RNA–Protein interactions for RNA: ENST00000594635.6

ELL-202, Transcript of elongation factor for RNA polymerase II, humanhuman

TSL 1 (best)

Gene ELL, Length 4,074 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-202ENST00000594635 DIEXFQ68CQ4 756 aaKnown RBP20.17■□□□□ 0.82
ELL-202ENST00000594635 POLR3GLQ9BT43 218 aa20.17■□□□□ 0.82
ELL-202ENST00000594635 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
ELL-202ENST00000594635 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
ELL-202ENST00000594635 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
ELL-202ENST00000594635 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
ELL-202ENST00000594635 PRXQ9BXM0 1461 aa20.07■□□□□ 0.8
ELL-202ENST00000594635 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
ELL-202ENST00000594635 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
ELL-202ENST00000594635 KIF21BO75037 1637 aa20.03■□□□□ 0.8
ELL-202ENST00000594635 JPH4Q96JJ6 628 aa20.03■□□□□ 0.8
ELL-202ENST00000594635 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
ELL-202ENST00000594635 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
ELL-202ENST00000594635 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
ELL-202ENST00000594635 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
ELL-202ENST00000594635 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
ELL-202ENST00000594635 ARHGAP35Q9NRY4 1499 aa19.97■□□□□ 0.79
ELL-202ENST00000594635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.793e-6■□□□□ 10.5
ELL-202ENST00000594635 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
ELL-202ENST00000594635 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
ELL-202ENST00000594635 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
ELL-202ENST00000594635 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
ELL-202ENST00000594635 FOXD1Q16676 465 aa19.89■□□□□ 0.78
ELL-202ENST00000594635 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
ELL-202ENST00000594635 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
ELL-202ENST00000594635 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
ELL-202ENST00000594635 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
ELL-202ENST00000594635 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
ELL-202ENST00000594635 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
ELL-202ENST00000594635 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
ELL-202ENST00000594635 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
ELL-202ENST00000594635 ZNF644Q9H582 1327 aaPredicted RBP19.81■□□□□ 0.76
ELL-202ENST00000594635 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
ELL-202ENST00000594635 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
ELL-202ENST00000594635 CENPBP07199 599 aaPredicted RBP19.78■□□□□ 0.76
ELL-202ENST00000594635 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
ELL-202ENST00000594635 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
ELL-202ENST00000594635 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
ELL-202ENST00000594635 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
ELL-202ENST00000594635 DDX10Q13206 875 aaKnown RBP19.76■□□□□ 0.75
ELL-202ENST00000594635 KDM2AQ9Y2K7 1162 aa19.76■□□□□ 0.75
ELL-202ENST00000594635 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
ELL-202ENST00000594635 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
ELL-202ENST00000594635 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.752e-6■■■■□ 21.4
ELL-202ENST00000594635 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
ELL-202ENST00000594635 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
ELL-202ENST00000594635 MIER1Q8N108 512 aa19.7■□□□□ 0.74
ELL-202ENST00000594635 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
ELL-202ENST00000594635 RGL3Q3MIN7 710 aa19.68■□□□□ 0.74
ELL-202ENST00000594635 SETD5Q9C0A6 1442 aa19.64■□□□□ 0.74
ELL-202ENST00000594635 PTPRGP23470 1445 aa19.63■□□□□ 0.73
ELL-202ENST00000594635 LRRC9Q6ZRR7 1453 aa19.63■□□□□ 0.73
ELL-202ENST00000594635 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
ELL-202ENST00000594635 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
ELL-202ENST00000594635 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.73
ELL-202ENST00000594635 PRDM2Q13029 1718 aa19.58■□□□□ 0.72
ELL-202ENST00000594635 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
ELL-202ENST00000594635 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
ELL-202ENST00000594635 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
ELL-202ENST00000594635 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
ELL-202ENST00000594635 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
ELL-202ENST00000594635 MPHOSPH9Q99550 1183 aa19.5■□□□□ 0.71
ELL-202ENST00000594635 PLB1Q6P1J6 1458 aa19.49■□□□□ 0.71
ELL-202ENST00000594635 PCF11O94913 1555 aaKnown RBP19.49■□□□□ 0.71
ELL-202ENST00000594635 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
ELL-202ENST00000594635 FGD6Q6ZV73 1430 aa19.48■□□□□ 0.71
ELL-202ENST00000594635 PKD2Q13563 968 aa19.48■□□□□ 0.71
ELL-202ENST00000594635 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
ELL-202ENST00000594635 TIAM1Q13009 1591 aa19.45■□□□□ 0.7
ELL-202ENST00000594635 ANP32CO43423 234 aa19.45■□□□□ 0.7
ELL-202ENST00000594635 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
ELL-202ENST00000594635 KIAA0586Q9BVV6 1533 aa19.43■□□□□ 0.7
ELL-202ENST00000594635 FYCO1Q9BQS8 1478 aa19.42■□□□□ 0.7
ELL-202ENST00000594635 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
ELL-202ENST00000594635 GTF3C3Q9Y5Q9 886 aa19.41■□□□□ 0.7
ELL-202ENST00000594635 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
ELL-202ENST00000594635 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
ELL-202ENST00000594635 CUL7Q14999 1698 aa19.4■□□□□ 0.7
ELL-202ENST00000594635 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
ELL-202ENST00000594635 NUP155O75694 1391 aa19.38■□□□□ 0.69
ELL-202ENST00000594635 GGT6Q6P531 493 aa19.38■□□□□ 0.69
ELL-202ENST00000594635 L3MBTL2Q969R5 705 aa19.37■□□□□ 0.69
ELL-202ENST00000594635 MLECQ14165 292 aa19.36■□□□□ 0.69
ELL-202ENST00000594635 EFCAB2Q5VUJ9 269 aa19.36■□□□□ 0.69
ELL-202ENST00000594635 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
ELL-202ENST00000594635 EFCAB5A4FU69 1503 aa19.36■□□□□ 0.69
ELL-202ENST00000594635 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
ELL-202ENST00000594635 AFAP1Q8N556 730 aa19.35■□□□□ 0.69
ELL-202ENST00000594635 PPP1R15AO75807 674 aaPredicted RBP19.33■□□□□ 0.68
ELL-202ENST00000594635 EIF4G2P78344 907 aaKnown RBP eCLIP19.32■□□□□ 0.688e-7■■■■■ 29.4
ELL-202ENST00000594635 BCANQ96GW7 911 aa19.32■□□□□ 0.68
ELL-202ENST00000594635 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
ELL-202ENST00000594635 EIF4G3O43432 1585 aaKnown RBP19.29■□□□□ 0.68
ELL-202ENST00000594635 KIF3BO15066 747 aa19.29■□□□□ 0.68
ELL-202ENST00000594635 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
ELL-202ENST00000594635 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
ELL-202ENST00000594635 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
ELL-202ENST00000594635 FAM9BQ8IZU0 186 aa19.28■□□□□ 0.68
ELL-202ENST00000594635 ANKRD30AQ9BXX3 1397 aa19.26■□□□□ 0.67
ELL-202ENST00000594635 WDR62O43379 1518 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms