RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
CHMP2A-202ENST00000596708 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHMP2A-202ENST00000596708 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
CHMP2A-202ENST00000596708 CUL7Q14999 1698 aa18.47■□□□□ 0.55
CHMP2A-202ENST00000596708 IGF1RP08069 1367 aa18.46■□□□□ 0.55
CHMP2A-202ENST00000596708 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
CHMP2A-202ENST00000596708 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
CHMP2A-202ENST00000596708 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.53
CHMP2A-202ENST00000596708 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
CHMP2A-202ENST00000596708 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
CHMP2A-202ENST00000596708 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
CHMP2A-202ENST00000596708 ABCC10Q5T3U5 1492 aa18.36■□□□□ 0.53
CHMP2A-202ENST00000596708 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
CHMP2A-202ENST00000596708 DIP2BQ9P265 1576 aa18.33■□□□□ 0.52
CHMP2A-202ENST00000596708 PTPRGP23470 1445 aa18.31■□□□□ 0.52
CHMP2A-202ENST00000596708 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
CHMP2A-202ENST00000596708 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
CHMP2A-202ENST00000596708 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
CHMP2A-202ENST00000596708 KDM6BO15054 1643 aa18.23■□□□□ 0.51
CHMP2A-202ENST00000596708 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
CHMP2A-202ENST00000596708 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
CHMP2A-202ENST00000596708 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
CHMP2A-202ENST00000596708 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
CHMP2A-202ENST00000596708 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
CHMP2A-202ENST00000596708 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.5
CHMP2A-202ENST00000596708 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
CHMP2A-202ENST00000596708 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
CHMP2A-202ENST00000596708 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
CHMP2A-202ENST00000596708 GLI2P10070 1586 aa18.11■□□□□ 0.49
CHMP2A-202ENST00000596708 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
CHMP2A-202ENST00000596708 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
CHMP2A-202ENST00000596708 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
CHMP2A-202ENST00000596708 KDM5BQ9UGL1 1544 aa18.06■□□□□ 0.48
CHMP2A-202ENST00000596708 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
CHMP2A-202ENST00000596708 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
CHMP2A-202ENST00000596708 MAP3K4Q9Y6R4 1608 aa18.02■□□□□ 0.48
CHMP2A-202ENST00000596708 GOLGA3Q08378 1498 aa18■□□□□ 0.47
CHMP2A-202ENST00000596708 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
CHMP2A-202ENST00000596708 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
CHMP2A-202ENST00000596708 KCNH8Q96L42 1107 aa17.94■□□□□ 0.46
CHMP2A-202ENST00000596708 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
CHMP2A-202ENST00000596708 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
CHMP2A-202ENST00000596708 ABCA8O94911 1581 aa17.93■□□□□ 0.46
CHMP2A-202ENST00000596708 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
CHMP2A-202ENST00000596708 CFAP43Q8NDM7 1665 aa17.91■□□□□ 0.46
CHMP2A-202ENST00000596708 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
CHMP2A-202ENST00000596708 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
CHMP2A-202ENST00000596708 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
CHMP2A-202ENST00000596708 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
CHMP2A-202ENST00000596708 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
CHMP2A-202ENST00000596708 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
CHMP2A-202ENST00000596708 ATP10BO94823 1461 aa17.78■□□□□ 0.44
CHMP2A-202ENST00000596708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
CHMP2A-202ENST00000596708 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.44
CHMP2A-202ENST00000596708 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
CHMP2A-202ENST00000596708 SAMD9Q5K651 1589 aa17.77■□□□□ 0.44
CHMP2A-202ENST00000596708 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
CHMP2A-202ENST00000596708 KIF21BO75037 1637 aa17.72■□□□□ 0.43
CHMP2A-202ENST00000596708 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
CHMP2A-202ENST00000596708 EEA1Q15075 1411 aa17.72■□□□□ 0.43
CHMP2A-202ENST00000596708 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
CHMP2A-202ENST00000596708 HECW2Q9P2P5 1572 aa17.68■□□□□ 0.42
CHMP2A-202ENST00000596708 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
CHMP2A-202ENST00000596708 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
CHMP2A-202ENST00000596708 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
CHMP2A-202ENST00000596708 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
CHMP2A-202ENST00000596708 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
CHMP2A-202ENST00000596708 NEO1Q92859 1461 aa17.62■□□□□ 0.41
CHMP2A-202ENST00000596708 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
CHMP2A-202ENST00000596708 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
CHMP2A-202ENST00000596708 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
CHMP2A-202ENST00000596708 ARID4BQ4LE39 1312 aaPredicted RBP17.56■□□□□ 0.4
CHMP2A-202ENST00000596708 ADAMTSL3P82987 1691 aa17.56■□□□□ 0.4
CHMP2A-202ENST00000596708 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
CHMP2A-202ENST00000596708 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
CHMP2A-202ENST00000596708 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
CHMP2A-202ENST00000596708 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
CHMP2A-202ENST00000596708 CFAP74Q9C0B2 1584 aa17.53■□□□□ 0.4
CHMP2A-202ENST00000596708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.4
CHMP2A-202ENST00000596708 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
CHMP2A-202ENST00000596708 AKNAQ7Z591 1439 aa17.52■□□□□ 0.4
CHMP2A-202ENST00000596708 DENND4BO75064 1496 aaPredicted RBP17.51■□□□□ 0.39
CHMP2A-202ENST00000596708 FANCAO15360 1455 aa17.5■□□□□ 0.39
CHMP2A-202ENST00000596708 PTPRMP28827 1452 aa17.5■□□□□ 0.39
CHMP2A-202ENST00000596708 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
CHMP2A-202ENST00000596708 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
CHMP2A-202ENST00000596708 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
CHMP2A-202ENST00000596708 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-202ENST00000596708 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
CHMP2A-202ENST00000596708 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
CHMP2A-202ENST00000596708 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
CHMP2A-202ENST00000596708 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
CHMP2A-202ENST00000596708 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
CHMP2A-202ENST00000596708 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
CHMP2A-202ENST00000596708 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
CHMP2A-202ENST00000596708 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
CHMP2A-202ENST00000596708 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
CHMP2A-202ENST00000596708 PLCH2O75038 1416 aa17.4■□□□□ 0.38
CHMP2A-202ENST00000596708 POGZQ7Z3K3 1410 aa17.4■□□□□ 0.38
CHMP2A-202ENST00000596708 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms