RNA–Protein interactions for RNA: ENST00000597793.5

PTOV1-209, Transcript of prostate tumor overexpressed 1, human

TSL 1 (best)

Gene PTOV1, Length 1,716 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTOV1-209	ENST00000597793	CLASP1	Q7Z460	1538 aa		31.42	■■■□□ 2.62
PTOV1-209	ENST00000597793	UBTF	P17480	764 aa	Known RBP	31.35	■■■□□ 2.61
PTOV1-209	ENST00000597793	IQGAP2	Q13576	1575 aa		31.35	■■■□□ 2.61
PTOV1-209	ENST00000597793	EHMT2	Q96KQ7	1210 aa		31.29	■■■□□ 2.6
PTOV1-209	ENST00000597793	SHROOM2	Q13796	1616 aa		31.27	■■■□□ 2.6
PTOV1-209	ENST00000597793	TNIK	Q9UKE5	1360 aa		31.23	■■■□□ 2.59
PTOV1-209	ENST00000597793	JPH4	Q96JJ6	628 aa		31.23	■■■□□ 2.59
PTOV1-209	ENST00000597793	UGGT2	Q9NYU1	1516 aa		31.2	■■■□□ 2.59
PTOV1-209	ENST00000597793	LOC105371045	A0A1W2PR82	267 aa		31.17	■■■□□ 2.58
PTOV1-209	ENST00000597793	PRG4	Q92954	1404 aa	Predicted RBP	31.11	■■■□□ 2.57
PTOV1-209	ENST00000597793	CARMIL2	Q6F5E8	1435 aa		31.1	■■■□□ 2.57
PTOV1-209	ENST00000597793	EFCAB5	A4FU69	1503 aa		31.06	■■■□□ 2.56
PTOV1-209	ENST00000597793	ARHGEF11	O15085	1522 aa		31.04	■■■□□ 2.56
PTOV1-209	ENST00000597793	SAMD9	Q5K651	1589 aa		31.04	■■■□□ 2.56
PTOV1-209	ENST00000597793	DISP1	Q96F81	1524 aa		31.03	■■■□□ 2.56
PTOV1-209	ENST00000597793	KIAA0556	O60303	1618 aa		31.03	■■■□□ 2.56
PTOV1-209	ENST00000597793	DNAJC5	Q9H3Z4	198 aa		31.03	■■■□□ 2.56
PTOV1-209	ENST00000597793	ERCC6L2	Q5T890	1561 aa		30.97	■■■□□ 2.55
PTOV1-209	ENST00000597793	RANGAP1	P46060	587 aa	Predicted RBP	30.97	■■■□□ 2.55
PTOV1-209	ENST00000597793	RIMBP3C	A6NJZ7	1639 aa		30.97	■■■□□ 2.55
PTOV1-209	ENST00000597793	RIMBP3B	A6NNM3	1639 aa		30.97	■■■□□ 2.55
PTOV1-209	ENST00000597793	RIMBP3	Q9UFD9	1639 aa		30.97	■■■□□ 2.55
PTOV1-209	ENST00000597793	CLIP1	P30622	1438 aa		30.95	■■■□□ 2.55
PTOV1-209	ENST00000597793	CEP162	Q5TB80	1403 aa		30.95	■■■□□ 2.55
PTOV1-209	ENST00000597793	ARHGAP35	Q9NRY4	1499 aa		30.92	■■■□□ 2.54
PTOV1-209	ENST00000597793	PTPRG	P23470	1445 aa		30.84	■■■□□ 2.53
PTOV1-209	ENST00000597793	P3H3	Q8IVL6	736 aa		30.83	■■■□□ 2.53
PTOV1-209	ENST00000597793	FHOD3	Q2V2M9	1422 aa		30.82	■■■□□ 2.52
PTOV1-209	ENST00000597793	ARAP1	Q96P48	1450 aa		30.81	■■■□□ 2.52
PTOV1-209	ENST00000597793	FMN1	Q68DA7	1419 aa		30.76	■■■□□ 2.51
PTOV1-209	ENST00000597793	TTBK1	Q5TCY1	1321 aa	Predicted RBP	30.69	■■■□□ 2.5
PTOV1-209	ENST00000597793	CYB5RL	Q6IPT4	315 aa		30.68	■■■□□ 2.5
PTOV1-209	ENST00000597793	UACA	Q9BZF9	1416 aa		30.66	■■■□□ 2.5
PTOV1-209	ENST00000597793	ABCA8	O94911	1581 aa		30.64	■■■□□ 2.5
PTOV1-209	ENST00000597793	UHRF1BP1L	A0JNW5	1464 aa		30.63	■■■□□ 2.49
PTOV1-209	ENST00000597793	RAPGEF6	Q8TEU7	1601 aa		30.62	■■■□□ 2.49
PTOV1-209	ENST00000597793	PLB1	Q6P1J6	1458 aa		30.62	■■■□□ 2.49
PTOV1-209	ENST00000597793	ABCC2	Q92887	1545 aa		30.61	■■■□□ 2.49
PTOV1-209	ENST00000597793	VPS8	Q8N3P4	1428 aa		30.57	■■■□□ 2.48
PTOV1-209	ENST00000597793	ADCY10	Q96PN6	1610 aa		30.56	■■■□□ 2.48
PTOV1-209	ENST00000597793	CASKIN1	Q8WXD9	1431 aa		30.55	■■■□□ 2.48
PTOV1-209	ENST00000597793	HECW1	Q76N89	1606 aa		30.54	■■■□□ 2.48
PTOV1-209	ENST00000597793	FYCO1	Q9BQS8	1478 aa		30.53	■■■□□ 2.48
PTOV1-209	ENST00000597793	PCF11	O94913	1555 aa	Known RBP	30.52	■■■□□ 2.48
PTOV1-209	ENST00000597793	NUP153	P49790	1475 aa	Known RBP	30.47	■■■□□ 2.47
PTOV1-209	ENST00000597793	KDM5B	Q9UGL1	1544 aa		30.46	■■■□□ 2.47
PTOV1-209	ENST00000597793	NPM1	P06748	294 aa	Known RBP eCLIP	30.45	■■■□□ 2.47
PTOV1-209	ENST00000597793	ATP1B4	Q9UN42	357 aa	Predicted RBP	30.42	■■■□□ 2.46
PTOV1-209	ENST00000597793	CCDC18	Q5T9S5	1454 aa		30.41	■■■□□ 2.46
PTOV1-209	ENST00000597793	ZCCHC11	Q5TAX3	1644 aa	Known RBP	30.39	■■■□□ 2.46
PTOV1-209	ENST00000597793	EPRS	P07814	1512 aa	Known RBP	30.39	■■■□□ 2.45
PTOV1-209	ENST00000597793	ATP10B	O94823	1461 aa		30.37	■■■□□ 2.45
PTOV1-209	ENST00000597793	LRRIQ1	Q96JM4	1722 aa		30.34	■■■□□ 2.45
PTOV1-209	ENST00000597793	MAPKBP1	O60336	1514 aa		30.3	■■■□□ 2.44
PTOV1-209	ENST00000597793	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	30.3	■■■□□ 2.44
PTOV1-209	ENST00000597793	HNRNPUL2	Q1KMD3	747 aa	Known RBP	30.3	■■■□□ 2.44
PTOV1-209	ENST00000597793	CDK13	Q14004	1512 aa	Known RBP	30.29	■■■□□ 2.44
PTOV1-209	ENST00000597793	MAP3K1	Q13233	1512 aa		30.28	■■■□□ 2.44
PTOV1-209	ENST00000597793	ARID3C	A6NKF2	412 aa		30.27	■■■□□ 2.44
PTOV1-209	ENST00000597793	CDK11A	Q9UQ88	783 aa	Predicted RBP	30.27	■■■□□ 2.44
PTOV1-209	ENST00000597793	APLP2	Q06481	763 aa		30.25	■■■□□ 2.43
PTOV1-209	ENST00000597793	CFAP43	Q8NDM7	1665 aa		30.25	■■■□□ 2.43
PTOV1-209	ENST00000597793	TIAM1	Q13009	1591 aa		30.22	■■■□□ 2.43
PTOV1-209	ENST00000597793	ASXL2	Q76L83	1435 aa		30.22	■■■□□ 2.43
PTOV1-209	ENST00000597793	PLEKHD1	A6NEE1	506 aa		30.22	■■■□□ 2.43
PTOV1-209	ENST00000597793	WDR7	Q9Y4E6	1490 aa		30.19	■■■□□ 2.42
PTOV1-209	ENST00000597793	TRO	Q12816	1431 aa	Predicted RBP	30.12	■■■□□ 2.41
PTOV1-209	ENST00000597793	MTUS2	Q5JR59	1369 aa		30.11	■■■□□ 2.41
PTOV1-209	ENST00000597793	EHBP1L1	Q8N3D4	1523 aa		30.1	■■■□□ 2.41
PTOV1-209	ENST00000597793	LRRC9	Q6ZRR7	1453 aa		30.08	■■■□□ 2.41
PTOV1-209	ENST00000597793	MAGI3	Q5TCQ9	1506 aa		30.07	■■■□□ 2.4
PTOV1-209	ENST00000597793	ABCC10	Q5T3U5	1492 aa		30.05	■■■□□ 2.4
PTOV1-209	ENST00000597793	KIF14	Q15058	1648 aa		30.04	■■■□□ 2.4
PTOV1-209	ENST00000597793	DIP2B	Q9P265	1576 aa		30.02	■■■□□ 2.4
PTOV1-209	ENST00000597793	GLI2	P10070	1586 aa		30.01	■■■□□ 2.4
PTOV1-209	ENST00000597793	TRIM26	Q12899	539 aa	Predicted RBP	30	■■■□□ 2.39
PTOV1-209	ENST00000597793	KCNH8	Q96L42	1107 aa		30	■■■□□ 2.39
PTOV1-209	ENST00000597793	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.98	■■■□□ 2.39
PTOV1-209	ENST00000597793	KANK4	Q5T7N3	995 aa	Predicted RBP	29.97	■■■□□ 2.39
PTOV1-209	ENST00000597793	ABCA9	Q8IUA7	1624 aa		29.96	■■■□□ 2.39
PTOV1-209	ENST00000597793	KIF13A	Q9H1H9	1805 aa		29.95	■■■□□ 2.39
PTOV1-209	ENST00000597793	PCGF6	Q9BYE7	350 aa		29.94	■■■□□ 2.38
PTOV1-209	ENST00000597793	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	29.93	■■■□□ 2.38
PTOV1-209	ENST00000597793	FAM69C	Q0P6D2	419 aa		29.93	■■■□□ 2.38
PTOV1-209	ENST00000597793	MAP3K4	Q9Y6R4	1608 aa		29.88	■■■□□ 2.37
PTOV1-209	ENST00000597793	NCOA2	Q15596	1464 aa		29.88	■■■□□ 2.37
PTOV1-209	ENST00000597793	TTC37	Q6PGP7	1564 aa		29.88	■■■□□ 2.37
PTOV1-209	ENST00000597793	TRH	P20396	242 aa	Predicted RBP	29.86	■■■□□ 2.37
PTOV1-209	ENST00000597793	MYO5C	Q9NQX4	1742 aa		29.85	■■■□□ 2.37
PTOV1-209	ENST00000597793	CD109	Q6YHK3	1445 aa		29.83	■■■□□ 2.37
PTOV1-209	ENST00000597793	CCNB3	Q8WWL7	1395 aa		29.81	■■■□□ 2.36
PTOV1-209	ENST00000597793	ITSN2	Q9NZM3	1697 aa		29.81	■■■□□ 2.36
PTOV1-209	ENST00000597793	ARAP3	Q8WWN8	1544 aa		29.8	■■■□□ 2.36
PTOV1-209	ENST00000597793	CDC42BPA	Q5VT25	1732 aa		29.79	■■■□□ 2.36
PTOV1-209	ENST00000597793	PLCH2	O75038	1416 aa		29.78	■■■□□ 2.36
PTOV1-209	ENST00000597793	PREX2	Q70Z35	1606 aa		29.77	■■■□□ 2.36
PTOV1-209	ENST00000597793	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.76	■■■□□ 2.35
PTOV1-209	ENST00000597793	TEX14	Q8IWB6	1497 aa		29.74	■■■□□ 2.35
PTOV1-209	ENST00000597793	CDC42BPB	Q9Y5S2	1711 aa		29.72	■■■□□ 2.35
PTOV1-209	ENST00000597793	TSPOAP1	O95153	1857 aa		29.72	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms