
SNRPA-204ENST00000598452 ATP1B4Q9UN42 357 aaPredicted RBP31.21■■■□□ 2.59
SNRPA-204ENST00000598452 FRMPD1Q5SYB0 1578 aa31.2■■■□□ 2.58
SNRPA-204ENST00000598452 ARHGAP35Q9NRY4 1499 aa31.2■■■□□ 2.58
SNRPA-204ENST00000598452 HECW2Q9P2P5 1572 aa31.17■■■□□ 2.58
SNRPA-204ENST00000598452 AKNAQ7Z591 1439 aa31.16■■■□□ 2.58
SNRPA-204ENST00000598452 TTC37Q6PGP7 1564 aa31.16■■■□□ 2.58
SNRPA-204ENST00000598452 FANCAO15360 1455 aa31.15■■■□□ 2.58
SNRPA-204ENST00000598452 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
SNRPA-204ENST00000598452 DENND4BO75064 1496 aaPredicted RBP31.14■■■□□ 2.57
SNRPA-204ENST00000598452 ARID4BQ4LE39 1312 aaPredicted RBP31.09■■■□□ 2.57
SNRPA-204ENST00000598452 HECW1Q76N89 1606 aa31.07■■■□□ 2.56
SNRPA-204ENST00000598452 ADAMTSL3P82987 1691 aa31.05■■■□□ 2.56
SNRPA-204ENST00000598452 CFAP74Q9C0B2 1584 aa31.05■■■□□ 2.56
SNRPA-204ENST00000598452 RICTORQ6R327 1708 aa31.04■■■□□ 2.56
SNRPA-204ENST00000598452 PLCH2O75038 1416 aa31.03■■■□□ 2.56
SNRPA-204ENST00000598452 PTPRMP28827 1452 aa31.02■■■□□ 2.56
SNRPA-204ENST00000598452 ARHGEF40Q8TER5 1519 aa31.01■■■□□ 2.55
SNRPA-204ENST00000598452 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
SNRPA-204ENST00000598452 BCORL1Q5H9F3 1711 aa30.98■■■□□ 2.55
SNRPA-204ENST00000598452 SCAPERQ9BY12 1400 aa30.97■■■□□ 2.55
SNRPA-204ENST00000598452 YEATS2Q9ULM3 1422 aa30.97■■■□□ 2.55
SNRPA-204ENST00000598452 ZMYM4Q5VZL5 1548 aa30.94■■■□□ 2.54
SNRPA-204ENST00000598452 KIF14Q15058 1648 aa30.94■■■□□ 2.54
SNRPA-204ENST00000598452 MADDQ8WXG6 1647 aa30.94■■■□□ 2.54
SNRPA-204ENST00000598452 TROQ12816 1431 aaPredicted RBP30.93■■■□□ 2.54
SNRPA-204ENST00000598452 ILDR1Q86SU0 546 aaPredicted RBP30.93■■■□□ 2.54
SNRPA-204ENST00000598452 EFCAB2Q5VUJ9 269 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms