RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-208ENST00000596365 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
LINC00649-208ENST00000596365 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
LINC00649-208ENST00000596365 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
LINC00649-208ENST00000596365 CUX1P39880 1505 aa15.91■□□□□ 0.14
LINC00649-208ENST00000596365 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
LINC00649-208ENST00000596365 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
LINC00649-208ENST00000596365 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
LINC00649-208ENST00000596365 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
LINC00649-208ENST00000596365 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
LINC00649-208ENST00000596365 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
LINC00649-208ENST00000596365 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
LINC00649-208ENST00000596365 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
LINC00649-208ENST00000596365 NUP160Q12769 1436 aa15.78■□□□□ 0.12
LINC00649-208ENST00000596365 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
LINC00649-208ENST00000596365 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
LINC00649-208ENST00000596365 ABCC10Q5T3U5 1492 aa15.73■□□□□ 0.11
LINC00649-208ENST00000596365 FAM69CQ0P6D2 419 aa15.73■□□□□ 0.11
LINC00649-208ENST00000596365 KDM6BO15054 1643 aa15.72■□□□□ 0.11
LINC00649-208ENST00000596365 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
LINC00649-208ENST00000596365 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
LINC00649-208ENST00000596365 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
LINC00649-208ENST00000596365 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
LINC00649-208ENST00000596365 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
LINC00649-208ENST00000596365 TSPOAP1O95153 1857 aa15.66■□□□□ 0.1
LINC00649-208ENST00000596365 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
LINC00649-208ENST00000596365 JPH4Q96JJ6 628 aa15.62■□□□□ 0.09
LINC00649-208ENST00000596365 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
LINC00649-208ENST00000596365 ADCY10Q96PN6 1610 aa15.6■□□□□ 0.09
LINC00649-208ENST00000596365 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
LINC00649-208ENST00000596365 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
LINC00649-208ENST00000596365 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
LINC00649-208ENST00000596365 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
LINC00649-208ENST00000596365 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
LINC00649-208ENST00000596365 PPRC1Q5VV67 1664 aaKnown RBP15.45■□□□□ 0.06
LINC00649-208ENST00000596365 GLI2P10070 1586 aa15.41■□□□□ 0.06
LINC00649-208ENST00000596365 KIAA0586Q9BVV6 1533 aa15.41■□□□□ 0.06
LINC00649-208ENST00000596365 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
LINC00649-208ENST00000596365 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
LINC00649-208ENST00000596365 PTPRGP23470 1445 aa15.36■□□□□ 0.05
LINC00649-208ENST00000596365 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
LINC00649-208ENST00000596365 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
LINC00649-208ENST00000596365 CUL7Q14999 1698 aa15.35■□□□□ 0.05
LINC00649-208ENST00000596365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC00649-208ENST00000596365 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
LINC00649-208ENST00000596365 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
LINC00649-208ENST00000596365 TEX14Q8IWB6 1497 aa15.32■□□□□ 0.04
LINC00649-208ENST00000596365 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
LINC00649-208ENST00000596365 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
LINC00649-208ENST00000596365 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
LINC00649-208ENST00000596365 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
LINC00649-208ENST00000596365 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
LINC00649-208ENST00000596365 EPRSP07814 1512 aaKnown RBP15.27■□□□□ 0.03
LINC00649-208ENST00000596365 IGF1RP08069 1367 aa15.24■□□□□ 0.03
LINC00649-208ENST00000596365 UACAQ9BZF9 1416 aa15.23■□□□□ 0.03
LINC00649-208ENST00000596365 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
LINC00649-208ENST00000596365 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.02
LINC00649-208ENST00000596365 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
LINC00649-208ENST00000596365 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
LINC00649-208ENST00000596365 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
LINC00649-208ENST00000596365 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
LINC00649-208ENST00000596365 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
LINC00649-208ENST00000596365 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
LINC00649-208ENST00000596365 KIF21BO75037 1637 aa15.15■□□□□ 0.02
LINC00649-208ENST00000596365 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
LINC00649-208ENST00000596365 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
LINC00649-208ENST00000596365 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
LINC00649-208ENST00000596365 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
LINC00649-208ENST00000596365 WDR7Q9Y4E6 1490 aa15.13■□□□□ 0.01
LINC00649-208ENST00000596365 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
LINC00649-208ENST00000596365 LMTK3Q96Q04 1460 aa15.11■□□□□ 0.01
LINC00649-208ENST00000596365 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
LINC00649-208ENST00000596365 PTPRMP28827 1452 aa15.07■□□□□ 0
LINC00649-208ENST00000596365 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
LINC00649-208ENST00000596365 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
LINC00649-208ENST00000596365 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
LINC00649-208ENST00000596365 KIAA0556O60303 1618 aa15.06■□□□□ 0
LINC00649-208ENST00000596365 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
LINC00649-208ENST00000596365 ARAP3Q8WWN8 1544 aa15.02■□□□□ -0
LINC00649-208ENST00000596365 KCNH8Q96L42 1107 aa15.02■□□□□ -0
LINC00649-208ENST00000596365 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
LINC00649-208ENST00000596365 MADDQ8WXG6 1647 aa14.96□□□□□ -0.01
LINC00649-208ENST00000596365 ABCA8O94911 1581 aa14.95□□□□□ -0.02
LINC00649-208ENST00000596365 SOCS7O14512 581 aa14.95□□□□□ -0.02
LINC00649-208ENST00000596365 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
LINC00649-208ENST00000596365 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
LINC00649-208ENST00000596365 CTTNBP2Q8WZ74 1663 aa14.93□□□□□ -0.02
LINC00649-208ENST00000596365 CERKQ8TCT0 537 aa14.92□□□□□ -0.02
LINC00649-208ENST00000596365 GOLGA3Q08378 1498 aa14.92□□□□□ -0.02
LINC00649-208ENST00000596365 RIMS1Q86UR5 1692 aaKnown RBP14.91□□□□□ -0.02
LINC00649-208ENST00000596365 DISP3Q9P2K9 1392 aa14.91□□□□□ -0.02
LINC00649-208ENST00000596365 ILDR2Q71H61 639 aa14.9□□□□□ -0.02
LINC00649-208ENST00000596365 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
LINC00649-208ENST00000596365 ABCA9Q8IUA7 1624 aa14.89□□□□□ -0.03
LINC00649-208ENST00000596365 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
LINC00649-208ENST00000596365 HSPA2P54652 639 aa14.86□□□□□ -0.03
LINC00649-208ENST00000596365 NEO1Q92859 1461 aa14.86□□□□□ -0.03
LINC00649-208ENST00000596365 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
LINC00649-208ENST00000596365 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
LINC00649-208ENST00000596365 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
LINC00649-208ENST00000596365 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms