RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 IGF1RP08069 1367 aa27.45■■□□□ 1.98
PSMC4-204ENST00000596386 CUL7Q14999 1698 aa27.43■■□□□ 1.98
PSMC4-204ENST00000596386 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
PSMC4-204ENST00000596386 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.95
PSMC4-204ENST00000596386 KIF13AQ9H1H9 1805 aa27.23■■□□□ 1.95
PSMC4-204ENST00000596386 ADCY10Q96PN6 1610 aa27.2■■□□□ 1.95
PSMC4-204ENST00000596386 MAPKBP1O60336 1514 aa27.17■■□□□ 1.94
PSMC4-204ENST00000596386 NPM1P06748 294 aaKnown RBP eCLIP27.14■■□□□ 1.94
PSMC4-204ENST00000596386 ABCC10Q5T3U5 1492 aa27.12■■□□□ 1.93
PSMC4-204ENST00000596386 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
PSMC4-204ENST00000596386 PTPRGP23470 1445 aa27.07■■□□□ 1.92
PSMC4-204ENST00000596386 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
PSMC4-204ENST00000596386 DIP2BQ9P265 1576 aa27.07■■□□□ 1.92
PSMC4-204ENST00000596386 FAM69CQ0P6D2 419 aa27.05■■□□□ 1.92
PSMC4-204ENST00000596386 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
PSMC4-204ENST00000596386 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
PSMC4-204ENST00000596386 DISP1Q96F81 1524 aa26.97■■□□□ 1.91
PSMC4-204ENST00000596386 ABCC2Q92887 1545 aa26.95■■□□□ 1.91
PSMC4-204ENST00000596386 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.91
PSMC4-204ENST00000596386 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.9
PSMC4-204ENST00000596386 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
PSMC4-204ENST00000596386 UHRF1BP1LA0JNW5 1464 aa26.92■■□□□ 1.9
PSMC4-204ENST00000596386 UACAQ9BZF9 1416 aa26.89■■□□□ 1.89
PSMC4-204ENST00000596386 KIAA0556O60303 1618 aa26.87■■□□□ 1.89
PSMC4-204ENST00000596386 ASXL2Q76L83 1435 aa26.84■■□□□ 1.89
PSMC4-204ENST00000596386 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
PSMC4-204ENST00000596386 TSPOAP1O95153 1857 aa26.83■■□□□ 1.88
PSMC4-204ENST00000596386 PLB1Q6P1J6 1458 aa26.82■■□□□ 1.88
PSMC4-204ENST00000596386 KDM6BO15054 1643 aa26.8■■□□□ 1.88
PSMC4-204ENST00000596386 PRXQ9BXM0 1461 aa26.8■■□□□ 1.88
PSMC4-204ENST00000596386 KDM5BQ9UGL1 1544 aa26.79■■□□□ 1.88
PSMC4-204ENST00000596386 GLI2P10070 1586 aa26.78■■□□□ 1.88
PSMC4-204ENST00000596386 ZCCHC11Q5TAX3 1644 aaKnown RBP26.73■■□□□ 1.87
PSMC4-204ENST00000596386 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
PSMC4-204ENST00000596386 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.87
PSMC4-204ENST00000596386 EPRSP07814 1512 aaKnown RBP26.68■■□□□ 1.86
PSMC4-204ENST00000596386 MAP3K4Q9Y6R4 1608 aa26.64■■□□□ 1.85
PSMC4-204ENST00000596386 ABCA8O94911 1581 aa26.62■■□□□ 1.85
PSMC4-204ENST00000596386 WDR7Q9Y4E6 1490 aa26.61■■□□□ 1.85
PSMC4-204ENST00000596386 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
PSMC4-204ENST00000596386 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
PSMC4-204ENST00000596386 COL17A1Q9UMD9 1497 aaPredicted RBP26.49■■□□□ 1.83
PSMC4-204ENST00000596386 EEA1Q15075 1411 aa26.49■■□□□ 1.83
PSMC4-204ENST00000596386 SAMD9Q5K651 1589 aa26.47■■□□□ 1.83
PSMC4-204ENST00000596386 KDM4FA0A1W2PPD8 638 aa26.47■■□□□ 1.83
PSMC4-204ENST00000596386 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
PSMC4-204ENST00000596386 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
PSMC4-204ENST00000596386 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
PSMC4-204ENST00000596386 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
PSMC4-204ENST00000596386 MAGI3Q5TCQ9 1506 aa26.41■■□□□ 1.82
PSMC4-204ENST00000596386 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
PSMC4-204ENST00000596386 ATP10BO94823 1461 aa26.37■■□□□ 1.81
PSMC4-204ENST00000596386 RAPGEF6Q8TEU7 1601 aa26.34■■□□□ 1.81
PSMC4-204ENST00000596386 ARID3CA6NKF2 412 aa26.33■■□□□ 1.81
PSMC4-204ENST00000596386 ADGRL1O94910 1474 aa26.31■■□□□ 1.8
PSMC4-204ENST00000596386 KIF21BO75037 1637 aa26.29■■□□□ 1.8
PSMC4-204ENST00000596386 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
PSMC4-204ENST00000596386 ABCA9Q8IUA7 1624 aa26.25■■□□□ 1.79
PSMC4-204ENST00000596386 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
PSMC4-204ENST00000596386 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
PSMC4-204ENST00000596386 EFCAB5A4FU69 1503 aa26.21■■□□□ 1.79
PSMC4-204ENST00000596386 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.79
PSMC4-204ENST00000596386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.17■■□□□ 1.78
PSMC4-204ENST00000596386 HNRNPUL2Q1KMD3 747 aaKnown RBP26.17■■□□□ 1.78
PSMC4-204ENST00000596386 PHLDB1Q86UU1 1377 aa26.15■■□□□ 1.78
PSMC4-204ENST00000596386 NEO1Q92859 1461 aa26.11■■□□□ 1.77
PSMC4-204ENST00000596386 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
PSMC4-204ENST00000596386 PLEKHD1A6NEE1 506 aa26.05■■□□□ 1.76
PSMC4-204ENST00000596386 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
PSMC4-204ENST00000596386 FRMPD1Q5SYB0 1578 aa26■■□□□ 1.75
PSMC4-204ENST00000596386 RAPGEF3O95398 923 aa26■■□□□ 1.75
PSMC4-204ENST00000596386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.99■■□□□ 1.75
PSMC4-204ENST00000596386 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
PSMC4-204ENST00000596386 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
PSMC4-204ENST00000596386 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
PSMC4-204ENST00000596386 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
PSMC4-204ENST00000596386 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
PSMC4-204ENST00000596386 CFAP74Q9C0B2 1584 aa25.95■■□□□ 1.74
PSMC4-204ENST00000596386 HECW2Q9P2P5 1572 aa25.94■■□□□ 1.74
PSMC4-204ENST00000596386 FANCAO15360 1455 aa25.93■■□□□ 1.74
PSMC4-204ENST00000596386 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
PSMC4-204ENST00000596386 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
PSMC4-204ENST00000596386 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
PSMC4-204ENST00000596386 RICTORQ6R327 1708 aa25.9■■□□□ 1.74
PSMC4-204ENST00000596386 ARHGEF40Q8TER5 1519 aa25.88■■□□□ 1.73
PSMC4-204ENST00000596386 ADAMTSL3P82987 1691 aa25.87■■□□□ 1.73
PSMC4-204ENST00000596386 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
PSMC4-204ENST00000596386 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.72
PSMC4-204ENST00000596386 BCORL1Q5H9F3 1711 aa25.83■■□□□ 1.72
PSMC4-204ENST00000596386 PLCH2O75038 1416 aa25.82■■□□□ 1.72
PSMC4-204ENST00000596386 PTPRMP28827 1452 aa25.8■■□□□ 1.72
PSMC4-204ENST00000596386 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
PSMC4-204ENST00000596386 ARID4BQ4LE39 1312 aaPredicted RBP25.78■■□□□ 1.72
PSMC4-204ENST00000596386 KIF14Q15058 1648 aa25.77■■□□□ 1.72
PSMC4-204ENST00000596386 MYO5CQ9NQX4 1742 aa25.77■■□□□ 1.72
PSMC4-204ENST00000596386 TROQ12816 1431 aaPredicted RBP25.76■■□□□ 1.71
PSMC4-204ENST00000596386 MADDQ8WXG6 1647 aa25.76■■□□□ 1.71
PSMC4-204ENST00000596386 LRRIQ1Q96JM4 1722 aa25.75■■□□□ 1.71
PSMC4-204ENST00000596386 ZFYVE16Q7Z3T8 1539 aa25.75■■□□□ 1.71
PSMC4-204ENST00000596386 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms