RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 CUL7Q14999 1698 aa15.34■□□□□ 0.05
ARHGEF1-215ENST00000598444 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
ARHGEF1-215ENST00000598444 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
ARHGEF1-215ENST00000598444 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
ARHGEF1-215ENST00000598444 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
ARHGEF1-215ENST00000598444 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
ARHGEF1-215ENST00000598444 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
ARHGEF1-215ENST00000598444 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
ARHGEF1-215ENST00000598444 TTBK1Q5TCY1 1321 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-215ENST00000598444 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
ARHGEF1-215ENST00000598444 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
ARHGEF1-215ENST00000598444 PTPRGP23470 1445 aa15.12■□□□□ 0.01
ARHGEF1-215ENST00000598444 FAM69CQ0P6D2 419 aa15.1■□□□□ 0.01
ARHGEF1-215ENST00000598444 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
ARHGEF1-215ENST00000598444 MAPKBP1O60336 1514 aa15.08■□□□□ 0.01
ARHGEF1-215ENST00000598444 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0
ARHGEF1-215ENST00000598444 TSPOAP1O95153 1857 aa15.07■□□□□ 0
ARHGEF1-215ENST00000598444 CTTNBP2Q8WZ74 1663 aa15.06■□□□□ 0
ARHGEF1-215ENST00000598444 DISP1Q96F81 1524 aa15.05■□□□□ -0
ARHGEF1-215ENST00000598444 DIP2BQ9P265 1576 aa15.05■□□□□ -0
ARHGEF1-215ENST00000598444 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
ARHGEF1-215ENST00000598444 ABCC2Q92887 1545 aa15□□□□□ -0.01
ARHGEF1-215ENST00000598444 UACAQ9BZF9 1416 aa15□□□□□ -0.01
ARHGEF1-215ENST00000598444 KIAA0556O60303 1618 aa14.99□□□□□ -0.01
ARHGEF1-215ENST00000598444 UHRF1BP1LA0JNW5 1464 aa14.98□□□□□ -0.01
ARHGEF1-215ENST00000598444 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
ARHGEF1-215ENST00000598444 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF1-215ENST00000598444 ASXL2Q76L83 1435 aa14.95□□□□□ -0.02
ARHGEF1-215ENST00000598444 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
ARHGEF1-215ENST00000598444 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
ARHGEF1-215ENST00000598444 ZCCHC11Q5TAX3 1644 aaKnown RBP14.93□□□□□ -0.02
ARHGEF1-215ENST00000598444 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
ARHGEF1-215ENST00000598444 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
ARHGEF1-215ENST00000598444 KDM6BO15054 1643 aa14.91□□□□□ -0.02
ARHGEF1-215ENST00000598444 GLI2P10070 1586 aa14.9□□□□□ -0.02
ARHGEF1-215ENST00000598444 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
ARHGEF1-215ENST00000598444 P3H3Q8IVL6 736 aa14.87□□□□□ -0.03
ARHGEF1-215ENST00000598444 EPRSP07814 1512 aaKnown RBP14.87□□□□□ -0.03
ARHGEF1-215ENST00000598444 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF1-215ENST00000598444 ABCA8O94911 1581 aa14.85□□□□□ -0.03
ARHGEF1-215ENST00000598444 EEA1Q15075 1411 aa14.84□□□□□ -0.03
ARHGEF1-215ENST00000598444 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
ARHGEF1-215ENST00000598444 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
ARHGEF1-215ENST00000598444 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
ARHGEF1-215ENST00000598444 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF1-215ENST00000598444 SAMD9Q5K651 1589 aa14.79□□□□□ -0.04
ARHGEF1-215ENST00000598444 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
ARHGEF1-215ENST00000598444 TEX14Q8IWB6 1497 aa14.77□□□□□ -0.04
ARHGEF1-215ENST00000598444 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.05
ARHGEF1-215ENST00000598444 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
ARHGEF1-215ENST00000598444 ATP10BO94823 1461 aa14.75□□□□□ -0.05
ARHGEF1-215ENST00000598444 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF1-215ENST00000598444 CD109Q6YHK3 1445 aa14.74□□□□□ -0.05
ARHGEF1-215ENST00000598444 KIF21BO75037 1637 aa14.74□□□□□ -0.05
ARHGEF1-215ENST00000598444 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
ARHGEF1-215ENST00000598444 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
ARHGEF1-215ENST00000598444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
ARHGEF1-215ENST00000598444 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
ARHGEF1-215ENST00000598444 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
ARHGEF1-215ENST00000598444 MAGI3Q5TCQ9 1506 aa14.7□□□□□ -0.06
ARHGEF1-215ENST00000598444 FHOD3Q2V2M9 1422 aa14.69□□□□□ -0.06
ARHGEF1-215ENST00000598444 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
ARHGEF1-215ENST00000598444 NUP153P49790 1475 aaKnown RBP14.65□□□□□ -0.06
ARHGEF1-215ENST00000598444 ABCA9Q8IUA7 1624 aa14.65□□□□□ -0.06
ARHGEF1-215ENST00000598444 EFCAB5A4FU69 1503 aa14.65□□□□□ -0.06
ARHGEF1-215ENST00000598444 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
ARHGEF1-215ENST00000598444 ADGRL1O94910 1474 aa14.6□□□□□ -0.07
ARHGEF1-215ENST00000598444 ARAP3Q8WWN8 1544 aa14.59□□□□□ -0.07
ARHGEF1-215ENST00000598444 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF1-215ENST00000598444 PHLDB1Q86UU1 1377 aa14.58□□□□□ -0.08
ARHGEF1-215ENST00000598444 NEO1Q92859 1461 aa14.55□□□□□ -0.08
ARHGEF1-215ENST00000598444 RAPGEF3O95398 923 aa14.54□□□□□ -0.08
ARHGEF1-215ENST00000598444 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
ARHGEF1-215ENST00000598444 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
ARHGEF1-215ENST00000598444 FMN1Q68DA7 1419 aa14.53□□□□□ -0.08
ARHGEF1-215ENST00000598444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
ARHGEF1-215ENST00000598444 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
ARHGEF1-215ENST00000598444 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
ARHGEF1-215ENST00000598444 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
ARHGEF1-215ENST00000598444 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF1-215ENST00000598444 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
ARHGEF1-215ENST00000598444 AKNAQ7Z591 1439 aa14.48□□□□□ -0.09
ARHGEF1-215ENST00000598444 RICTORQ6R327 1708 aa14.47□□□□□ -0.09
ARHGEF1-215ENST00000598444 FANCAO15360 1455 aa14.47□□□□□ -0.09
ARHGEF1-215ENST00000598444 FRMPD1Q5SYB0 1578 aa14.47□□□□□ -0.09
ARHGEF1-215ENST00000598444 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-215ENST00000598444 MYO5CQ9NQX4 1742 aa14.45□□□□□ -0.1
ARHGEF1-215ENST00000598444 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
ARHGEF1-215ENST00000598444 PLCH2O75038 1416 aa14.42□□□□□ -0.1
ARHGEF1-215ENST00000598444 KIF14Q15058 1648 aa14.41□□□□□ -0.1
ARHGEF1-215ENST00000598444 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
ARHGEF1-215ENST00000598444 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
ARHGEF1-215ENST00000598444 BCORL1Q5H9F3 1711 aa14.4□□□□□ -0.1
ARHGEF1-215ENST00000598444 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF1-215ENST00000598444 CASKIN1Q8WXD9 1431 aa14.39□□□□□ -0.11
ARHGEF1-215ENST00000598444 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
ARHGEF1-215ENST00000598444 PCF11O94913 1555 aaKnown RBP14.39□□□□□ -0.11
ARHGEF1-215ENST00000598444 HECW2Q9P2P5 1572 aa14.39□□□□□ -0.11
ARHGEF1-215ENST00000598444 CLIP1P30622 1438 aa14.38□□□□□ -0.11
ARHGEF1-215ENST00000598444 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms