RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 CUL7Q14999 1698 aa37.01■■■■□ 3.52
C19orf54-205ENST00000596809 CARMIL1Q5VZK9 1371 aa37■■■■□ 3.51
C19orf54-205ENST00000596809 RUSC2Q8N2Y8 1516 aa36.96■■■■□ 3.51
C19orf54-205ENST00000596809 KIAA0586Q9BVV6 1533 aa36.93■■■■□ 3.5
C19orf54-205ENST00000596809 RAPGEF2Q9Y4G8 1499 aa36.67■■■■□ 3.46
C19orf54-205ENST00000596809 NPM1P06748 294 aaKnown RBP eCLIP36.57■■■■□ 3.44
C19orf54-205ENST00000596809 IQGAP2Q13576 1575 aa36.57■■■■□ 3.44
C19orf54-205ENST00000596809 CARMIL2Q6F5E8 1435 aa36.56■■■■□ 3.44
C19orf54-205ENST00000596809 PTPRGP23470 1445 aa36.53■■■■□ 3.44
C19orf54-205ENST00000596809 TTBK1Q5TCY1 1321 aaPredicted RBP36.49■■■■□ 3.43
C19orf54-205ENST00000596809 TNIKQ9UKE5 1360 aa36.49■■■■□ 3.43
C19orf54-205ENST00000596809 ADCY10Q96PN6 1610 aa36.46■■■■□ 3.43
C19orf54-205ENST00000596809 DISP1Q96F81 1524 aa36.41■■■■□ 3.42
C19orf54-205ENST00000596809 PRXQ9BXM0 1461 aa36.41■■■■□ 3.42
C19orf54-205ENST00000596809 UGGT2Q9NYU1 1516 aa36.39■■■■□ 3.42
C19orf54-205ENST00000596809 MAPKBP1O60336 1514 aa36.35■■■■□ 3.41
C19orf54-205ENST00000596809 FAM69CQ0P6D2 419 aa36.33■■■■□ 3.41
C19orf54-205ENST00000596809 CSRNP3Q8WYN3 585 aa36.32■■■■□ 3.4
C19orf54-205ENST00000596809 ABCC10Q5T3U5 1492 aa36.31■■■■□ 3.4
C19orf54-205ENST00000596809 KIF13AQ9H1H9 1805 aa36.27■■■■□ 3.4
C19orf54-205ENST00000596809 UACAQ9BZF9 1416 aa36.25■■■■□ 3.39
C19orf54-205ENST00000596809 ABCC2Q92887 1545 aa36.23■■■■□ 3.39
C19orf54-205ENST00000596809 KIAA0556O60303 1618 aa36.23■■■■□ 3.39
C19orf54-205ENST00000596809 UHRF1BP1LA0JNW5 1464 aa36.22■■■■□ 3.39
C19orf54-205ENST00000596809 CTTNBP2Q8WZ74 1663 aa36.21■■■■□ 3.39
C19orf54-205ENST00000596809 EEA1Q15075 1411 aa36.17■■■■□ 3.38
C19orf54-205ENST00000596809 DIP2BQ9P265 1576 aa36.16■■■■□ 3.38
C19orf54-205ENST00000596809 GOLGA3Q08378 1498 aa36.15■■■■□ 3.38
C19orf54-205ENST00000596809 FAM9AQ8IZU1 332 aaPredicted RBP36.09■■■■□ 3.37
C19orf54-205ENST00000596809 ASXL2Q76L83 1435 aa36.08■■■■□ 3.37
C19orf54-205ENST00000596809 PLB1Q6P1J6 1458 aa36.05■■■■□ 3.36
C19orf54-205ENST00000596809 KDM5BQ9UGL1 1544 aa36.04■■■■□ 3.36
C19orf54-205ENST00000596809 CHIC1Q5VXU3 224 aa36.03■■■■□ 3.36
C19orf54-205ENST00000596809 P3H3Q8IVL6 736 aa35.96■■■■□ 3.35
C19orf54-205ENST00000596809 ZCCHC11Q5TAX3 1644 aaKnown RBP35.9■■■■□ 3.34
C19orf54-205ENST00000596809 ABCA8O94911 1581 aa35.89■■■■□ 3.34
C19orf54-205ENST00000596809 GLI2P10070 1586 aa35.88■■■■□ 3.33
C19orf54-205ENST00000596809 EPRSP07814 1512 aaKnown RBP35.84■■■■□ 3.33
C19orf54-205ENST00000596809 TSPOAP1O95153 1857 aa35.84■■■■□ 3.33
C19orf54-205ENST00000596809 RANGAP1P46060 587 aaPredicted RBP35.82■■■■□ 3.32
C19orf54-205ENST00000596809 SAMD9Q5K651 1589 aa35.78■■■■□ 3.32
C19orf54-205ENST00000596809 WDR7Q9Y4E6 1490 aa35.78■■■■□ 3.32
C19orf54-205ENST00000596809 KIF21BO75037 1637 aa35.77■■■■□ 3.32
C19orf54-205ENST00000596809 KDM6BO15054 1643 aa35.74■■■■□ 3.31
C19orf54-205ENST00000596809 KCNH8Q96L42 1107 aa35.71■■■■□ 3.31
C19orf54-205ENST00000596809 ARID3CA6NKF2 412 aa35.7■■■■□ 3.31
C19orf54-205ENST00000596809 AEBP2Q6ZN18 517 aaPredicted RBP35.69■■■■□ 3.3
C19orf54-205ENST00000596809 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
C19orf54-205ENST00000596809 PPRC1Q5VV67 1664 aaKnown RBP35.67■■■■□ 3.3
C19orf54-205ENST00000596809 MAP3K4Q9Y6R4 1608 aa35.66■■■■□ 3.3
C19orf54-205ENST00000596809 ATP10BO94823 1461 aa35.66■■■■□ 3.3
C19orf54-205ENST00000596809 UBTFP17480 764 aaKnown RBP35.64■■■■□ 3.3
C19orf54-205ENST00000596809 FHOD3Q2V2M9 1422 aa35.63■■■■□ 3.29
C19orf54-205ENST00000596809 TEX14Q8IWB6 1497 aa35.6■■■■□ 3.29
C19orf54-205ENST00000596809 RAPGEF6Q8TEU7 1601 aa35.56■■■■□ 3.28
C19orf54-205ENST00000596809 CD109Q6YHK3 1445 aa35.56■■■■□ 3.28
C19orf54-205ENST00000596809 EFCAB5A4FU69 1503 aa35.53■■■■□ 3.28
C19orf54-205ENST00000596809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.53■■■■□ 3.28
C19orf54-205ENST00000596809 HNRNPUL2Q1KMD3 747 aaKnown RBP35.53■■■■□ 3.28
C19orf54-205ENST00000596809 COL17A1Q9UMD9 1497 aaPredicted RBP35.52■■■■□ 3.28
C19orf54-205ENST00000596809 NUP153P49790 1475 aaKnown RBP35.48■■■■□ 3.27
C19orf54-205ENST00000596809 MAGI3Q5TCQ9 1506 aa35.47■■■■□ 3.27
C19orf54-205ENST00000596809 CFAP43Q8NDM7 1665 aa35.45■■■■□ 3.27
C19orf54-205ENST00000596809 PLEKHD1A6NEE1 506 aa35.36■■■■□ 3.25
C19orf54-205ENST00000596809 ARHGAP35Q9NRY4 1499 aa35.33■■■■□ 3.25
C19orf54-205ENST00000596809 KDM4FA0A1W2PPD8 638 aa35.31■■■■□ 3.24
C19orf54-205ENST00000596809 ABCA9Q8IUA7 1624 aa35.29■■■■□ 3.24
C19orf54-205ENST00000596809 FMN1Q68DA7 1419 aa35.27■■■■□ 3.24
C19orf54-205ENST00000596809 ATP1B4Q9UN42 357 aaPredicted RBP35.24■■■■□ 3.23
C19orf54-205ENST00000596809 PHLDB1Q86UU1 1377 aa35.21■■■■□ 3.23
C19orf54-205ENST00000596809 ARAP3Q8WWN8 1544 aa35.19■■■■□ 3.22
C19orf54-205ENST00000596809 CDK13Q14004 1512 aaKnown RBP35.17■■■■□ 3.22
C19orf54-205ENST00000596809 NEO1Q92859 1461 aa35.12■■■■□ 3.21
C19orf54-205ENST00000596809 HECW1Q76N89 1606 aa35.1■■■■□ 3.21
C19orf54-205ENST00000596809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.07■■■■□ 3.21
C19orf54-205ENST00000596809 RAPGEF3O95398 923 aa35.07■■■■□ 3.2
C19orf54-205ENST00000596809 CDK11AQ9UQ88 783 aaPredicted RBP35.07■■■■□ 3.2
C19orf54-205ENST00000596809 ADGRL1O94910 1474 aa35.06■■■■□ 3.2
C19orf54-205ENST00000596809 TTC37Q6PGP7 1564 aa34.97■■■■□ 3.19
C19orf54-205ENST00000596809 AKNAQ7Z591 1439 aa34.97■■■■□ 3.19
C19orf54-205ENST00000596809 FANCAO15360 1455 aa34.97■■■■□ 3.19
C19orf54-205ENST00000596809 CLIP1P30622 1438 aa34.95■■■■□ 3.19
C19orf54-205ENST00000596809 CASKIN1Q8WXD9 1431 aa34.94■■■■□ 3.18
C19orf54-205ENST00000596809 PLCH2O75038 1416 aa34.91■■■■□ 3.18
C19orf54-205ENST00000596809 DENND4BO75064 1496 aaPredicted RBP34.9■■■■□ 3.18
C19orf54-205ENST00000596809 TROQ12816 1431 aaPredicted RBP34.89■■■■□ 3.18
C19orf54-205ENST00000596809 FRMPD1Q5SYB0 1578 aa34.86■■■■□ 3.17
C19orf54-205ENST00000596809 CFAP74Q9C0B2 1584 aa34.86■■■■□ 3.17
C19orf54-205ENST00000596809 PCF11O94913 1555 aaKnown RBP34.85■■■■□ 3.17
C19orf54-205ENST00000596809 LRRIQ1Q96JM4 1722 aa34.83■■■■□ 3.17
C19orf54-205ENST00000596809 EFCAB2Q5VUJ9 269 aa34.82■■■■□ 3.16
C19orf54-205ENST00000596809 CCDC18Q5T9S5 1454 aa34.82■■■■□ 3.16
C19orf54-205ENST00000596809 KIF14Q15058 1648 aa34.79■■■■□ 3.16
C19orf54-205ENST00000596809 FYCO1Q9BQS8 1478 aa34.78■■■■□ 3.16
C19orf54-205ENST00000596809 SCAPERQ9BY12 1400 aa34.77■■■■□ 3.16
C19orf54-205ENST00000596809 RICTORQ6R327 1708 aa34.74■■■■□ 3.15
C19orf54-205ENST00000596809 MYO5CQ9NQX4 1742 aa34.71■■■■□ 3.15
C19orf54-205ENST00000596809 ARID4BQ4LE39 1312 aaPredicted RBP34.7■■■■□ 3.15
C19orf54-205ENST00000596809 POGZQ7Z3K3 1410 aa34.66■■■■□ 3.14
C19orf54-205ENST00000596809 ARHGAP5Q13017 1502 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms