RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 KIAA0586Q9BVV6 1533 aa29.68■■■□□ 2.34
GTF2F1-205ENST00000595047 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
GTF2F1-205ENST00000595047 CLASP1Q7Z460 1538 aa29.63■■■□□ 2.33
GTF2F1-205ENST00000595047 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
GTF2F1-205ENST00000595047 IQGAP2Q13576 1575 aa29.55■■■□□ 2.32
GTF2F1-205ENST00000595047 TNIKQ9UKE5 1360 aa29.54■■■□□ 2.32
GTF2F1-205ENST00000595047 RANGAP1P46060 587 aaPredicted RBP29.52■■■□□ 2.32
GTF2F1-205ENST00000595047 CTTNBP2Q8WZ74 1663 aa29.49■■■□□ 2.31
GTF2F1-205ENST00000595047 PRG4Q92954 1404 aaPredicted RBP29.46■■■□□ 2.31
GTF2F1-205ENST00000595047 DNAJC5Q9H3Z4 198 aa29.42■■■□□ 2.3
GTF2F1-205ENST00000595047 UGGT2Q9NYU1 1516 aa29.42■■■□□ 2.3
GTF2F1-205ENST00000595047 SHROOM2Q13796 1616 aa29.41■■■□□ 2.3
GTF2F1-205ENST00000595047 CARMIL2Q6F5E8 1435 aa29.39■■■□□ 2.29
GTF2F1-205ENST00000595047 P3H3Q8IVL6 736 aa29.34■■■□□ 2.29
GTF2F1-205ENST00000595047 DISP1Q96F81 1524 aa29.33■■■□□ 2.29
GTF2F1-205ENST00000595047 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
GTF2F1-205ENST00000595047 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
GTF2F1-205ENST00000595047 CLIP1P30622 1438 aa29.29■■■□□ 2.28
GTF2F1-205ENST00000595047 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
GTF2F1-205ENST00000595047 TTBK1Q5TCY1 1321 aaPredicted RBP29.26■■■□□ 2.27
GTF2F1-205ENST00000595047 KIAA0556O60303 1618 aa29.25■■■□□ 2.27
GTF2F1-205ENST00000595047 EFCAB5A4FU69 1503 aa29.24■■■□□ 2.27
GTF2F1-205ENST00000595047 ARHGAP35Q9NRY4 1499 aa29.22■■■□□ 2.27
GTF2F1-205ENST00000595047 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
GTF2F1-205ENST00000595047 RIMBP3CA6NJZ7 1639 aa29.21■■■□□ 2.27
GTF2F1-205ENST00000595047 RIMBP3BA6NNM3 1639 aa29.21■■■□□ 2.27
GTF2F1-205ENST00000595047 RIMBP3Q9UFD9 1639 aa29.21■■■□□ 2.27
GTF2F1-205ENST00000595047 PTPRGP23470 1445 aa29.2■■■□□ 2.27
GTF2F1-205ENST00000595047 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.26
GTF2F1-205ENST00000595047 CYB5RLQ6IPT4 315 aa29.14■■■□□ 2.26
GTF2F1-205ENST00000595047 ARAP1Q96P48 1450 aa29.14■■■□□ 2.25
GTF2F1-205ENST00000595047 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
GTF2F1-205ENST00000595047 UACAQ9BZF9 1416 aa29■■■□□ 2.23
GTF2F1-205ENST00000595047 PLB1Q6P1J6 1458 aa28.98■■■□□ 2.23
GTF2F1-205ENST00000595047 ATP1B4Q9UN42 357 aaPredicted RBP28.94■■■□□ 2.22
GTF2F1-205ENST00000595047 ABCA8O94911 1581 aa28.91■■■□□ 2.22
GTF2F1-205ENST00000595047 UHRF1BP1LA0JNW5 1464 aa28.89■■■□□ 2.21
GTF2F1-205ENST00000595047 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
GTF2F1-205ENST00000595047 ABCC2Q92887 1545 aa28.88■■■□□ 2.21
GTF2F1-205ENST00000595047 ARID3CA6NKF2 412 aa28.86■■■□□ 2.21
GTF2F1-205ENST00000595047 NPM1P06748 294 aaKnown RBP eCLIP28.86■■■□□ 2.21
GTF2F1-205ENST00000595047 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
GTF2F1-205ENST00000595047 RAPGEF6Q8TEU7 1601 aa28.85■■■□□ 2.21
GTF2F1-205ENST00000595047 ADCY10Q96PN6 1610 aa28.82■■■□□ 2.2
GTF2F1-205ENST00000595047 NUP153P49790 1475 aaKnown RBP28.8■■■□□ 2.2
GTF2F1-205ENST00000595047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.79■■■□□ 2.2
GTF2F1-205ENST00000595047 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
GTF2F1-205ENST00000595047 FYCO1Q9BQS8 1478 aa28.79■■■□□ 2.2
GTF2F1-205ENST00000595047 PCF11O94913 1555 aaKnown RBP28.79■■■□□ 2.2
GTF2F1-205ENST00000595047 HECW1Q76N89 1606 aa28.75■■■□□ 2.19
GTF2F1-205ENST00000595047 KDM5BQ9UGL1 1544 aa28.75■■■□□ 2.19
GTF2F1-205ENST00000595047 ATP10BO94823 1461 aa28.74■■■□□ 2.19
GTF2F1-205ENST00000595047 EPRSP07814 1512 aaKnown RBP28.71■■■□□ 2.19
GTF2F1-205ENST00000595047 APLP2Q06481 763 aa28.68■■■□□ 2.18
GTF2F1-205ENST00000595047 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
GTF2F1-205ENST00000595047 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
GTF2F1-205ENST00000595047 CDK11AQ9UQ88 783 aaPredicted RBP28.64■■■□□ 2.18
GTF2F1-205ENST00000595047 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
GTF2F1-205ENST00000595047 ZCCHC11Q5TAX3 1644 aaKnown RBP28.63■■■□□ 2.17
GTF2F1-205ENST00000595047 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
GTF2F1-205ENST00000595047 MAPKBP1O60336 1514 aa28.54■■■□□ 2.16
GTF2F1-205ENST00000595047 KCNH8Q96L42 1107 aa28.52■■■□□ 2.16
GTF2F1-205ENST00000595047 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
GTF2F1-205ENST00000595047 MAP3K1Q13233 1512 aa28.51■■■□□ 2.16
GTF2F1-205ENST00000595047 WDR7Q9Y4E6 1490 aa28.51■■■□□ 2.15
GTF2F1-205ENST00000595047 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
GTF2F1-205ENST00000595047 TIAM1Q13009 1591 aa28.49■■■□□ 2.15
GTF2F1-205ENST00000595047 KANK4Q5T7N3 995 aaPredicted RBP28.48■■■□□ 2.15
GTF2F1-205ENST00000595047 TROQ12816 1431 aaPredicted RBP28.47■■■□□ 2.15
GTF2F1-205ENST00000595047 MAGI3Q5TCQ9 1506 aa28.43■■■□□ 2.14
GTF2F1-205ENST00000595047 CFAP43Q8NDM7 1665 aa28.42■■■□□ 2.14
GTF2F1-205ENST00000595047 LRRC9Q6ZRR7 1453 aa28.42■■■□□ 2.14
GTF2F1-205ENST00000595047 FAM69CQ0P6D2 419 aa28.41■■■□□ 2.14
GTF2F1-205ENST00000595047 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.14
GTF2F1-205ENST00000595047 TRHP20396 242 aaPredicted RBP28.38■■■□□ 2.13
GTF2F1-205ENST00000595047 PPARGC1BQ86YN6 1023 aaKnown RBP28.37■■■□□ 2.13
GTF2F1-205ENST00000595047 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
GTF2F1-205ENST00000595047 KIF14Q15058 1648 aa28.29■■■□□ 2.12
GTF2F1-205ENST00000595047 DIP2BQ9P265 1576 aa28.29■■■□□ 2.12
GTF2F1-205ENST00000595047 GLI2P10070 1586 aa28.27■■■□□ 2.12
GTF2F1-205ENST00000595047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.26■■■□□ 2.11
GTF2F1-205ENST00000595047 CD109Q6YHK3 1445 aa28.24■■■□□ 2.11
GTF2F1-205ENST00000595047 NCOA2Q15596 1464 aa28.24■■■□□ 2.11
GTF2F1-205ENST00000595047 CCNB3Q8WWL7 1395 aa28.23■■■□□ 2.11
GTF2F1-205ENST00000595047 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.11
GTF2F1-205ENST00000595047 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
GTF2F1-205ENST00000595047 TTC37Q6PGP7 1564 aa28.18■■■□□ 2.1
GTF2F1-205ENST00000595047 PLCH2O75038 1416 aa28.15■■■□□ 2.1
GTF2F1-205ENST00000595047 GPATCH8Q9UKJ3 1502 aaKnown RBP28.14■■■□□ 2.1
GTF2F1-205ENST00000595047 PHLDB1Q86UU1 1377 aa28.13■■■□□ 2.09
GTF2F1-205ENST00000595047 CFDP1Q9UEE9 299 aaPredicted RBP28.13■■■□□ 2.09
GTF2F1-205ENST00000595047 KIF13AQ9H1H9 1805 aa28.12■■■□□ 2.09
GTF2F1-205ENST00000595047 EFCAB2Q5VUJ9 269 aa28.11■■■□□ 2.09
GTF2F1-205ENST00000595047 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
GTF2F1-205ENST00000595047 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
GTF2F1-205ENST00000595047 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
GTF2F1-205ENST00000595047 ARHGAP5Q13017 1502 aa28.06■■■□□ 2.08
GTF2F1-205ENST00000595047 TEX14Q8IWB6 1497 aa28.05■■■□□ 2.08
GTF2F1-205ENST00000595047 FANCAO15360 1455 aa28.04■■■□□ 2.08
GTF2F1-205ENST00000595047 ARAP3Q8WWN8 1544 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms