RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 CARMIL1Q5VZK9 1371 aa27.49■■□□□ 1.99
IRF3-210ENST00000595240 PRG4Q92954 1404 aaPredicted RBP27.48■■□□□ 1.99
IRF3-210ENST00000595240 KIAA0586Q9BVV6 1533 aa27.45■■□□□ 1.98
IRF3-210ENST00000595240 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
IRF3-210ENST00000595240 RAPGEF2Q9Y4G8 1499 aa27.29■■□□□ 1.96
IRF3-210ENST00000595240 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
IRF3-210ENST00000595240 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
IRF3-210ENST00000595240 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
IRF3-210ENST00000595240 PTPRGP23470 1445 aa27.11■■□□□ 1.93
IRF3-210ENST00000595240 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
IRF3-210ENST00000595240 ADCY10Q96PN6 1610 aa27.09■■□□□ 1.93
IRF3-210ENST00000595240 DISP1Q96F81 1524 aa27.08■■□□□ 1.93
IRF3-210ENST00000595240 UGGT2Q9NYU1 1516 aa27.08■■□□□ 1.93
IRF3-210ENST00000595240 NPM1P06748 294 aaKnown RBP eCLIP27.05■■□□□ 1.92
IRF3-210ENST00000595240 CSRNP3Q8WYN3 585 aa27.01■■□□□ 1.91
IRF3-210ENST00000595240 MAPKBP1O60336 1514 aa27■■□□□ 1.91
IRF3-210ENST00000595240 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
IRF3-210ENST00000595240 EEA1Q15075 1411 aa26.98■■□□□ 1.91
IRF3-210ENST00000595240 CTTNBP2Q8WZ74 1663 aa26.96■■□□□ 1.91
IRF3-210ENST00000595240 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
IRF3-210ENST00000595240 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
IRF3-210ENST00000595240 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
IRF3-210ENST00000595240 UACAQ9BZF9 1416 aa26.91■■□□□ 1.9
IRF3-210ENST00000595240 ABCC2Q92887 1545 aa26.91■■□□□ 1.9
IRF3-210ENST00000595240 KIF13AQ9H1H9 1805 aa26.9■■□□□ 1.9
IRF3-210ENST00000595240 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
IRF3-210ENST00000595240 FAM69CQ0P6D2 419 aa26.88■■□□□ 1.89
IRF3-210ENST00000595240 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
IRF3-210ENST00000595240 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
IRF3-210ENST00000595240 FAM9AQ8IZU1 332 aaPredicted RBP26.81■■□□□ 1.88
IRF3-210ENST00000595240 KDM5BQ9UGL1 1544 aa26.79■■□□□ 1.88
IRF3-210ENST00000595240 ASXL2Q76L83 1435 aa26.78■■□□□ 1.88
IRF3-210ENST00000595240 PLB1Q6P1J6 1458 aa26.76■■□□□ 1.87
IRF3-210ENST00000595240 ABCA8O94911 1581 aa26.7■■□□□ 1.86
IRF3-210ENST00000595240 KIF21BO75037 1637 aa26.69■■□□□ 1.86
IRF3-210ENST00000595240 ZCCHC11Q5TAX3 1644 aaKnown RBP26.68■■□□□ 1.86
IRF3-210ENST00000595240 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
IRF3-210ENST00000595240 P3H3Q8IVL6 736 aa26.66■■□□□ 1.86
IRF3-210ENST00000595240 GLI2P10070 1586 aa26.65■■□□□ 1.86
IRF3-210ENST00000595240 EPRSP07814 1512 aaKnown RBP26.61■■□□□ 1.85
IRF3-210ENST00000595240 WDR7Q9Y4E6 1490 aa26.58■■□□□ 1.85
IRF3-210ENST00000595240 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
IRF3-210ENST00000595240 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
IRF3-210ENST00000595240 FHOD3Q2V2M9 1422 aa26.51■■□□□ 1.83
IRF3-210ENST00000595240 EFCAB5A4FU69 1503 aa26.49■■□□□ 1.83
IRF3-210ENST00000595240 ATP10BO94823 1461 aa26.49■■□□□ 1.83
IRF3-210ENST00000595240 PPRC1Q5VV67 1664 aaKnown RBP26.49■■□□□ 1.83
IRF3-210ENST00000595240 KDM6BO15054 1643 aa26.49■■□□□ 1.83
IRF3-210ENST00000595240 MAP3K4Q9Y6R4 1608 aa26.49■■□□□ 1.83
IRF3-210ENST00000595240 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
IRF3-210ENST00000595240 EHMT2Q96KQ7 1210 aa26.47■■□□□ 1.83
IRF3-210ENST00000595240 ARID3CA6NKF2 412 aa26.46■■□□□ 1.83
IRF3-210ENST00000595240 RAPGEF6Q8TEU7 1601 aa26.46■■□□□ 1.83
IRF3-210ENST00000595240 KCNH8Q96L42 1107 aa26.43■■□□□ 1.82
IRF3-210ENST00000595240 TEX14Q8IWB6 1497 aa26.42■■□□□ 1.82
IRF3-210ENST00000595240 NUP153P49790 1475 aaKnown RBP26.41■■□□□ 1.82
IRF3-210ENST00000595240 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
IRF3-210ENST00000595240 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
IRF3-210ENST00000595240 COL17A1Q9UMD9 1497 aaPredicted RBP26.34■■□□□ 1.81
IRF3-210ENST00000595240 CFAP43Q8NDM7 1665 aa26.34■■□□□ 1.81
IRF3-210ENST00000595240 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
IRF3-210ENST00000595240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.31■■□□□ 1.8
IRF3-210ENST00000595240 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
IRF3-210ENST00000595240 FMN1Q68DA7 1419 aa26.26■■□□□ 1.79
IRF3-210ENST00000595240 AEBP2Q6ZN18 517 aaPredicted RBP26.25■■□□□ 1.79
IRF3-210ENST00000595240 ABCA9Q8IUA7 1624 aa26.25■■□□□ 1.79
IRF3-210ENST00000595240 PLEKHD1A6NEE1 506 aa26.22■■□□□ 1.79
IRF3-210ENST00000595240 CDK13Q14004 1512 aaKnown RBP26.17■■□□□ 1.78
IRF3-210ENST00000595240 HECW1Q76N89 1606 aa26.14■■□□□ 1.77
IRF3-210ENST00000595240 ARAP3Q8WWN8 1544 aa26.14■■□□□ 1.77
IRF3-210ENST00000595240 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
IRF3-210ENST00000595240 ATP1B4Q9UN42 357 aaPredicted RBP26.11■■□□□ 1.77
IRF3-210ENST00000595240 KDM4FA0A1W2PPD8 638 aa26.1■■□□□ 1.77
IRF3-210ENST00000595240 NEO1Q92859 1461 aa26.1■■□□□ 1.77
IRF3-210ENST00000595240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.08■■□□□ 1.77
IRF3-210ENST00000595240 CLIP1P30622 1438 aa26.05■■□□□ 1.76
IRF3-210ENST00000595240 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
IRF3-210ENST00000595240 CASKIN1Q8WXD9 1431 aa26.03■■□□□ 1.76
IRF3-210ENST00000595240 TTC37Q6PGP7 1564 aa26.03■■□□□ 1.76
IRF3-210ENST00000595240 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
IRF3-210ENST00000595240 RAPGEF3O95398 923 aa25.98■■□□□ 1.75
IRF3-210ENST00000595240 FANCAO15360 1455 aa25.98■■□□□ 1.75
IRF3-210ENST00000595240 ADGRL1O94910 1474 aa25.98■■□□□ 1.75
IRF3-210ENST00000595240 TROQ12816 1431 aaPredicted RBP25.97■■□□□ 1.75
IRF3-210ENST00000595240 AKNAQ7Z591 1439 aa25.96■■□□□ 1.75
IRF3-210ENST00000595240 LRRIQ1Q96JM4 1722 aa25.94■■□□□ 1.74
IRF3-210ENST00000595240 CCDC18Q5T9S5 1454 aa25.94■■□□□ 1.74
IRF3-210ENST00000595240 PLCH2O75038 1416 aa25.94■■□□□ 1.74
IRF3-210ENST00000595240 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
IRF3-210ENST00000595240 FRMPD1Q5SYB0 1578 aa25.92■■□□□ 1.74
IRF3-210ENST00000595240 CFAP74Q9C0B2 1584 aa25.92■■□□□ 1.74
IRF3-210ENST00000595240 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
IRF3-210ENST00000595240 KIF14Q15058 1648 aa25.9■■□□□ 1.74
IRF3-210ENST00000595240 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
IRF3-210ENST00000595240 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
IRF3-210ENST00000595240 RICTORQ6R327 1708 aa25.83■■□□□ 1.72
IRF3-210ENST00000595240 MYO5CQ9NQX4 1742 aa25.82■■□□□ 1.72
IRF3-210ENST00000595240 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
IRF3-210ENST00000595240 ZMYM4Q5VZL5 1548 aa25.78■■□□□ 1.72
IRF3-210ENST00000595240 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms