RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
NOTCH3-204ENST00000597756 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
NOTCH3-204ENST00000597756 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
NOTCH3-204ENST00000597756 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.98
NOTCH3-204ENST00000597756 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
NOTCH3-204ENST00000597756 EEA1Q15075 1411 aa21.11■□□□□ 0.97
NOTCH3-204ENST00000597756 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
NOTCH3-204ENST00000597756 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
NOTCH3-204ENST00000597756 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
NOTCH3-204ENST00000597756 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
NOTCH3-204ENST00000597756 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
NOTCH3-204ENST00000597756 FAM9AQ8IZU1 332 aaPredicted RBP20.94■□□□□ 0.94
NOTCH3-204ENST00000597756 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
NOTCH3-204ENST00000597756 CARMIL2Q6F5E8 1435 aa20.9■□□□□ 0.94
NOTCH3-204ENST00000597756 KIF21BO75037 1637 aa20.89■□□□□ 0.93
NOTCH3-204ENST00000597756 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
NOTCH3-204ENST00000597756 PTPRGP23470 1445 aa20.84■□□□□ 0.93
NOTCH3-204ENST00000597756 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
NOTCH3-204ENST00000597756 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
NOTCH3-204ENST00000597756 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
NOTCH3-204ENST00000597756 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
NOTCH3-204ENST00000597756 SAMD9Q5K651 1589 aa20.72■□□□□ 0.91
NOTCH3-204ENST00000597756 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
NOTCH3-204ENST00000597756 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
NOTCH3-204ENST00000597756 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
NOTCH3-204ENST00000597756 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
NOTCH3-204ENST00000597756 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
NOTCH3-204ENST00000597756 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
NOTCH3-204ENST00000597756 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
NOTCH3-204ENST00000597756 ABCA8O94911 1581 aa20.63■□□□□ 0.89
NOTCH3-204ENST00000597756 P3H3Q8IVL6 736 aa20.63■□□□□ 0.89
NOTCH3-204ENST00000597756 KDM5BQ9UGL1 1544 aa20.63■□□□□ 0.89
NOTCH3-204ENST00000597756 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
NOTCH3-204ENST00000597756 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
NOTCH3-204ENST00000597756 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
NOTCH3-204ENST00000597756 EFCAB5A4FU69 1503 aa20.59■□□□□ 0.89
NOTCH3-204ENST00000597756 ABCC10Q5T3U5 1492 aa20.57■□□□□ 0.88
NOTCH3-204ENST00000597756 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
NOTCH3-204ENST00000597756 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
NOTCH3-204ENST00000597756 ZCCHC11Q5TAX3 1644 aaKnown RBP20.54■□□□□ 0.88
NOTCH3-204ENST00000597756 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
NOTCH3-204ENST00000597756 DIP2BQ9P265 1576 aa20.52■□□□□ 0.88
NOTCH3-204ENST00000597756 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.88
NOTCH3-204ENST00000597756 FAM69CQ0P6D2 419 aa20.49■□□□□ 0.87
NOTCH3-204ENST00000597756 RAPGEF6Q8TEU7 1601 aa20.49■□□□□ 0.87
NOTCH3-204ENST00000597756 ATP10BO94823 1461 aa20.47■□□□□ 0.87
NOTCH3-204ENST00000597756 GLI2P10070 1586 aa20.45■□□□□ 0.86
NOTCH3-204ENST00000597756 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
NOTCH3-204ENST00000597756 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
NOTCH3-204ENST00000597756 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
NOTCH3-204ENST00000597756 FMN1Q68DA7 1419 aa20.4■□□□□ 0.86
NOTCH3-204ENST00000597756 CLIP1P30622 1438 aa20.36■□□□□ 0.85
NOTCH3-204ENST00000597756 LOC105371045A0A1W2PR82 267 aa20.35■□□□□ 0.85
NOTCH3-204ENST00000597756 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
NOTCH3-204ENST00000597756 TSPOAP1O95153 1857 aa20.34■□□□□ 0.85
NOTCH3-204ENST00000597756 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
NOTCH3-204ENST00000597756 MAP3K4Q9Y6R4 1608 aa20.33■□□□□ 0.84
NOTCH3-204ENST00000597756 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
NOTCH3-204ENST00000597756 HECW1Q76N89 1606 aa20.27■□□□□ 0.84
NOTCH3-204ENST00000597756 CFAP43Q8NDM7 1665 aa20.27■□□□□ 0.84
NOTCH3-204ENST00000597756 CEP162Q5TB80 1403 aa20.27■□□□□ 0.83
NOTCH3-204ENST00000597756 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.83
NOTCH3-204ENST00000597756 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
NOTCH3-204ENST00000597756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
NOTCH3-204ENST00000597756 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
NOTCH3-204ENST00000597756 LRRIQ1Q96JM4 1722 aa20.26■□□□□ 0.83
NOTCH3-204ENST00000597756 CDK13Q14004 1512 aaKnown RBP20.26■□□□□ 0.83
NOTCH3-204ENST00000597756 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
NOTCH3-204ENST00000597756 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
NOTCH3-204ENST00000597756 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
NOTCH3-204ENST00000597756 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
NOTCH3-204ENST00000597756 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
NOTCH3-204ENST00000597756 FYCO1Q9BQS8 1478 aa20.19■□□□□ 0.82
NOTCH3-204ENST00000597756 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
NOTCH3-204ENST00000597756 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
NOTCH3-204ENST00000597756 CCDC18Q5T9S5 1454 aa20.15■□□□□ 0.82
NOTCH3-204ENST00000597756 COL17A1Q9UMD9 1497 aaPredicted RBP20.15■□□□□ 0.82
NOTCH3-204ENST00000597756 KDM6BO15054 1643 aa20.15■□□□□ 0.82
NOTCH3-204ENST00000597756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.81
NOTCH3-204ENST00000597756 TROQ12816 1431 aaPredicted RBP20.12■□□□□ 0.81
NOTCH3-204ENST00000597756 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
NOTCH3-204ENST00000597756 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
NOTCH3-204ENST00000597756 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
NOTCH3-204ENST00000597756 NEO1Q92859 1461 aa20.06■□□□□ 0.8
NOTCH3-204ENST00000597756 KIF14Q15058 1648 aa20.05■□□□□ 0.8
NOTCH3-204ENST00000597756 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
NOTCH3-204ENST00000597756 PLCH2O75038 1416 aa20.03■□□□□ 0.8
NOTCH3-204ENST00000597756 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
NOTCH3-204ENST00000597756 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
NOTCH3-204ENST00000597756 FANCAO15360 1455 aa19.98■□□□□ 0.79
NOTCH3-204ENST00000597756 CDC42BPBQ9Y5S2 1711 aa19.96■□□□□ 0.79
NOTCH3-204ENST00000597756 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
NOTCH3-204ENST00000597756 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
NOTCH3-204ENST00000597756 MTUS2Q5JR59 1369 aa19.93■□□□□ 0.78
NOTCH3-204ENST00000597756 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
NOTCH3-204ENST00000597756 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
NOTCH3-204ENST00000597756 RAPGEF3O95398 923 aa19.92■□□□□ 0.78
NOTCH3-204ENST00000597756 CDC42BPAQ5VT25 1732 aa19.92■□□□□ 0.78
NOTCH3-204ENST00000597756 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
NOTCH3-204ENST00000597756 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms